Moniliophthora roreri (strain MCA 2997) (Cocoa frosty pod rot fungus) (Crinipellis roreri)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Marasmiaceae; Moniliophthora; Moniliophthora roreri

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 17976 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|V2X2R2|V2X2R2_MONRO Nwd2 OS=Moniliophthora roreri (strain MCA 2997) OX=1381753 GN=Moror_15220 PE=4 SV=1
MM1 pKa = 6.98NHH3 pKa = 6.72HH4 pKa = 7.28LEE6 pKa = 4.29TMSPYY11 pKa = 10.47SPCEE15 pKa = 3.36EE16 pKa = 5.37DD17 pKa = 4.29EE18 pKa = 4.08IQEE21 pKa = 4.16ILSQFYY27 pKa = 9.13LTDD30 pKa = 3.37ATEE33 pKa = 4.81SEE35 pKa = 4.42DD36 pKa = 4.89TDD38 pKa = 4.82LCDD41 pKa = 5.91LDD43 pKa = 4.82IEE45 pKa = 4.62SSLYY49 pKa = 10.58RR50 pKa = 11.84SDD52 pKa = 4.56EE53 pKa = 4.04EE54 pKa = 4.4EE55 pKa = 4.27EE56 pKa = 4.49DD57 pKa = 3.74VEE59 pKa = 5.39LYY61 pKa = 10.49EE62 pKa = 6.14LYY64 pKa = 11.06GDD66 pKa = 5.87DD67 pKa = 6.37DD68 pKa = 6.78DD69 pKa = 7.76DD70 pKa = 7.78DD71 pKa = 7.48DD72 pKa = 7.59DD73 pKa = 7.63DD74 pKa = 6.84DD75 pKa = 6.9DD76 pKa = 5.21NDD78 pKa = 3.71HH79 pKa = 7.3DD80 pKa = 4.83RR81 pKa = 11.84YY82 pKa = 10.69SYY84 pKa = 11.11SSRR87 pKa = 11.84EE88 pKa = 3.93SDD90 pKa = 4.63EE91 pKa = 5.15SDD93 pKa = 3.74LDD95 pKa = 3.98YY96 pKa = 11.26PPDD99 pKa = 4.65PPTEE103 pKa = 4.06NYY105 pKa = 10.32LPSFQDD111 pKa = 3.05SCQDD115 pKa = 3.06GEE117 pKa = 4.57LRR119 pKa = 11.84SDD121 pKa = 4.81PIDD124 pKa = 3.78SFHH127 pKa = 7.7DD128 pKa = 3.25ATYY131 pKa = 10.68RR132 pKa = 11.84NSKK135 pKa = 9.5MSDD138 pKa = 2.83VSLTIDD144 pKa = 3.26GLGSRR149 pKa = 11.84EE150 pKa = 3.89EE151 pKa = 4.15PSRR154 pKa = 11.84GRR156 pKa = 11.84PLQKK160 pKa = 10.99KK161 pKa = 8.78MIGWWASASPGHH173 pKa = 6.23EE174 pKa = 4.46LYY176 pKa = 10.64QQVASRR182 pKa = 11.84HH183 pKa = 5.52DD184 pKa = 3.83SEE186 pKa = 4.73SS187 pKa = 3.11

Molecular weight: 21.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|V2YDX6|V2YDX6_MONRO Uncharacterized protein (Fragment) OS=Moniliophthora roreri (strain MCA 2997) OX=1381753 GN=Moror_792 PE=4 SV=1
QQ1 pKa = 6.53GQNNGQQNNGQQGAQPGAAPAGANNGANGGTAGQQGAQQGQQGAQPGAAPAQQGQNRR58 pKa = 11.84GGNRR62 pKa = 11.84GGRR65 pKa = 11.84GRR67 pKa = 11.84GRR69 pKa = 11.84QQRR72 pKa = 11.84SLLSRR77 pKa = 11.84MSLL80 pKa = 3.35

Molecular weight: 7.85 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

17972

4

17976

7359806

23

5026

409.4

45.52

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.637 ± 0.015

1.267 ± 0.008

5.541 ± 0.013

6.033 ± 0.017

3.948 ± 0.013

6.326 ± 0.019

2.507 ± 0.008

5.278 ± 0.016

4.882 ± 0.017

9.302 ± 0.02

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.147 ± 0.008

3.799 ± 0.011

6.277 ± 0.022

3.801 ± 0.011

5.828 ± 0.015

8.753 ± 0.03

6.114 ± 0.012

6.221 ± 0.014

1.515 ± 0.007

2.824 ± 0.01
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski