Celerinatantimonas diazotrophica

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Gammaproteobacteria incertae sedis; Celerinatantimonadaceae; Celerinatantimonas

Average proteome isoelectric point is 6.63

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3525 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4R1JLF1|A0A4R1JLF1_9GAMM Transcriptional regulator OS=Celerinatantimonas diazotrophica OX=412034 GN=EV690_1967 PE=3 SV=1
MM1 pKa = 7.58ASVGLFFGSDD11 pKa = 3.17TGNTEE16 pKa = 4.11AVAQMIQIEE25 pKa = 4.39LGKK28 pKa = 10.58NMVDD32 pKa = 3.29IYY34 pKa = 11.19DD35 pKa = 3.58IAKK38 pKa = 8.31STKK41 pKa = 9.84EE42 pKa = 4.38DD43 pKa = 3.21IEE45 pKa = 4.39QYY47 pKa = 11.08SLILIGIPTWYY58 pKa = 10.15YY59 pKa = 11.42GEE61 pKa = 4.62SQCDD65 pKa = 2.96WDD67 pKa = 4.55DD68 pKa = 4.44FYY70 pKa = 11.36PEE72 pKa = 4.55LEE74 pKa = 5.2KK75 pKa = 10.21IDD77 pKa = 3.9FTDD80 pKa = 4.1KK81 pKa = 10.29IVAIFGCGDD90 pKa = 3.25QEE92 pKa = 5.17DD93 pKa = 4.22YY94 pKa = 11.77AEE96 pKa = 4.35YY97 pKa = 10.43FLDD100 pKa = 4.07AMGTVRR106 pKa = 11.84DD107 pKa = 3.91IIEE110 pKa = 4.22ARR112 pKa = 11.84GATIVGQWSTQGYY125 pKa = 8.4EE126 pKa = 4.29FEE128 pKa = 4.23ASKK131 pKa = 11.36ALVDD135 pKa = 4.19DD136 pKa = 3.67NHH138 pKa = 7.12FIGLGIDD145 pKa = 3.68EE146 pKa = 4.98DD147 pKa = 4.09RR148 pKa = 11.84QPEE151 pKa = 4.27LTEE154 pKa = 3.64QRR156 pKa = 11.84VKK158 pKa = 10.25QWCKK162 pKa = 9.95QIYY165 pKa = 10.43DD166 pKa = 4.02EE167 pKa = 4.49MCLAEE172 pKa = 5.07LADD175 pKa = 3.75

Molecular weight: 19.89 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4R1JAE7|A0A4R1JAE7_9GAMM ATP-dependent DNA helicase DinG OS=Celerinatantimonas diazotrophica OX=412034 GN=EV690_2650 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVLKK11 pKa = 10.6RR12 pKa = 11.84SRR14 pKa = 11.84THH16 pKa = 6.4GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.32KK26 pKa = 10.31GRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.39GRR39 pKa = 11.84ARR41 pKa = 11.84LSAA44 pKa = 3.91

Molecular weight: 5.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3525

0

3525

1124885

30

2866

319.1

35.57

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.702 ± 0.045

1.182 ± 0.015

5.07 ± 0.032

5.421 ± 0.046

4.034 ± 0.031

6.672 ± 0.044

2.641 ± 0.022

6.675 ± 0.039

4.924 ± 0.036

10.829 ± 0.052

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.596 ± 0.021

4.085 ± 0.033

4.091 ± 0.026

5.537 ± 0.049

4.824 ± 0.034

6.622 ± 0.035

4.966 ± 0.036

6.639 ± 0.036

1.33 ± 0.017

3.16 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski