Bhendi yellow vein mosaic betasatellite [India:Coimbator:OYCO1:2005]

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite; Bhendi yellow vein mosaic betasatellite

Average proteome isoelectric point is 5.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E7BNB9|E7BNB9_9VIRU C1 protein OS=Bhendi yellow vein mosaic betasatellite [India:Coimbator:OYCO1:2005] OX=908072 GN=C1 PE=4 SV=1
MM1 pKa = 7.23TRR3 pKa = 11.84FSRR6 pKa = 11.84TRR8 pKa = 11.84EE9 pKa = 4.11GIVIRR14 pKa = 11.84EE15 pKa = 4.25DD16 pKa = 3.41VRR18 pKa = 11.84DD19 pKa = 3.77KK20 pKa = 10.33QQQRR24 pKa = 11.84ASVHH28 pKa = 6.12KK29 pKa = 9.87YY30 pKa = 9.09ISSAKK35 pKa = 8.18WSSHH39 pKa = 3.5ITKK42 pKa = 10.59AFIVDD47 pKa = 3.13YY48 pKa = 10.38AYY50 pKa = 10.64QQLHH54 pKa = 6.35IPFDD58 pKa = 3.77FTGVEE63 pKa = 4.25GEE65 pKa = 4.01ITSTFKK71 pKa = 10.2FHH73 pKa = 6.13YY74 pKa = 8.58WGSKK78 pKa = 9.77AEE80 pKa = 4.51EE81 pKa = 4.2ILEE84 pKa = 3.84EE85 pKa = 4.9DD86 pKa = 3.96IIHH89 pKa = 5.76VVDD92 pKa = 5.04IIIMEE97 pKa = 4.49NPDD100 pKa = 3.32IMVMEE105 pKa = 4.29VNEE108 pKa = 3.92PVIIDD113 pKa = 3.61SNIIII118 pKa = 4.5

Molecular weight: 13.8 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E7BNB9|E7BNB9_9VIRU C1 protein OS=Bhendi yellow vein mosaic betasatellite [India:Coimbator:OYCO1:2005] OX=908072 GN=C1 PE=4 SV=1
MM1 pKa = 7.23TRR3 pKa = 11.84FSRR6 pKa = 11.84TRR8 pKa = 11.84EE9 pKa = 4.11GIVIRR14 pKa = 11.84EE15 pKa = 4.25DD16 pKa = 3.41VRR18 pKa = 11.84DD19 pKa = 3.77KK20 pKa = 10.33QQQRR24 pKa = 11.84ASVHH28 pKa = 6.12KK29 pKa = 9.87YY30 pKa = 9.09ISSAKK35 pKa = 8.18WSSHH39 pKa = 3.5ITKK42 pKa = 10.59AFIVDD47 pKa = 3.13YY48 pKa = 10.38AYY50 pKa = 10.64QQLHH54 pKa = 6.35IPFDD58 pKa = 3.77FTGVEE63 pKa = 4.25GEE65 pKa = 4.01ITSTFKK71 pKa = 10.2FHH73 pKa = 6.13YY74 pKa = 8.58WGSKK78 pKa = 9.77AEE80 pKa = 4.51EE81 pKa = 4.2ILEE84 pKa = 3.84EE85 pKa = 4.9DD86 pKa = 3.96IIHH89 pKa = 5.76VVDD92 pKa = 5.04IIIMEE97 pKa = 4.49NPDD100 pKa = 3.32IMVMEE105 pKa = 4.29VNEE108 pKa = 3.92PVIIDD113 pKa = 3.61SNIIII118 pKa = 4.5

Molecular weight: 13.8 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

118

118

118

118.0

13.8

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.237 ± 0.0

0.0 ± 0.0

6.78 ± 0.0

9.322 ± 0.0

5.085 ± 0.0

3.39 ± 0.0

4.237 ± 0.0

16.102 ± 0.0

5.085 ± 0.0

1.695 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.39 ± 0.0

2.542 ± 0.0

2.542 ± 0.0

4.237 ± 0.0

5.085 ± 0.0

7.627 ± 0.0

5.085 ± 0.0

8.475 ± 0.0

1.695 ± 0.0

3.39 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski