Deinococcus aerius

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus

Average proteome isoelectric point is 6.85

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4445 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2I9CYD8|A0A2I9CYD8_9DEIO Cytochrome P450 cyp OS=Deinococcus aerius OX=200253 GN=DAERI_120156 PE=3 SV=1
MM1 pKa = 6.5QTPSEE6 pKa = 4.12LKK8 pKa = 10.12YY9 pKa = 11.03APTHH13 pKa = 5.3EE14 pKa = 4.2WLAEE18 pKa = 4.43DD19 pKa = 3.99GTVGISDD26 pKa = 4.46FAQDD30 pKa = 3.29QLGDD34 pKa = 3.68VVYY37 pKa = 11.21VEE39 pKa = 4.52LPEE42 pKa = 4.03VGRR45 pKa = 11.84VVTAGEE51 pKa = 4.09TVAVVEE57 pKa = 4.56SVKK60 pKa = 10.0TASDD64 pKa = 3.45IYY66 pKa = 11.02APASGTITAVNEE78 pKa = 4.06QLSGSPEE85 pKa = 4.05LVNSGPYY92 pKa = 9.66GDD94 pKa = 4.02GWLFRR99 pKa = 11.84LDD101 pKa = 3.5VTEE104 pKa = 4.23EE105 pKa = 4.03SGDD108 pKa = 3.76LMDD111 pKa = 5.43AEE113 pKa = 5.41AYY115 pKa = 10.09SAANSS120 pKa = 3.56

Molecular weight: 12.66 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2I9CZ82|A0A2I9CZ82_9DEIO NUDIX hydrolase OS=Deinococcus aerius OX=200253 GN=DAERI_150041 PE=3 SV=1
MM1 pKa = 7.29TVPLPAALVASLNDD15 pKa = 3.56SRR17 pKa = 11.84PCQPEE22 pKa = 3.93RR23 pKa = 11.84GCGLRR28 pKa = 11.84AFDD31 pKa = 4.27AVHH34 pKa = 6.45FAAAQAVSPLGVQLMTFDD52 pKa = 3.82LKK54 pKa = 11.05LRR56 pKa = 11.84AVAEE60 pKa = 4.02QAMPGQVWQSEE71 pKa = 3.99RR72 pKa = 11.84RR73 pKa = 11.84ILFLCPLRR81 pKa = 11.84LPFRR85 pKa = 11.84APCVAGWQPEE95 pKa = 4.42TPRR98 pKa = 11.84LAGPGSAQPNFTRR111 pKa = 11.84DD112 pKa = 2.61AWGEE116 pKa = 3.79FIKK119 pKa = 10.59QKK121 pKa = 9.1RR122 pKa = 11.84HH123 pKa = 3.75SRR125 pKa = 11.84AVLRR129 pKa = 11.84HH130 pKa = 3.66QRR132 pKa = 11.84GRR134 pKa = 11.84YY135 pKa = 6.74IRR137 pKa = 11.84RR138 pKa = 11.84RR139 pKa = 11.84LRR141 pKa = 11.84YY142 pKa = 9.04AYY144 pKa = 10.17AGEE147 pKa = 4.09WRR149 pKa = 11.84PKK151 pKa = 9.68PVWAWWYY158 pKa = 9.45RR159 pKa = 11.84VPGQASKK166 pKa = 11.53NNTVCSCGLCRR177 pKa = 11.84AEE179 pKa = 5.1KK180 pKa = 10.78YY181 pKa = 9.79RR182 pKa = 11.84DD183 pKa = 3.41KK184 pKa = 10.95PRR186 pKa = 11.84QRR188 pKa = 11.84WWDD191 pKa = 3.57EE192 pKa = 3.69EE193 pKa = 4.18

Molecular weight: 22.23 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4445

0

4445

1341196

25

3545

301.7

32.6

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.326 ± 0.057

0.578 ± 0.01

4.981 ± 0.029

5.836 ± 0.039

3.161 ± 0.022

9.633 ± 0.038

2.16 ± 0.022

3.138 ± 0.028

2.123 ± 0.031

11.831 ± 0.058

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.719 ± 0.016

2.359 ± 0.028

6.179 ± 0.032

3.316 ± 0.025

8.175 ± 0.042

4.604 ± 0.025

5.968 ± 0.034

8.091 ± 0.036

1.452 ± 0.017

2.368 ± 0.02
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski