Streptococcus satellite phage Javan614

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 17 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZSJ8|A0A4D5ZSJ8_9VIRU DNA primase OS=Streptococcus satellite phage Javan614 OX=2558784 GN=JavanS614_0009 PE=4 SV=1
MM1 pKa = 7.16STTEE5 pKa = 3.86KK6 pKa = 10.58LRR8 pKa = 11.84EE9 pKa = 3.69FGINRR14 pKa = 11.84ICLSPYY20 pKa = 9.29KK21 pKa = 10.0KK22 pKa = 10.36YY23 pKa = 10.8SRR25 pKa = 11.84GYY27 pKa = 9.78SEE29 pKa = 5.23PGNIGTGYY37 pKa = 10.11VAGLKK42 pKa = 9.94VDD44 pKa = 3.2AGVRR48 pKa = 11.84DD49 pKa = 3.82KK50 pKa = 11.39TDD52 pKa = 3.19DD53 pKa = 3.57TVLDD57 pKa = 4.96GIVSYY62 pKa = 11.25DD63 pKa = 3.13RR64 pKa = 11.84AEE66 pKa = 4.21AKK68 pKa = 9.73NAYY71 pKa = 8.97IGQINMEE78 pKa = 4.36TASSFTGLQGVTLGYY93 pKa = 10.74DD94 pKa = 3.23ILRR97 pKa = 11.84NPAVDD102 pKa = 3.43EE103 pKa = 4.25EE104 pKa = 4.71KK105 pKa = 10.72PLFVEE110 pKa = 4.5PQWDD114 pKa = 4.03GSEE117 pKa = 4.14LPIYY121 pKa = 9.44DD122 pKa = 4.78AKK124 pKa = 10.64PLQDD128 pKa = 3.72ALVEE132 pKa = 4.21YY133 pKa = 10.42FGTEE137 pKa = 3.1SDD139 pKa = 3.35RR140 pKa = 11.84RR141 pKa = 11.84HH142 pKa = 5.76NLVPGAMVVCANKK155 pKa = 10.39GVTAYY160 pKa = 10.28RR161 pKa = 11.84PQEE164 pKa = 4.14DD165 pKa = 4.2RR166 pKa = 11.84PFQAGEE172 pKa = 4.49GYY174 pKa = 10.43GVWSAIAISFAADD187 pKa = 3.29GTVNSDD193 pKa = 3.62MFIEE197 pKa = 5.0DD198 pKa = 3.05AGVWTKK204 pKa = 11.27NDD206 pKa = 3.28NEE208 pKa = 4.26ADD210 pKa = 4.37LIAWLDD216 pKa = 3.63TRR218 pKa = 11.84RR219 pKa = 11.84KK220 pKa = 10.15AIAKK224 pKa = 9.97SIAEE228 pKa = 4.54CGQDD232 pKa = 3.07SHH234 pKa = 7.59VRR236 pKa = 11.84FARR239 pKa = 11.84TYY241 pKa = 9.98IGFAHH246 pKa = 7.27AMMKK250 pKa = 10.16PNQIGNAITVGPYY263 pKa = 9.57FAIPVDD269 pKa = 5.17AIPGGDD275 pKa = 2.97ITDD278 pKa = 4.12PDD280 pKa = 3.99GCFDD284 pKa = 3.72ILEE287 pKa = 4.6HH288 pKa = 7.1LSLPDD293 pKa = 3.1WLDD296 pKa = 3.05AMNYY300 pKa = 8.61TSLTANDD307 pKa = 3.71QIKK310 pKa = 9.97YY311 pKa = 10.21

Molecular weight: 34.14 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZT10|A0A4D5ZT10_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan614 OX=2558784 GN=JavanS614_0011 PE=4 SV=1
MM1 pKa = 7.78KK2 pKa = 10.26INEE5 pKa = 4.22IKK7 pKa = 10.67KK8 pKa = 9.76KK9 pKa = 10.54DD10 pKa = 3.3GSTVYY15 pKa = 10.36RR16 pKa = 11.84ANIYY20 pKa = 10.62LGVDD24 pKa = 3.95VITGKK29 pKa = 10.74KK30 pKa = 7.55VTTKK34 pKa = 9.32VTARR38 pKa = 11.84TKK40 pKa = 10.91KK41 pKa = 9.48EE42 pKa = 4.24LKK44 pKa = 9.67TKK46 pKa = 10.1AQQAQFDD53 pKa = 4.54FKK55 pKa = 11.59ANGSTRR61 pKa = 11.84YY62 pKa = 9.72KK63 pKa = 9.99EE64 pKa = 4.21VAIEE68 pKa = 4.25TYY70 pKa = 10.63EE71 pKa = 3.95EE72 pKa = 4.45LAISWWDD79 pKa = 3.38SYY81 pKa = 11.84KK82 pKa = 10.19NTVKK86 pKa = 10.93ANTRR90 pKa = 11.84NTQKK94 pKa = 11.26GLLNNHH100 pKa = 5.72VLPLFGEE107 pKa = 4.67FKK109 pKa = 10.56LDD111 pKa = 3.59KK112 pKa = 10.06LTTPLIQSTMNKK124 pKa = 9.46LANSTNTGEE133 pKa = 3.98ASAYY137 pKa = 8.99LHH139 pKa = 6.25YY140 pKa = 11.02GKK142 pKa = 9.53IHH144 pKa = 5.96TLNKK148 pKa = 10.19RR149 pKa = 11.84ILQYY153 pKa = 11.17GVILQVIPTNPANNVVLPRR172 pKa = 11.84NTQKK176 pKa = 11.11DD177 pKa = 3.42KK178 pKa = 10.95KK179 pKa = 10.82DD180 pKa = 3.45KK181 pKa = 10.98VKK183 pKa = 10.8HH184 pKa = 5.54FNNDD188 pKa = 2.8EE189 pKa = 4.08LKK191 pKa = 10.82QFLTYY196 pKa = 10.53LDD198 pKa = 4.07SLDD201 pKa = 3.36NSKK204 pKa = 11.22YY205 pKa = 8.53KK206 pKa = 10.13TYY208 pKa = 11.4YY209 pKa = 10.78DD210 pKa = 2.93ITLYY214 pKa = 10.96KK215 pKa = 10.3FLLATGCRR223 pKa = 11.84INEE226 pKa = 4.0ALALSWSDD234 pKa = 2.86IDD236 pKa = 4.49LDD238 pKa = 3.79NSVVHH243 pKa = 5.55ITKK246 pKa = 9.12TLNCDD251 pKa = 3.19MKK253 pKa = 11.32LNSPKK258 pKa = 10.63SKK260 pKa = 10.55AGYY263 pKa = 9.68RR264 pKa = 11.84DD265 pKa = 3.11IDD267 pKa = 3.33IDD269 pKa = 3.84QQTVTMLKK277 pKa = 10.09KK278 pKa = 9.84YY279 pKa = 8.29QRR281 pKa = 11.84KK282 pKa = 6.06QTQEE286 pKa = 3.04AWKK289 pKa = 10.12LGRR292 pKa = 11.84TEE294 pKa = 4.07TVVFSDD300 pKa = 5.91FINAYY305 pKa = 9.33PNYY308 pKa = 9.28KK309 pKa = 10.23ALAGRR314 pKa = 11.84LRR316 pKa = 11.84SYY318 pKa = 10.28FKK320 pKa = 10.67RR321 pKa = 11.84AGVNNIGFHH330 pKa = 5.79GFRR333 pKa = 11.84HH334 pKa = 4.87THH336 pKa = 6.58ASLLLNSGIPYY347 pKa = 10.0KK348 pKa = 10.34EE349 pKa = 3.8LQHH352 pKa = 6.73RR353 pKa = 11.84LGHH356 pKa = 5.68STLSMTMDD364 pKa = 4.17TYY366 pKa = 11.8SHH368 pKa = 7.15LSKK371 pKa = 11.01EE372 pKa = 4.3NAKK375 pKa = 10.31KK376 pKa = 9.35ATSFYY381 pKa = 10.1EE382 pKa = 3.9QALKK386 pKa = 10.8SII388 pKa = 4.54

Molecular weight: 44.41 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

17

0

17

3220

61

502

189.4

21.39

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.894 ± 0.659

0.559 ± 0.122

5.776 ± 0.658

6.211 ± 0.834

4.255 ± 0.419

6.242 ± 0.51

1.522 ± 0.279

6.863 ± 0.469

8.323 ± 0.858

9.41 ± 0.708

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.516 ± 0.364

5.621 ± 0.572

3.975 ± 0.5

3.82 ± 0.537

3.602 ± 0.367

5.963 ± 0.518

6.739 ± 0.616

5.901 ± 0.338

1.242 ± 0.195

4.565 ± 0.322
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski