Aureimonas ureilytica

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Aurantimonadaceae; Aureimonas

Average proteome isoelectric point is 6.51

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4329 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A175RRL6|A0A175RRL6_9RHIZ ABC transporter permease OS=Aureimonas ureilytica OX=401562 GN=NS365_07690 PE=4 SV=1
MM1 pKa = 7.44SVFKK5 pKa = 10.38STTDD9 pKa = 2.68ATTALKK15 pKa = 9.58FAQMAQAAYY24 pKa = 8.93YY25 pKa = 10.74DD26 pKa = 3.98WMVPPAGWTAVTMGQLGLGNGSNDD50 pKa = 3.93ASTVWHH56 pKa = 6.42GAFGTGAQARR66 pKa = 11.84VFTNGTEE73 pKa = 4.1VTVAIAGTQTDD84 pKa = 4.31NYY86 pKa = 9.73QMGYY90 pKa = 9.87ADD92 pKa = 3.25WMQNVRR98 pKa = 11.84VGQGLTDD105 pKa = 3.45YY106 pKa = 10.5KK107 pKa = 11.28LNFIALVDD115 pKa = 3.75AVKK118 pKa = 9.93TFSEE122 pKa = 4.98APATDD127 pKa = 3.7LAVSFTGHH135 pKa = 6.19SLGAAAVNQIAEE147 pKa = 4.46SNAFGQLPSTTKK159 pKa = 10.48YY160 pKa = 10.73YY161 pKa = 10.91GFEE164 pKa = 3.89SPYY167 pKa = 10.64VFNPPASHH175 pKa = 5.99QAHH178 pKa = 6.34GDD180 pKa = 3.5VMNWGVEE187 pKa = 3.85FDD189 pKa = 4.06LVSGLGLGSGNPEE202 pKa = 3.92YY203 pKa = 10.92GQNIYY208 pKa = 10.64LKK210 pKa = 10.22SDD212 pKa = 3.92FGLTSDD218 pKa = 4.65LFTVHH223 pKa = 7.05SIDD226 pKa = 3.43TQVRR230 pKa = 11.84IIEE233 pKa = 4.68TINKK237 pKa = 9.47SAFFTEE243 pKa = 4.78LNTPATPNEE252 pKa = 4.24SPSTVFITDD261 pKa = 2.98QYY263 pKa = 11.83GFGNHH268 pKa = 6.7DD269 pKa = 3.88FSGSIPMDD277 pKa = 3.51GAYY280 pKa = 9.67IIGSNNWEE288 pKa = 4.46RR289 pKa = 11.84ITGSIHH295 pKa = 7.94DD296 pKa = 4.55DD297 pKa = 4.05RR298 pKa = 11.84IDD300 pKa = 3.69GGGGNDD306 pKa = 4.16IIIGGAGEE314 pKa = 5.01DD315 pKa = 3.4IVAGGGGADD324 pKa = 3.22TFIFSSVPVDD334 pKa = 3.22GLPNVFSPEE343 pKa = 3.72LDD345 pKa = 3.54FVKK348 pKa = 10.38DD349 pKa = 3.96FQVMAYY355 pKa = 9.47EE356 pKa = 4.99GQWNWNPDD364 pKa = 2.91TMEE367 pKa = 4.13WVWQGGFIKK376 pKa = 10.58DD377 pKa = 4.15VIDD380 pKa = 3.59LTAVRR385 pKa = 11.84GIADD389 pKa = 3.71FQGFAAALEE398 pKa = 4.23DD399 pKa = 3.7TAAGLRR405 pKa = 11.84IEE407 pKa = 4.99GSHH410 pKa = 5.98DD411 pKa = 3.52TIYY414 pKa = 10.96LQGVTKK420 pKa = 11.02LEE422 pKa = 4.14MLGSFQDD429 pKa = 3.49LGGGFMFSEE438 pKa = 4.15NVRR441 pKa = 11.84YY442 pKa = 9.95NSSPYY447 pKa = 9.89MSGNPYY453 pKa = 9.37MSSEE457 pKa = 4.15INQAMTGQINGYY469 pKa = 10.12DD470 pKa = 3.99DD471 pKa = 3.75NTLSSEE477 pKa = 4.34LVYY480 pKa = 11.08SADD483 pKa = 3.52PVNNPLGFSIASDD496 pKa = 3.73GTYY499 pKa = 8.15TWSYY503 pKa = 10.06SGPPIPTDD511 pKa = 3.59GSAYY515 pKa = 10.1GYY517 pKa = 10.93AEE519 pKa = 4.21EE520 pKa = 4.24AHH522 pKa = 5.48VTIIDD527 pKa = 3.72KK528 pKa = 11.09YY529 pKa = 9.61GAEE532 pKa = 4.23SDD534 pKa = 3.59VTLYY538 pKa = 9.49GTFYY542 pKa = 10.7SYY544 pKa = 11.6GMAA547 pKa = 4.36

Molecular weight: 58.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A175RIC6|A0A175RIC6_9RHIZ GDP-mannose 4 6-dehydratase OS=Aureimonas ureilytica OX=401562 GN=gmd PE=3 SV=1
MM1 pKa = 7.91RR2 pKa = 11.84SNHH5 pKa = 5.7LRR7 pKa = 11.84PPRR10 pKa = 11.84GRR12 pKa = 11.84LHH14 pKa = 6.13RR15 pKa = 11.84TLHH18 pKa = 6.02RR19 pKa = 11.84RR20 pKa = 11.84GNPLLILHH28 pKa = 6.61LRR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84LPQNPPSRR40 pKa = 11.84PLASDD45 pKa = 3.36RR46 pKa = 11.84HH47 pKa = 5.68RR48 pKa = 11.84PSDD51 pKa = 3.31QRR53 pKa = 11.84RR54 pKa = 11.84RR55 pKa = 11.84SLTHH59 pKa = 5.35RR60 pKa = 11.84RR61 pKa = 11.84SRR63 pKa = 11.84KK64 pKa = 9.16RR65 pKa = 11.84PPATRR70 pKa = 11.84QPRR73 pKa = 11.84PPRR76 pKa = 11.84PTT78 pKa = 3.13

Molecular weight: 9.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4329

0

4329

1349042

27

5832

311.6

33.72

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.812 ± 0.042

0.763 ± 0.011

5.615 ± 0.032

5.895 ± 0.037

3.816 ± 0.026

8.775 ± 0.037

1.957 ± 0.018

4.907 ± 0.028

2.878 ± 0.031

10.55 ± 0.051

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.366 ± 0.019

2.35 ± 0.025

5.231 ± 0.034

2.983 ± 0.025

7.611 ± 0.041

5.662 ± 0.03

5.181 ± 0.022

7.367 ± 0.033

1.244 ± 0.015

2.037 ± 0.017
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski