Streptococcus satellite phage Javan279

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 7.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 18 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZI14|A0A4D5ZI14_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan279 OX=2558602 GN=JavanS279_0006 PE=4 SV=1
MM1 pKa = 7.82ADD3 pKa = 4.14KK4 pKa = 11.05KK5 pKa = 11.09DD6 pKa = 3.37FDD8 pKa = 4.66LANEE12 pKa = 3.94RR13 pKa = 11.84AKK15 pKa = 11.2NFGIWLEE22 pKa = 4.04EE23 pKa = 4.33AYY25 pKa = 8.85QTMLDD30 pKa = 4.45FSLEE34 pKa = 4.24DD35 pKa = 4.04KK36 pKa = 10.56FDD38 pKa = 4.03CYY40 pKa = 11.03SIEE43 pKa = 4.08EE44 pKa = 4.21RR45 pKa = 11.84NQLEE49 pKa = 4.34RR50 pKa = 11.84VLEE53 pKa = 4.07TLMDD57 pKa = 4.18FCDD60 pKa = 3.07MWEE63 pKa = 4.02RR64 pKa = 11.84GQIILASKK72 pKa = 9.62EE73 pKa = 3.85RR74 pKa = 11.84EE75 pKa = 4.13AIEE78 pKa = 3.87

Molecular weight: 9.38 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZHP1|A0A4D5ZHP1_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan279 OX=2558602 GN=JavanS279_0008 PE=4 SV=1
MM1 pKa = 7.78KK2 pKa = 10.59LPTLPEE8 pKa = 3.71NYY10 pKa = 9.48KK11 pKa = 10.42RR12 pKa = 11.84VLALIPQGAEE22 pKa = 3.44RR23 pKa = 11.84PRR25 pKa = 11.84AGKK28 pKa = 10.2EE29 pKa = 3.73IVKK32 pKa = 8.96LTGLDD37 pKa = 2.96IRR39 pKa = 11.84TVRR42 pKa = 11.84GIIRR46 pKa = 11.84GLVIKK51 pKa = 8.25YY52 pKa = 9.67HH53 pKa = 5.96IAICGSRR60 pKa = 11.84DD61 pKa = 3.31LAGGYY66 pKa = 8.04YY67 pKa = 9.75IPANDD72 pKa = 3.72SEE74 pKa = 4.4RR75 pKa = 11.84LAGIRR80 pKa = 11.84ALDD83 pKa = 3.66RR84 pKa = 11.84QRR86 pKa = 11.84QDD88 pKa = 2.9EE89 pKa = 4.25QKK91 pKa = 10.55RR92 pKa = 11.84ISALMYY98 pKa = 10.81ADD100 pKa = 5.64LNEE103 pKa = 3.71QDD105 pKa = 4.95KK106 pKa = 10.69YY107 pKa = 11.77LKK109 pKa = 10.82GSS111 pKa = 3.38

Molecular weight: 12.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18

0

18

2735

39

381

151.9

17.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.837 ± 0.539

0.585 ± 0.147

5.155 ± 0.527

7.861 ± 0.624

4.168 ± 0.407

4.534 ± 0.468

1.463 ± 0.29

7.313 ± 0.442

9.543 ± 0.368

11.517 ± 0.775

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.413 ± 0.368

5.631 ± 0.704

2.523 ± 0.261

4.973 ± 0.428

4.68 ± 0.523

5.046 ± 0.278

5.887 ± 0.675

4.424 ± 0.442

1.133 ± 0.219

4.314 ± 0.197
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski