Howler monkey associated porprismacovirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus

Average proteome isoelectric point is 6.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B5GP05|A0A0B5GP05_9VIRU Rep protein OS=Howler monkey associated porprismacovirus 1 OX=2170112 GN=rep PE=4 SV=1
MM1 pKa = 7.63GLRR4 pKa = 11.84RR5 pKa = 11.84NIPTAPMLTALWPALLGISLKK26 pKa = 10.61ARR28 pKa = 11.84NIFTDD33 pKa = 4.49FTSDD37 pKa = 3.17NMATNRR43 pKa = 11.84AYY45 pKa = 10.53ASFQEE50 pKa = 4.64IYY52 pKa = 10.64DD53 pKa = 3.36FHH55 pKa = 7.65TEE57 pKa = 3.83VGNTTLIEE65 pKa = 4.06VHH67 pKa = 6.0TPISDD72 pKa = 3.93LPQRR76 pKa = 11.84MLNGFFTQFRR86 pKa = 11.84KK87 pKa = 9.94FKK89 pKa = 10.6YY90 pKa = 10.0AGADD94 pKa = 3.34VTLVPVSTLPADD106 pKa = 3.98PLQISYY112 pKa = 10.45EE113 pKa = 4.07AGEE116 pKa = 4.09PTIDD120 pKa = 3.8PRR122 pKa = 11.84DD123 pKa = 3.72MVNPILWKK131 pKa = 10.26GMSGASMGRR140 pKa = 11.84FLDD143 pKa = 4.76AIFGSHH149 pKa = 7.37RR150 pKa = 11.84IYY152 pKa = 10.7SAQALGDD159 pKa = 3.75VMDD162 pKa = 5.09NSPASEE168 pKa = 3.85TDD170 pKa = 4.25FYY172 pKa = 11.67QLFGDD177 pKa = 4.06SLSISEE183 pKa = 4.29STVFKK188 pKa = 11.07ALTDD192 pKa = 4.05PDD194 pKa = 3.61AVAALEE200 pKa = 3.78AMYY203 pKa = 10.7YY204 pKa = 9.99QGLADD209 pKa = 3.98NSWNKK214 pKa = 10.71AGVQTGFKK222 pKa = 10.3KK223 pKa = 10.49RR224 pKa = 11.84GLFPLVWKK232 pKa = 10.23SASNLFRR239 pKa = 11.84PANQNSPPNPTGTGTPWVPATNVDD263 pKa = 3.51DD264 pKa = 4.17YY265 pKa = 12.07NNYY268 pKa = 10.46GYY270 pKa = 10.68DD271 pKa = 3.53QIHH274 pKa = 6.65EE275 pKa = 4.57SGSPLTPSVGVGIAGGQFSNGTTRR299 pKa = 11.84LGWMPTQTSYY309 pKa = 11.91GMVGTQPSIANAVNGAQDD327 pKa = 3.64MTILPLIPMMMIILPPAYY345 pKa = 8.19KK346 pKa = 9.62TEE348 pKa = 3.83MYY350 pKa = 10.12FRR352 pKa = 11.84MVIKK356 pKa = 10.44HH357 pKa = 5.6KK358 pKa = 11.14FEE360 pKa = 4.13FAEE363 pKa = 4.37FANTVGPDD371 pKa = 3.32TFSNNQNVSPAFIYY385 pKa = 10.78TNVTSGASVATTTEE399 pKa = 4.15EE400 pKa = 3.78QPKK403 pKa = 10.16IVTAGVAA410 pKa = 3.17

Molecular weight: 44.64 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B5GP05|A0A0B5GP05_9VIRU Rep protein OS=Howler monkey associated porprismacovirus 1 OX=2170112 GN=rep PE=4 SV=1
MM1 pKa = 7.14STTASRR7 pKa = 11.84QWSTKK12 pKa = 7.34MSQMYY17 pKa = 9.38MLTIPRR23 pKa = 11.84DD24 pKa = 3.61KK25 pKa = 10.75VSKK28 pKa = 10.28RR29 pKa = 11.84EE30 pKa = 3.91LRR32 pKa = 11.84IMLDD36 pKa = 3.67KK37 pKa = 11.05NDD39 pKa = 3.76CKK41 pKa = 10.81KK42 pKa = 10.12WIIGKK47 pKa = 7.57EE48 pKa = 4.07TGKK51 pKa = 10.3NGYY54 pKa = 8.27KK55 pKa = 9.59HH56 pKa = 4.31WQIRR60 pKa = 11.84LEE62 pKa = 4.12TSNEE66 pKa = 3.89EE67 pKa = 3.92FFDD70 pKa = 3.44WCKK73 pKa = 10.98KK74 pKa = 9.96HH75 pKa = 6.73IPTASIRR82 pKa = 11.84KK83 pKa = 9.58AEE85 pKa = 4.12VPKK88 pKa = 9.91WDD90 pKa = 3.73YY91 pKa = 10.08EE92 pKa = 4.29AKK94 pKa = 10.29EE95 pKa = 4.08GQYY98 pKa = 7.49WTSSDD103 pKa = 3.39RR104 pKa = 11.84TDD106 pKa = 3.91NLIQRR111 pKa = 11.84FGEE114 pKa = 3.8FRR116 pKa = 11.84PNQKK120 pKa = 10.02RR121 pKa = 11.84AIQALRR127 pKa = 11.84ATNDD131 pKa = 3.24RR132 pKa = 11.84EE133 pKa = 4.13VLVWYY138 pKa = 10.07DD139 pKa = 3.09EE140 pKa = 4.29GGNVGKK146 pKa = 10.25SWFTGALWEE155 pKa = 4.39RR156 pKa = 11.84GQAYY160 pKa = 7.24VTPPTVSTVQAMVQFVASLYY180 pKa = 10.56CAIEE184 pKa = 4.28SIKK187 pKa = 11.02DD188 pKa = 3.25GLVYY192 pKa = 10.58DD193 pKa = 3.63SRR195 pKa = 11.84YY196 pKa = 8.17QGRR199 pKa = 11.84MVNIRR204 pKa = 11.84GVKK207 pKa = 9.51IIVMTNNKK215 pKa = 9.0PDD217 pKa = 4.21LDD219 pKa = 3.88KK220 pKa = 11.35LSYY223 pKa = 10.57DD224 pKa = 3.15RR225 pKa = 11.84WRR227 pKa = 11.84MVVLL231 pKa = 4.26

Molecular weight: 27.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

641

231

410

320.5

35.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.8 ± 1.606

0.468 ± 0.512

5.46 ± 0.37

4.212 ± 0.872

4.524 ± 1.187

7.02 ± 0.858

1.092 ± 0.139

5.616 ± 0.274

5.148 ± 2.163

6.396 ± 0.474

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

4.056 ± 0.099

5.46 ± 0.697

5.928 ± 1.786

4.212 ± 0.339

4.836 ± 1.821

7.02 ± 0.325

8.112 ± 0.998

6.24 ± 0.423

2.496 ± 1.129

3.9 ± 0.264
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski