Hubei odonate virus 6

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.36

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KKX6|A0A1L3KKX6_9VIRU Uncharacterized protein OS=Hubei odonate virus 6 OX=1923001 PE=4 SV=1
MM1 pKa = 7.99DD2 pKa = 5.56LLAEE6 pKa = 4.01VWEE9 pKa = 4.54RR10 pKa = 11.84DD11 pKa = 3.37TTLVDD16 pKa = 3.47VLDD19 pKa = 4.61DD20 pKa = 3.96SGIGEE25 pKa = 4.19IPSIQSKK32 pKa = 10.4INAIQEE38 pKa = 4.14EE39 pKa = 4.39QSQQKK44 pKa = 10.23DD45 pKa = 3.34QLDD48 pKa = 4.28SLGHH52 pKa = 5.44TVDD55 pKa = 4.54NNQKK59 pKa = 10.21SNEE62 pKa = 3.71ARR64 pKa = 11.84ILDD67 pKa = 4.64LYY69 pKa = 10.93TNVNSNTRR77 pKa = 11.84DD78 pKa = 3.54LQRR81 pKa = 11.84LEE83 pKa = 4.67QEE85 pKa = 4.57VKK87 pKa = 10.83DD88 pKa = 3.79LTLSIGKK95 pKa = 8.54IQLQMHH101 pKa = 5.93EE102 pKa = 5.02LEE104 pKa = 5.07LKK106 pKa = 10.58VSSNSQIIDD115 pKa = 3.4DD116 pKa = 3.9MTYY119 pKa = 10.95DD120 pKa = 3.78LEE122 pKa = 4.54VVKK125 pKa = 11.16GNVLTLAQDD134 pKa = 3.52MNKK137 pKa = 10.28LNNEE141 pKa = 4.12LLLVKK146 pKa = 10.24PDD148 pKa = 3.39VSEE151 pKa = 4.95LKK153 pKa = 9.91SQNVFTYY160 pKa = 9.78PFSVYY165 pKa = 11.19ANIFLQDD172 pKa = 2.82ICAVYY177 pKa = 10.08EE178 pKa = 4.28GSKK181 pKa = 8.68VTIVDD186 pKa = 3.07IGGSSIEE193 pKa = 4.18YY194 pKa = 7.66QTTTIGSGMGRR205 pKa = 11.84KK206 pKa = 9.12VSSPVKK212 pKa = 8.84YY213 pKa = 9.34VKK215 pKa = 10.19RR216 pKa = 11.84YY217 pKa = 8.27EE218 pKa = 4.09LVPSVVFNKK227 pKa = 10.02KK228 pKa = 8.15VYY230 pKa = 10.28QYY232 pKa = 11.11ISFVGINRR240 pKa = 11.84TTSQPAFSDD249 pKa = 3.83DD250 pKa = 4.88PIVTWGYY257 pKa = 9.37QVIKK261 pKa = 10.63LSNNVNLDD269 pKa = 3.01AMSIMLIKK277 pKa = 9.98EE278 pKa = 3.8AYY280 pKa = 9.87VPVNFSKK287 pKa = 10.69IKK289 pKa = 10.33

Molecular weight: 32.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KKV8|A0A1L3KKV8_9VIRU Uncharacterized protein OS=Hubei odonate virus 6 OX=1923001 PE=4 SV=1
MM1 pKa = 6.98TTRR4 pKa = 11.84KK5 pKa = 9.9CDD7 pKa = 4.4DD8 pKa = 3.51ILRR11 pKa = 11.84KK12 pKa = 9.37EE13 pKa = 4.27PNYY16 pKa = 10.58SRR18 pKa = 11.84QNTTLANDD26 pKa = 3.26INIDD30 pKa = 3.46LKK32 pKa = 10.25RR33 pKa = 11.84RR34 pKa = 11.84KK35 pKa = 9.84RR36 pKa = 11.84ISPYY40 pKa = 10.67LLDD43 pKa = 3.92MLNEE47 pKa = 4.2PVISDD52 pKa = 4.31KK53 pKa = 10.72PVKK56 pKa = 8.91KK57 pKa = 10.53CKK59 pKa = 7.95VARR62 pKa = 11.84MTGHH66 pKa = 5.39TTRR69 pKa = 11.84KK70 pKa = 9.54YY71 pKa = 8.61STKK74 pKa = 10.13TRR76 pKa = 11.84DD77 pKa = 3.64LNSKK81 pKa = 6.71SHH83 pKa = 6.55KK84 pKa = 10.4VMTVTRR90 pKa = 11.84PEE92 pKa = 3.81NRR94 pKa = 11.84QVTVIQKK101 pKa = 9.69VEE103 pKa = 4.02EE104 pKa = 4.17VQPKK108 pKa = 8.15LTCKK112 pKa = 9.07QRR114 pKa = 11.84RR115 pKa = 11.84KK116 pKa = 9.07MRR118 pKa = 11.84SSLRR122 pKa = 11.84ICLYY126 pKa = 10.92NKK128 pKa = 9.8ANKK131 pKa = 10.16GKK133 pKa = 8.0TLLEE137 pKa = 4.04NKK139 pKa = 8.63TWVEE143 pKa = 4.26KK144 pKa = 10.57IAISDD149 pKa = 3.49RR150 pKa = 11.84DD151 pKa = 3.74QVPEE155 pKa = 5.48AIQQCYY161 pKa = 9.5IPPPRR166 pKa = 11.84KK167 pKa = 9.17QSYY170 pKa = 8.65EE171 pKa = 4.06RR172 pKa = 11.84IVPGRR177 pKa = 11.84VNLNTIDD184 pKa = 4.66YY185 pKa = 7.76EE186 pKa = 4.65VHH188 pKa = 7.32DD189 pKa = 4.43NWTKK193 pKa = 11.06LSDD196 pKa = 3.36QDD198 pKa = 3.97VGVKK202 pKa = 9.76FSKK205 pKa = 10.66RR206 pKa = 11.84MTHH209 pKa = 6.61NSDD212 pKa = 3.14EE213 pKa = 4.31NALSKK218 pKa = 10.92LFAEE222 pKa = 4.32IRR224 pKa = 11.84KK225 pKa = 8.78EE226 pKa = 3.91FSEE229 pKa = 4.53TEE231 pKa = 3.94LEE233 pKa = 4.19RR234 pKa = 11.84KK235 pKa = 9.54VRR237 pKa = 11.84EE238 pKa = 3.81QVKK241 pKa = 10.6DD242 pKa = 3.48VTQTLLSTQNATVDD256 pKa = 3.59RR257 pKa = 11.84LIKK260 pKa = 10.26EE261 pKa = 4.2VVALRR266 pKa = 11.84EE267 pKa = 3.92EE268 pKa = 4.42LNRR271 pKa = 11.84ANAEE275 pKa = 4.11VASLKK280 pKa = 10.53RR281 pKa = 11.84KK282 pKa = 10.28LEE284 pKa = 4.14VIPEE288 pKa = 4.02VEE290 pKa = 4.33QQCSVVVPSTTIPTRR305 pKa = 11.84LLPLKK310 pKa = 10.19KK311 pKa = 10.25RR312 pKa = 11.84IIAEE316 pKa = 3.85VSKK319 pKa = 11.28ADD321 pKa = 3.5TTIVSEE327 pKa = 4.25PEE329 pKa = 3.79KK330 pKa = 10.76VNPVIKK336 pKa = 10.43KK337 pKa = 6.63VTPKK341 pKa = 10.75VIVSPKK347 pKa = 9.63IDD349 pKa = 3.09VKK351 pKa = 11.61ANVQIDD357 pKa = 3.86DD358 pKa = 4.62EE359 pKa = 4.81KK360 pKa = 11.24PSTSKK365 pKa = 10.51QALIKK370 pKa = 9.76TNSEE374 pKa = 4.09VASEE378 pKa = 3.94IAKK381 pKa = 8.76VQKK384 pKa = 10.14PSEE387 pKa = 3.96IVIKK391 pKa = 10.57QKK393 pKa = 11.12SDD395 pKa = 3.16LTFEE399 pKa = 4.3SRR401 pKa = 11.84VIPKK405 pKa = 10.02IKK407 pKa = 9.2EE408 pKa = 4.15TYY410 pKa = 8.01TDD412 pKa = 3.65RR413 pKa = 11.84DD414 pKa = 2.76IDD416 pKa = 3.41MWIDD420 pKa = 3.62FNLKK424 pKa = 10.42NEE426 pKa = 4.18DD427 pKa = 3.44VRR429 pKa = 11.84KK430 pKa = 10.35KK431 pKa = 10.66EE432 pKa = 4.01ILDD435 pKa = 3.77SLIEE439 pKa = 4.48DD440 pKa = 4.15DD441 pKa = 5.8KK442 pKa = 12.0SFASLFDD449 pKa = 3.4KK450 pKa = 10.73HH451 pKa = 6.86ASPTQRR457 pKa = 11.84LNFAKK462 pKa = 10.3LGCEE466 pKa = 3.95SSRR469 pKa = 11.84ARR471 pKa = 11.84INAQDD476 pKa = 3.38INRR479 pKa = 11.84FTWTKK484 pKa = 9.92ICAKK488 pKa = 9.84HH489 pKa = 5.45KK490 pKa = 9.4TDD492 pKa = 3.61AEE494 pKa = 4.2RR495 pKa = 11.84KK496 pKa = 8.96VEE498 pKa = 3.96CDD500 pKa = 3.48KK501 pKa = 11.14IRR503 pKa = 11.84ATLFRR508 pKa = 11.84TLFFRR513 pKa = 11.84KK514 pKa = 8.88QAEE517 pKa = 4.35FKK519 pKa = 10.54KK520 pKa = 10.95LNLGVVNPCLIGVNRR535 pKa = 11.84WITKK539 pKa = 9.84LLSLKK544 pKa = 9.16TAEE547 pKa = 3.57EE548 pKa = 4.17RR549 pKa = 11.84IYY551 pKa = 10.98FRR553 pKa = 11.84TSWNNKK559 pKa = 7.29VDD561 pKa = 4.47AITIRR566 pKa = 11.84LQNLAKK572 pKa = 10.24QKK574 pKa = 10.7CC575 pKa = 3.45

Molecular weight: 66.47 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

3826

289

1991

956.5

108.01

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.829 ± 0.55

1.464 ± 0.194

5.567 ± 0.395

6.325 ± 0.307

3.999 ± 0.533

5.018 ± 0.99

1.777 ± 0.5

6.926 ± 0.438

7.188 ± 1.33

9.2 ± 0.829

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.934 ± 0.164

5.227 ± 0.384

4.339 ± 0.926

4.182 ± 0.392

4.861 ± 0.732

7.371 ± 0.317

6.717 ± 0.656

7.527 ± 0.566

1.176 ± 0.138

3.372 ± 0.488
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski