Termite gut associated microvirus 1

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.33

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3G3IST8|A0A3G3IST8_9VIRU DNA pilot protein OS=Termite gut associated microvirus 1 OX=2486188 PE=4 SV=1
MM1 pKa = 7.53SKK3 pKa = 10.46QSVSVDD9 pKa = 3.16DD10 pKa = 3.89VVIYY14 pKa = 9.38SHH16 pKa = 6.69YY17 pKa = 9.68YY18 pKa = 7.31PRR20 pKa = 11.84RR21 pKa = 11.84VPGITFTEE29 pKa = 4.17PTMAQQHH36 pKa = 5.53FRR38 pKa = 11.84DD39 pKa = 3.7EE40 pKa = 4.36CDD42 pKa = 2.78INTIMSRR49 pKa = 11.84YY50 pKa = 8.43EE51 pKa = 3.76RR52 pKa = 11.84TGVLVDD58 pKa = 3.95PLQQRR63 pKa = 11.84TAKK66 pKa = 10.52PMFDD70 pKa = 4.39DD71 pKa = 5.17FSVIPDD77 pKa = 3.45YY78 pKa = 11.48QEE80 pKa = 3.72AQNAIIQARR89 pKa = 11.84YY90 pKa = 9.91LFDD93 pKa = 4.27NLPASIRR100 pKa = 11.84KK101 pKa = 9.16RR102 pKa = 11.84FNNDD106 pKa = 2.89PAQLLDD112 pKa = 5.15FMADD116 pKa = 3.19DD117 pKa = 4.44SNFEE121 pKa = 3.91EE122 pKa = 4.99AVALGIVAKK131 pKa = 10.19PLEE134 pKa = 4.61TPPKK138 pKa = 10.4SEE140 pKa = 5.0DD141 pKa = 3.38KK142 pKa = 10.47PSEE145 pKa = 4.08PEE147 pKa = 4.1VVNKK151 pKa = 10.55DD152 pKa = 3.41VTPP155 pKa = 3.96

Molecular weight: 17.68 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3G3IST8|A0A3G3IST8_9VIRU DNA pilot protein OS=Termite gut associated microvirus 1 OX=2486188 PE=4 SV=1
MM1 pKa = 6.88QVASARR7 pKa = 11.84EE8 pKa = 3.61QMAFQEE14 pKa = 4.01RR15 pKa = 11.84MFRR18 pKa = 11.84NRR20 pKa = 11.84HH21 pKa = 4.18TYY23 pKa = 8.73EE24 pKa = 3.87VEE26 pKa = 3.73DD27 pKa = 4.28LKK29 pKa = 11.19RR30 pKa = 11.84AGLNPILSAHH40 pKa = 6.45SGGSTPSGAMVGGMEE55 pKa = 4.35NVGEE59 pKa = 4.2SAVRR63 pKa = 11.84GFSAAQQASIAKK75 pKa = 9.69DD76 pKa = 3.21QLALNKK82 pKa = 10.28SKK84 pKa = 11.08LEE86 pKa = 3.92SEE88 pKa = 4.25IAVNSATAQRR98 pKa = 11.84QQSEE102 pKa = 4.32SALIKK107 pKa = 10.36SQVDD111 pKa = 3.06SGYY114 pKa = 9.97YY115 pKa = 9.31PSLVGLNNASAQEE128 pKa = 3.87RR129 pKa = 11.84AAQIPLIEE137 pKa = 4.35SSVRR141 pKa = 11.84LNGQRR146 pKa = 11.84ILEE149 pKa = 4.19SDD151 pKa = 3.35ARR153 pKa = 11.84VQQLRR158 pKa = 11.84KK159 pKa = 10.02DD160 pKa = 3.08ISLIEE165 pKa = 3.81EE166 pKa = 4.76RR167 pKa = 11.84IRR169 pKa = 11.84TEE171 pKa = 3.45RR172 pKa = 11.84SLRR175 pKa = 11.84ALNAANTQLTYY186 pKa = 11.08LRR188 pKa = 11.84GALTEE193 pKa = 4.2EE194 pKa = 4.49EE195 pKa = 4.59TRR197 pKa = 11.84TQQNITSLQGYY208 pKa = 8.48LAEE211 pKa = 4.38AQRR214 pKa = 11.84LGIPEE219 pKa = 4.25KK220 pKa = 10.72LIGYY224 pKa = 9.07IKK226 pKa = 10.49YY227 pKa = 10.64SNPRR231 pKa = 11.84LQSLLSQGLTKK242 pKa = 10.47QEE244 pKa = 4.71LYY246 pKa = 10.3PFAIGTGQSLFNSAVEE262 pKa = 4.23KK263 pKa = 10.86ARR265 pKa = 11.84SNLPNRR271 pKa = 11.84VNRR274 pKa = 11.84SHH276 pKa = 7.02KK277 pKa = 10.31RR278 pKa = 3.27

Molecular weight: 30.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1384

91

567

276.8

31.25

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.587 ± 0.93

1.301 ± 0.612

6.431 ± 1.152

5.13 ± 1.047

4.408 ± 0.889

6.72 ± 1.017

2.24 ± 0.567

5.347 ± 0.185

3.251 ± 0.711

7.442 ± 0.825

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.806 ± 0.299

4.697 ± 0.451

5.708 ± 0.952

5.202 ± 0.963

7.514 ± 1.031

7.298 ± 0.897

5.058 ± 0.522

6.792 ± 0.789

1.156 ± 0.463

4.913 ± 0.636
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski