Halorubrum pleomorphic virus 10

Taxonomy: Viruses; Monodnaviria; Trapavirae; Saleviricota; Huolimaviricetes; Haloruvirales; Pleolipoviridae; Betapleolipovirus; Betapleolipovirus HRPV10

Average proteome isoelectric point is 5.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 13 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A410N6N8|A0A410N6N8_9VIRU ORF9 OS=Halorubrum pleomorphic virus 10 OX=2507576 GN=HRPV10-gp11 PE=4 SV=1
MM1 pKa = 7.78AKK3 pKa = 8.66MQMDD7 pKa = 5.64AIDD10 pKa = 3.91ASLFVLNTMAGFLLVGIGTFEE31 pKa = 4.34LFGVDD36 pKa = 4.79FGATLFSPAGIGLSTAWVIGYY57 pKa = 9.33AAVVGTLVTNDD68 pKa = 3.22NAEE71 pKa = 4.14LSSLTNDD78 pKa = 3.35VQDD81 pKa = 4.16LEE83 pKa = 4.52GYY85 pKa = 10.03YY86 pKa = 10.21YY87 pKa = 11.12AAALGTLLLPVAFVVFPDD105 pKa = 3.87TVGSFFKK112 pKa = 11.03SADD115 pKa = 3.44LWGLAYY121 pKa = 10.33VVLVTSGQAALGWMLL136 pKa = 4.07

Molecular weight: 14.26 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A410N6Y6|A0A410N6Y6_9VIRU ORF5 OS=Halorubrum pleomorphic virus 10 OX=2507576 GN=HRPV10-gp05 PE=4 SV=1
MM1 pKa = 7.75AKK3 pKa = 8.31QTARR7 pKa = 11.84DD8 pKa = 3.92RR9 pKa = 11.84CWNRR13 pKa = 11.84ALDD16 pKa = 3.66IVLKK20 pKa = 10.65KK21 pKa = 10.79GGVVRR26 pKa = 11.84KK27 pKa = 9.47QDD29 pKa = 4.13LILAEE34 pKa = 4.3EE35 pKa = 4.35VSEE38 pKa = 4.2RR39 pKa = 11.84TAADD43 pKa = 3.5VLSTMTDD50 pKa = 3.22MGWLKK55 pKa = 10.57RR56 pKa = 11.84EE57 pKa = 4.05YY58 pKa = 11.02VPGPKK63 pKa = 9.43ADD65 pKa = 2.77NWRR68 pKa = 11.84RR69 pKa = 11.84GDD71 pKa = 3.87EE72 pKa = 4.19LPATLSTEE80 pKa = 4.13GAKK83 pKa = 10.33

Molecular weight: 9.32 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

13

0

13

2711

46

538

208.5

22.73

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.918 ± 1.067

0.59 ± 0.289

7.709 ± 0.641

7.894 ± 0.873

2.619 ± 0.388

8.521 ± 0.806

1.66 ± 0.606

4.869 ± 0.397

3.467 ± 0.418

7.488 ± 0.732

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.176 ± 0.243

3.652 ± 0.332

3.726 ± 0.32

2.656 ± 0.256

5.681 ± 0.751

6.898 ± 0.404

6.824 ± 0.613

7.451 ± 0.947

1.475 ± 0.241

3.726 ± 0.327
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski