Beihai sobemo-like virus 10

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KE98|A0A1L3KE98_9VIRU RNA-directed RNA polymerase OS=Beihai sobemo-like virus 10 OX=1922681 PE=4 SV=1
MM1 pKa = 7.45ISSIAEE7 pKa = 3.71FLGNQLLLPFDD18 pKa = 3.9KK19 pKa = 11.17VVGLVAEE26 pKa = 4.42KK27 pKa = 10.93GKK29 pKa = 10.09LQVPTRR35 pKa = 11.84EE36 pKa = 4.05SFLGYY41 pKa = 10.54VVMAALTLAIAEE53 pKa = 4.53FFRR56 pKa = 11.84AHH58 pKa = 6.65GNLCGRR64 pKa = 11.84AYY66 pKa = 10.76GHH68 pKa = 6.67FLGACASLWKK78 pKa = 10.49YY79 pKa = 10.64CVDD82 pKa = 3.34RR83 pKa = 11.84MQRR86 pKa = 11.84PATGDD91 pKa = 3.34VASQRR96 pKa = 11.84FGYY99 pKa = 8.81FQHH102 pKa = 7.05GDD104 pKa = 2.91EE105 pKa = 5.0HH106 pKa = 6.48YY107 pKa = 8.35WRR109 pKa = 11.84CRR111 pKa = 11.84RR112 pKa = 11.84TSKK115 pKa = 10.66LYY117 pKa = 10.01RR118 pKa = 11.84VEE120 pKa = 4.05PGRR123 pKa = 11.84GQFYY127 pKa = 10.36IDD129 pKa = 3.67DD130 pKa = 4.6AGVEE134 pKa = 4.32QYY136 pKa = 11.41EE137 pKa = 4.44VMDD140 pKa = 4.4YY141 pKa = 11.06IHH143 pKa = 6.73VLVQGSEE150 pKa = 4.39LIQPEE155 pKa = 4.13ANLLHH160 pKa = 6.85GEE162 pKa = 4.21VPLPFEE168 pKa = 4.65GLHH171 pKa = 6.06KK172 pKa = 10.7SVVAIFQKK180 pKa = 10.43NHH182 pKa = 6.69DD183 pKa = 4.05GEE185 pKa = 4.56FAQVGHH191 pKa = 5.84GHH193 pKa = 6.64RR194 pKa = 11.84CGDD197 pKa = 3.55YY198 pKa = 10.85LFTNAHH204 pKa = 4.93VHH206 pKa = 6.58DD207 pKa = 4.37ATNGDD212 pKa = 3.98VYY214 pKa = 10.81FSKK217 pKa = 10.57DD218 pKa = 3.39LKK220 pKa = 10.95KK221 pKa = 10.11FWPVGEE227 pKa = 3.73FTYY230 pKa = 10.16FVKK233 pKa = 10.67NYY235 pKa = 10.52SKK237 pKa = 10.62ATGNDD242 pKa = 2.71LGAYY246 pKa = 8.2FVSRR250 pKa = 11.84GTWAASGVSTFQATNYY266 pKa = 8.23WPQSEE271 pKa = 4.04GRR273 pKa = 11.84IEE275 pKa = 3.57ITAYY279 pKa = 10.43DD280 pKa = 4.08DD281 pKa = 3.62VRR283 pKa = 11.84GKK285 pKa = 10.34HH286 pKa = 5.91MIAKK290 pKa = 8.69GHH292 pKa = 6.3VYY294 pKa = 10.51NQTLVDD300 pKa = 4.05AKK302 pKa = 10.82LGMVPHH308 pKa = 6.36SAITKK313 pKa = 8.36VGWSGAPVFMMKK325 pKa = 10.0GQKK328 pKa = 8.48RR329 pKa = 11.84TIVGIHH335 pKa = 6.66CGGGSDD341 pKa = 4.31GSANYY346 pKa = 10.04ACSIYY351 pKa = 10.68EE352 pKa = 3.7LLEE355 pKa = 3.57FRR357 pKa = 11.84RR358 pKa = 11.84RR359 pKa = 11.84LGLEE363 pKa = 3.46PKK365 pKa = 10.18IPLVCEE371 pKa = 4.17AKK373 pKa = 10.61FISPPSKK380 pKa = 8.93TKK382 pKa = 10.56QFDD385 pKa = 3.7RR386 pKa = 11.84YY387 pKa = 10.57DD388 pKa = 3.59EE389 pKa = 4.39EE390 pKa = 4.9SPEE393 pKa = 3.81EE394 pKa = 3.93RR395 pKa = 11.84EE396 pKa = 3.9RR397 pKa = 11.84RR398 pKa = 11.84EE399 pKa = 3.85DD400 pKa = 3.63SEE402 pKa = 4.19MLTRR406 pKa = 11.84EE407 pKa = 4.23AEE409 pKa = 4.12EE410 pKa = 4.32HH411 pKa = 4.68VTEE414 pKa = 4.61LLHH417 pKa = 7.81GEE419 pKa = 4.23ANSPPKK425 pKa = 10.22KK426 pKa = 10.34DD427 pKa = 3.42ISPEE431 pKa = 3.81AKK433 pKa = 10.4LPGPTWYY440 pKa = 9.61EE441 pKa = 3.8HH442 pKa = 5.79CHH444 pKa = 5.68IDD446 pKa = 4.93APHH449 pKa = 6.42SPAGTLVLHH458 pKa = 6.95LADD461 pKa = 5.29DD462 pKa = 4.22VANMADD468 pKa = 5.61LEE470 pKa = 4.65DD471 pKa = 5.58LDD473 pKa = 5.45IPDD476 pKa = 5.37GPPSSPDD483 pKa = 3.4PDD485 pKa = 4.39LDD487 pKa = 4.24GGAADD492 pKa = 3.48VHH494 pKa = 6.58VNAVLAEE501 pKa = 4.15YY502 pKa = 10.26ILRR505 pKa = 11.84ARR507 pKa = 11.84AINEE511 pKa = 4.18EE512 pKa = 4.28VGPPPGLFPSLSEE525 pKa = 4.17AEE527 pKa = 4.22PPEE530 pKa = 4.47VPQEE534 pKa = 3.8EE535 pKa = 4.9HH536 pKa = 6.59EE537 pKa = 4.35PEE539 pKa = 3.99EE540 pKa = 4.52HH541 pKa = 6.78GGLSEE546 pKa = 5.02PIYY549 pKa = 10.02MGNPQGEE556 pKa = 4.59PVTLGPQISPEE567 pKa = 3.81EE568 pKa = 4.11RR569 pKa = 11.84EE570 pKa = 4.03RR571 pKa = 11.84GQKK574 pKa = 8.41TFEE577 pKa = 4.22SRR579 pKa = 11.84ASRR582 pKa = 11.84PLWAKK587 pKa = 10.41AFLGVGLLGATALSPSGRR605 pKa = 11.84AVTDD609 pKa = 3.56EE610 pKa = 4.25KK611 pKa = 11.31ARR613 pKa = 11.84SLLRR617 pKa = 11.84CSPQDD622 pKa = 3.32LAEE625 pKa = 4.16ARR627 pKa = 11.84KK628 pKa = 8.24MCPISLLATPAFDD641 pKa = 4.35RR642 pKa = 11.84YY643 pKa = 10.13RR644 pKa = 11.84GYY646 pKa = 10.83LGSGDD651 pKa = 3.71VDD653 pKa = 3.31WVNFEE658 pKa = 3.77SHH660 pKa = 7.04KK661 pKa = 10.59IVNQSNVTVAATVGTSRR678 pKa = 11.84LYY680 pKa = 11.03SKK682 pKa = 7.76EE683 pKa = 4.15TPLTKK688 pKa = 10.61LPGRR692 pKa = 11.84YY693 pKa = 8.53RR694 pKa = 11.84EE695 pKa = 4.52VISEE699 pKa = 4.06MGLGPEE705 pKa = 4.47QGFEE709 pKa = 4.45DD710 pKa = 4.64YY711 pKa = 11.7VMPPSGAEE719 pKa = 3.69AVKK722 pKa = 10.57EE723 pKa = 4.11SLEE726 pKa = 4.2SQLNATCHH734 pKa = 5.49EE735 pKa = 4.29PWPKK739 pKa = 10.37EE740 pKa = 3.66VLEE743 pKa = 4.4RR744 pKa = 11.84DD745 pKa = 3.12GGNYY749 pKa = 9.92LRR751 pKa = 11.84DD752 pKa = 3.88EE753 pKa = 4.41LHH755 pKa = 6.69SEE757 pKa = 3.8AGKK760 pKa = 10.93YY761 pKa = 9.38PLAFSSGISQVHH773 pKa = 6.24DD774 pKa = 3.55FVVKK778 pKa = 10.31LAKK781 pKa = 10.5EE782 pKa = 3.85FDD784 pKa = 3.91GTKK787 pKa = 10.07SSGWSAHH794 pKa = 5.17YY795 pKa = 10.52RR796 pKa = 11.84PGPKK800 pKa = 9.74SAWQCAEE807 pKa = 3.7GLEE810 pKa = 4.38TASYY814 pKa = 10.73LVRR817 pKa = 11.84CRR819 pKa = 11.84LLLRR823 pKa = 11.84LAWGAHH829 pKa = 5.35EE830 pKa = 4.26MSKK833 pKa = 7.89MTPEE837 pKa = 3.75QMVQNGLSDD846 pKa = 3.88PKK848 pKa = 10.37VASIKK853 pKa = 10.41SEE855 pKa = 3.52PHH857 pKa = 6.05APRR860 pKa = 11.84KK861 pKa = 9.25AANKK865 pKa = 7.88KK866 pKa = 8.24WRR868 pKa = 11.84VIWGASIIDD877 pKa = 4.2LLAQGVTCRR886 pKa = 11.84IQDD889 pKa = 3.39KK890 pKa = 11.03LDD892 pKa = 2.95IHH894 pKa = 7.02SYY896 pKa = 10.4QDD898 pKa = 3.02GTGQHH903 pKa = 5.57SQAVGLGHH911 pKa = 6.65HH912 pKa = 7.2PEE914 pKa = 5.29GIQMIGKK921 pKa = 9.25HH922 pKa = 5.26IEE924 pKa = 3.74RR925 pKa = 11.84LQATGHH931 pKa = 5.43QLFDD935 pKa = 4.16ADD937 pKa = 3.61ASGWDD942 pKa = 3.43MSVKK946 pKa = 9.96RR947 pKa = 11.84DD948 pKa = 4.03SILMDD953 pKa = 3.29AEE955 pKa = 3.94RR956 pKa = 11.84RR957 pKa = 11.84IRR959 pKa = 11.84CYY961 pKa = 9.96VGPYY965 pKa = 9.97HH966 pKa = 7.17EE967 pKa = 5.32IFAALQMAEE976 pKa = 3.92AMTNSAHH983 pKa = 5.91MLAFGPYY990 pKa = 9.9LFSIYY995 pKa = 10.23LAGITASGILPTTSQNSFMRR1015 pKa = 11.84AFIARR1020 pKa = 11.84LVGIIATLCGGDD1032 pKa = 4.03DD1033 pKa = 3.92LMGAGKK1039 pKa = 10.07FDD1041 pKa = 3.77PAYY1044 pKa = 9.59EE1045 pKa = 4.03RR1046 pKa = 11.84RR1047 pKa = 11.84FGPIEE1052 pKa = 3.85KK1053 pKa = 10.02KK1054 pKa = 8.34ITYY1057 pKa = 9.39RR1058 pKa = 11.84EE1059 pKa = 3.7QGEE1062 pKa = 4.39PIEE1065 pKa = 4.19FTSFLFRR1072 pKa = 11.84KK1073 pKa = 9.7EE1074 pKa = 3.8NGVWKK1079 pKa = 10.57ADD1081 pKa = 3.55FVNLGKK1087 pKa = 10.28SCAKK1091 pKa = 10.18LAFSSKK1097 pKa = 10.22PVTPDD1102 pKa = 2.81QLGGVLYY1109 pKa = 10.37HH1110 pKa = 7.05LRR1112 pKa = 11.84DD1113 pKa = 3.74NEE1115 pKa = 4.59SNASLFRR1122 pKa = 11.84EE1123 pKa = 4.68ICRR1126 pKa = 11.84KK1127 pKa = 8.8MDD1129 pKa = 3.21WPIEE1133 pKa = 4.0GAIAGPDD1140 pKa = 3.56GDD1142 pKa = 3.95QGG1144 pKa = 3.58

Molecular weight: 126.43 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KE98|A0A1L3KE98_9VIRU RNA-directed RNA polymerase OS=Beihai sobemo-like virus 10 OX=1922681 PE=4 SV=1
MM1 pKa = 7.4SSKK4 pKa = 10.26GRR6 pKa = 11.84QARR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84NRR13 pKa = 11.84RR14 pKa = 11.84AAAQPRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84HH23 pKa = 5.26LKK25 pKa = 9.98GPGGGAMSRR34 pKa = 11.84GSRR37 pKa = 11.84PTNRR41 pKa = 11.84SHH43 pKa = 6.31ATNVLATGVAAAPKK57 pKa = 9.88KK58 pKa = 10.9AFGCTIGHH66 pKa = 6.46TLHH69 pKa = 6.82CWDD72 pKa = 4.72AKK74 pKa = 10.61HH75 pKa = 6.05PHH77 pKa = 6.69HH78 pKa = 7.02LPLPRR83 pKa = 11.84AVGPYY88 pKa = 8.84TVIRR92 pKa = 11.84ATKK95 pKa = 9.93RR96 pKa = 11.84ITSGRR101 pKa = 11.84AANIIGSFQFKK112 pKa = 10.27DD113 pKa = 3.95GASTTPDD120 pKa = 3.07FGNWSEE126 pKa = 4.46TIMVSDD132 pKa = 4.53VNPTAPINQSNNTFASSVEE151 pKa = 3.99LGGLGAAATLVPSALSVQIMCPTALQTASGVIYY184 pKa = 10.29AGVMNTQAALAGRR197 pKa = 11.84TEE199 pKa = 3.95TWFSYY204 pKa = 8.96MEE206 pKa = 4.52KK207 pKa = 9.94FVQFQSPRR215 pKa = 11.84LLAASKK221 pKa = 10.15LALRR225 pKa = 11.84GVQINSYY232 pKa = 8.5PLNMSEE238 pKa = 4.37VSKK241 pKa = 9.27FTQLKK246 pKa = 8.17GTGDD250 pKa = 3.59EE251 pKa = 4.14NFAWEE256 pKa = 4.5HH257 pKa = 5.77FNPAGWAPIVIYY269 pKa = 10.55NPSGTTLEE277 pKa = 3.9MLITVEE283 pKa = 3.67YY284 pKa = 10.05RR285 pKa = 11.84VRR287 pKa = 11.84FDD289 pKa = 4.28LDD291 pKa = 3.4HH292 pKa = 7.03PASASHH298 pKa = 5.65SHH300 pKa = 6.47HH301 pKa = 6.59PVASDD306 pKa = 3.64SAWDD310 pKa = 3.61RR311 pKa = 11.84LVRR314 pKa = 11.84QASSLGNGVMDD325 pKa = 4.13IADD328 pKa = 3.63VVANAGMSVGRR339 pKa = 11.84AIAVANRR346 pKa = 11.84VNNVLRR352 pKa = 11.84PLPLAAAAAA361 pKa = 4.12

Molecular weight: 38.51 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1505

361

1144

752.5

82.47

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.1 ± 2.014

1.462 ± 0.315

4.784 ± 0.868

6.445 ± 1.976

3.854 ± 0.265

8.97 ± 0.468

3.522 ± 0.099

4.385 ± 0.115

4.518 ± 0.736

8.04 ± 0.557

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.392 ± 0.189

3.256 ± 1.142

6.179 ± 0.043

3.522 ± 0.099

5.847 ± 0.677

7.243 ± 0.672

4.585 ± 1.032

6.246 ± 0.478

1.595 ± 0.034

3.056 ± 0.697
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski