Amino acid dipepetide frequency for Tellina virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
15.944AlaAla: 15.944 ± 0.828
0.997AlaCys: 0.997 ± 0.592
3.986AlaAsp: 3.986 ± 0.291
6.477AlaGlu: 6.477 ± 0.141
0.997AlaPhe: 0.997 ± 0.592
7.972AlaGly: 7.972 ± 3.404
0.498AlaHis: 0.498 ± 0.296
3.488AlaIle: 3.488 ± 0.742
6.477AlaLys: 6.477 ± 2.799
8.47AlaLeu: 8.47 ± 0.287
3.986AlaMet: 3.986 ± 0.291
2.99AlaAsn: 2.99 ± 1.11
7.972AlaPro: 7.972 ± 0.082
4.983AlaGln: 4.983 ± 1.629
6.976AlaArg: 6.976 ± 0.819
7.972AlaSer: 7.972 ± 0.082
6.477AlaThr: 6.477 ± 0.141
5.979AlaVal: 5.979 ± 1.556
1.495AlaTrp: 1.495 ± 0.442
1.495AlaTyr: 1.495 ± 1.106
0.0AlaXaa: 0.0 ± 0.0
Cys
1.495CysAla: 1.495 ± 0.223
0.498CysCys: 0.498 ± 0.296
0.0CysAsp: 0.0 ± 0.0
0.0CysGlu: 0.0 ± 0.0
0.0CysPhe: 0.0 ± 0.0
0.0CysGly: 0.0 ± 0.0
0.0CysHis: 0.0 ± 0.0
0.997CysIle: 0.997 ± 0.073
0.0CysLys: 0.0 ± 0.0
0.498CysLeu: 0.498 ± 0.296
0.498CysMet: 0.498 ± 0.369
0.997CysAsn: 0.997 ± 0.073
0.498CysPro: 0.498 ± 0.296
0.0CysGln: 0.0 ± 0.0
0.997CysArg: 0.997 ± 0.073
0.498CysSer: 0.498 ± 0.296
0.0CysThr: 0.0 ± 0.0
0.498CysVal: 0.498 ± 0.369
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.986AspAla: 3.986 ± 1.702
0.0AspCys: 0.0 ± 0.0
1.993AspAsp: 1.993 ± 0.146
2.99AspGlu: 2.99 ± 0.219
2.99AspPhe: 2.99 ± 0.219
2.99AspGly: 2.99 ± 0.219
0.997AspHis: 0.997 ± 0.073
2.99AspIle: 2.99 ± 0.219
4.484AspLys: 4.484 ± 0.66
6.477AspLeu: 6.477 ± 0.806
1.495AspMet: 1.495 ± 0.317
2.99AspAsn: 2.99 ± 0.446
3.986AspPro: 3.986 ± 1.62
0.997AspGln: 0.997 ± 0.073
3.488AspArg: 3.488 ± 0.077
2.491AspSer: 2.491 ± 0.815
1.993AspThr: 1.993 ± 0.81
2.99AspVal: 2.99 ± 0.446
0.498AspTrp: 0.498 ± 0.296
0.997AspTyr: 0.997 ± 0.592
0.0AspXaa: 0.0 ± 0.0
Glu
7.474GluAla: 7.474 ± 1.115
0.498GluCys: 0.498 ± 0.369
1.993GluAsp: 1.993 ± 1.475
4.484GluGlu: 4.484 ± 0.66
1.495GluPhe: 1.495 ± 0.442
2.491GluGly: 2.491 ± 1.179
0.997GluHis: 0.997 ± 0.592
1.495GluIle: 1.495 ± 0.442
3.488GluLys: 3.488 ± 1.252
4.983GluLeu: 4.983 ± 0.364
1.495GluMet: 1.495 ± 0.223
1.495GluAsn: 1.495 ± 0.442
1.495GluPro: 1.495 ± 1.106
2.99GluGln: 2.99 ± 0.446
4.484GluArg: 4.484 ± 1.325
6.976GluSer: 6.976 ± 1.839
4.484GluThr: 4.484 ± 1.333
4.983GluVal: 4.983 ± 1.029
0.997GluTrp: 0.997 ± 0.592
0.498GluTyr: 0.498 ± 0.296
0.0GluXaa: 0.0 ± 0.0
Phe
0.997PheAla: 0.997 ± 0.073
0.0PheCys: 0.0 ± 0.0
2.491PheAsp: 2.491 ± 0.514
1.495PheGlu: 1.495 ± 0.223
0.997PhePhe: 0.997 ± 0.737
1.495PheGly: 1.495 ± 0.442
0.997PheHis: 0.997 ± 0.737
1.495PheIle: 1.495 ± 0.442
0.498PheLys: 0.498 ± 0.369
2.491PheLeu: 2.491 ± 0.514
1.495PheMet: 1.495 ± 0.887
4.484PheAsn: 4.484 ± 1.325
2.99PhePro: 2.99 ± 1.547
0.498PheGln: 0.498 ± 0.369
0.0PheArg: 0.0 ± 0.0
2.99PheSer: 2.99 ± 0.446
1.993PheThr: 1.993 ± 0.146
0.997PheVal: 0.997 ± 0.073
0.0PheTrp: 0.0 ± 0.0
0.498PheTyr: 0.498 ± 0.369
0.0PheXaa: 0.0 ± 0.0
Gly
6.477GlyAla: 6.477 ± 0.141
0.997GlyCys: 0.997 ± 0.073
3.488GlyAsp: 3.488 ± 0.742
5.481GlyGlu: 5.481 ± 1.397
0.0GlyPhe: 0.0 ± 0.0
3.986GlyGly: 3.986 ± 0.956
0.997GlyHis: 0.997 ± 0.592
2.99GlyIle: 2.99 ± 0.219
3.986GlyLys: 3.986 ± 1.038
5.979GlyLeu: 5.979 ± 0.227
1.993GlyMet: 1.993 ± 0.519
3.986GlyAsn: 3.986 ± 0.373
3.488GlyPro: 3.488 ± 0.742
0.997GlyGln: 0.997 ± 0.073
2.491GlyArg: 2.491 ± 0.815
3.488GlySer: 3.488 ± 1.252
5.979GlyThr: 5.979 ± 1.556
4.484GlyVal: 4.484 ± 1.998
1.495GlyTrp: 1.495 ± 1.106
1.993GlyTyr: 1.993 ± 0.81
0.0GlyXaa: 0.0 ± 0.0
His
0.498HisAla: 0.498 ± 0.296
0.0HisCys: 0.0 ± 0.0
0.498HisAsp: 0.498 ± 0.369
0.498HisGlu: 0.498 ± 0.369
1.993HisPhe: 1.993 ± 1.475
1.495HisGly: 1.495 ± 0.442
0.498HisHis: 0.498 ± 0.369
1.495HisIle: 1.495 ± 0.223
0.0HisLys: 0.0 ± 0.0
2.99HisLeu: 2.99 ± 1.547
0.997HisMet: 0.997 ± 0.737
1.495HisAsn: 1.495 ± 0.223
0.498HisPro: 0.498 ± 0.296
0.498HisGln: 0.498 ± 0.369
0.997HisArg: 0.997 ± 0.073
0.498HisSer: 0.498 ± 0.296
0.498HisThr: 0.498 ± 0.369
0.997HisVal: 0.997 ± 0.073
0.0HisTrp: 0.0 ± 0.0
0.498HisTyr: 0.498 ± 0.296
0.0HisXaa: 0.0 ± 0.0
Ile
6.976IleAla: 6.976 ± 0.51
0.0IleCys: 0.0 ± 0.0
4.484IleAsp: 4.484 ± 1.325
1.993IleGlu: 1.993 ± 0.146
0.997IlePhe: 0.997 ± 0.073
1.993IleGly: 1.993 ± 0.81
0.498IleHis: 0.498 ± 0.296
2.491IleIle: 2.491 ± 0.15
4.983IleLys: 4.983 ± 1.629
2.99IleLeu: 2.99 ± 1.11
0.498IleMet: 0.498 ± 0.296
2.99IleAsn: 2.99 ± 0.219
3.986IlePro: 3.986 ± 0.956
1.495IleGln: 1.495 ± 0.223
1.495IleArg: 1.495 ± 0.887
4.983IleSer: 4.983 ± 1.629
2.491IleThr: 2.491 ± 1.479
1.495IleVal: 1.495 ± 0.223
0.997IleTrp: 0.997 ± 0.073
2.491IleTyr: 2.491 ± 0.514
0.0IleXaa: 0.0 ± 0.0
Lys
3.986LysAla: 3.986 ± 1.62
0.0LysCys: 0.0 ± 0.0
1.495LysAsp: 1.495 ± 0.442
2.99LysGlu: 2.99 ± 1.547
0.997LysPhe: 0.997 ± 0.737
2.491LysGly: 2.491 ± 0.15
0.0LysHis: 0.0 ± 0.0
2.99LysIle: 2.99 ± 0.219
2.491LysLys: 2.491 ± 0.514
3.986LysLeu: 3.986 ± 0.956
1.495LysMet: 1.495 ± 0.442
4.484LysAsn: 4.484 ± 1.333
4.983LysPro: 4.983 ± 0.965
1.495LysGln: 1.495 ± 0.223
3.488LysArg: 3.488 ± 0.742
3.986LysSer: 3.986 ± 0.956
4.484LysThr: 4.484 ± 0.004
2.99LysVal: 2.99 ± 0.219
0.498LysTrp: 0.498 ± 0.369
2.491LysTyr: 2.491 ± 0.514
0.0LysXaa: 0.0 ± 0.0
Leu
7.972LeuAla: 7.972 ± 0.082
0.997LeuCys: 0.997 ± 0.073
2.99LeuAsp: 2.99 ± 0.446
4.484LeuGlu: 4.484 ± 0.66
1.495LeuPhe: 1.495 ± 0.442
5.979LeuGly: 5.979 ± 1.766
0.498LeuHis: 0.498 ± 0.369
1.495LeuIle: 1.495 ± 0.223
3.986LeuLys: 3.986 ± 1.62
10.962LeuLeu: 10.962 ± 1.466
2.99LeuMet: 2.99 ± 1.932
4.983LeuAsn: 4.983 ± 1.029
5.481LeuPro: 5.481 ± 1.261
0.997LeuGln: 0.997 ± 0.073
8.47LeuArg: 8.47 ± 2.28
10.463LeuSer: 10.463 ± 1.561
6.477LeuThr: 6.477 ± 2.517
5.481LeuVal: 5.481 ± 0.596
0.498LeuTrp: 0.498 ± 0.296
1.495LeuTyr: 1.495 ± 0.223
0.0LeuXaa: 0.0 ± 0.0
Met
4.484MetAla: 4.484 ± 1.333
0.0MetCys: 0.0 ± 0.0
1.495MetAsp: 1.495 ± 0.887
0.997MetGlu: 0.997 ± 0.592
0.997MetPhe: 0.997 ± 0.737
1.993MetGly: 1.993 ± 0.519
0.0MetHis: 0.0 ± 0.0
0.498MetIle: 0.498 ± 0.296
0.997MetLys: 0.997 ± 0.592
2.99MetLeu: 2.99 ± 1.11
0.997MetMet: 0.997 ± 0.592
0.997MetAsn: 0.997 ± 0.592
0.498MetPro: 0.498 ± 0.369
1.495MetGln: 1.495 ± 0.223
1.495MetArg: 1.495 ± 0.442
1.495MetSer: 1.495 ± 0.442
1.993MetThr: 1.993 ± 0.519
3.488MetVal: 3.488 ± 0.587
0.0MetTrp: 0.0 ± 0.0
1.495MetTyr: 1.495 ± 0.442
0.0MetXaa: 0.0 ± 0.0
Asn
5.979AsnAla: 5.979 ± 1.766
0.0AsnCys: 0.0 ± 0.0
1.495AsnAsp: 1.495 ± 0.223
2.491AsnGlu: 2.491 ± 0.514
1.495AsnPhe: 1.495 ± 0.223
3.488AsnGly: 3.488 ± 0.742
0.997AsnHis: 0.997 ± 0.073
2.491AsnIle: 2.491 ± 0.815
0.498AsnLys: 0.498 ± 0.369
4.983AsnLeu: 4.983 ± 1.629
0.997AsnMet: 0.997 ± 0.592
2.99AsnAsn: 2.99 ± 1.11
6.477AsnPro: 6.477 ± 1.188
1.495AsnGln: 1.495 ± 0.223
1.495AsnArg: 1.495 ± 0.223
4.484AsnSer: 4.484 ± 0.669
1.993AsnThr: 1.993 ± 0.146
3.488AsnVal: 3.488 ± 0.587
0.498AsnTrp: 0.498 ± 0.296
1.495AsnTyr: 1.495 ± 0.223
0.0AsnXaa: 0.0 ± 0.0
Pro
3.488ProAla: 3.488 ± 1.406
0.498ProCys: 0.498 ± 0.296
5.979ProAsp: 5.979 ± 0.892
2.99ProGlu: 2.99 ± 0.446
5.481ProPhe: 5.481 ± 0.733
4.983ProGly: 4.983 ± 0.965
0.498ProHis: 0.498 ± 0.369
4.484ProIle: 4.484 ± 0.004
4.484ProLys: 4.484 ± 1.989
4.484ProLeu: 4.484 ± 0.66
1.495ProMet: 1.495 ± 0.223
2.491ProAsn: 2.491 ± 0.15
2.99ProPro: 2.99 ± 0.883
1.495ProGln: 1.495 ± 0.442
3.986ProArg: 3.986 ± 1.62
4.983ProSer: 4.983 ± 1.629
6.976ProThr: 6.976 ± 0.155
2.491ProVal: 2.491 ± 0.15
0.498ProTrp: 0.498 ± 0.296
0.997ProTyr: 0.997 ± 0.073
0.0ProXaa: 0.0 ± 0.0
Gln
4.484GlnAla: 4.484 ± 0.669
0.498GlnCys: 0.498 ± 0.369
0.997GlnAsp: 0.997 ± 0.592
1.495GlnGlu: 1.495 ± 1.106
1.495GlnPhe: 1.495 ± 0.442
2.491GlnGly: 2.491 ± 1.179
0.498GlnHis: 0.498 ± 0.369
1.993GlnIle: 1.993 ± 0.519
0.997GlnLys: 0.997 ± 0.073
4.983GlnLeu: 4.983 ± 1.629
0.997GlnMet: 0.997 ± 0.073
0.0GlnAsn: 0.0 ± 0.0
0.498GlnPro: 0.498 ± 0.296
1.495GlnGln: 1.495 ± 0.442
2.491GlnArg: 2.491 ± 0.15
0.997GlnSer: 0.997 ± 0.073
2.491GlnThr: 2.491 ± 0.514
1.495GlnVal: 1.495 ± 0.442
0.0GlnTrp: 0.0 ± 0.0
1.495GlnTyr: 1.495 ± 0.442
0.0GlnXaa: 0.0 ± 0.0
Arg
3.488ArgAla: 3.488 ± 1.252
0.997ArgCys: 0.997 ± 0.073
4.484ArgAsp: 4.484 ± 0.004
3.986ArgGlu: 3.986 ± 0.956
1.993ArgPhe: 1.993 ± 0.146
1.495ArgGly: 1.495 ± 0.442
1.495ArgHis: 1.495 ± 0.442
4.983ArgIle: 4.983 ± 1.029
5.979ArgLys: 5.979 ± 0.892
3.986ArgLeu: 3.986 ± 0.291
1.993ArgMet: 1.993 ± 0.519
2.99ArgAsn: 2.99 ± 0.446
3.488ArgPro: 3.488 ± 0.077
3.986ArgGln: 3.986 ± 0.956
4.484ArgArg: 4.484 ± 2.662
1.495ArgSer: 1.495 ± 0.223
4.484ArgThr: 4.484 ± 0.004
0.498ArgVal: 0.498 ± 0.369
0.997ArgTrp: 0.997 ± 0.592
1.495ArgTyr: 1.495 ± 0.442
0.0ArgXaa: 0.0 ± 0.0
Ser
8.969SerAla: 8.969 ± 0.009
0.498SerCys: 0.498 ± 0.296
3.488SerAsp: 3.488 ± 0.742
5.481SerGlu: 5.481 ± 0.596
0.498SerPhe: 0.498 ± 0.296
7.972SerGly: 7.972 ± 2.74
3.986SerHis: 3.986 ± 2.285
4.484SerIle: 4.484 ± 0.004
1.993SerLys: 1.993 ± 0.519
5.481SerLeu: 5.481 ± 0.596
2.491SerMet: 2.491 ± 0.15
2.491SerAsn: 2.491 ± 0.15
4.983SerPro: 4.983 ± 0.364
3.488SerGln: 3.488 ± 1.252
4.484SerArg: 4.484 ± 0.66
3.986SerSer: 3.986 ± 0.373
7.474SerThr: 7.474 ± 0.45
1.495SerVal: 1.495 ± 1.106
0.498SerTrp: 0.498 ± 0.296
0.498SerTyr: 0.498 ± 0.369
0.0SerXaa: 0.0 ± 0.0
Thr
9.965ThrAla: 9.965 ± 2.594
0.498ThrCys: 0.498 ± 0.369
3.986ThrAsp: 3.986 ± 0.373
2.491ThrGlu: 2.491 ± 1.179
1.993ThrPhe: 1.993 ± 0.146
5.481ThrGly: 5.481 ± 1.261
1.993ThrHis: 1.993 ± 0.146
4.484ThrIle: 4.484 ± 1.998
2.491ThrLys: 2.491 ± 0.15
4.484ThrLeu: 4.484 ± 0.004
1.993ThrMet: 1.993 ± 0.519
2.491ThrAsn: 2.491 ± 1.479
6.477ThrPro: 6.477 ± 1.852
0.997ThrGln: 0.997 ± 0.073
3.488ThrArg: 3.488 ± 0.077
5.481ThrSer: 5.481 ± 0.068
6.477ThrThr: 6.477 ± 1.188
5.979ThrVal: 5.979 ± 0.437
1.495ThrTrp: 1.495 ± 1.106
1.993ThrTyr: 1.993 ± 0.519
0.0ThrXaa: 0.0 ± 0.0
Val
5.481ValAla: 5.481 ± 1.925
0.498ValCys: 0.498 ± 0.296
3.488ValAsp: 3.488 ± 0.587
4.484ValGlu: 4.484 ± 0.66
1.993ValPhe: 1.993 ± 0.81
3.488ValGly: 3.488 ± 0.077
0.0ValHis: 0.0 ± 0.0
2.491ValIle: 2.491 ± 0.15
2.99ValLys: 2.99 ± 0.219
4.983ValLeu: 4.983 ± 0.965
0.0ValMet: 0.0 ± 0.0
2.99ValAsn: 2.99 ± 0.219
2.491ValPro: 2.491 ± 0.15
1.993ValGln: 1.993 ± 0.146
1.993ValArg: 1.993 ± 0.81
4.484ValSer: 4.484 ± 1.325
5.481ValThr: 5.481 ± 1.261
4.484ValVal: 4.484 ± 0.004
0.0ValTrp: 0.0 ± 0.0
1.495ValTyr: 1.495 ± 0.223
0.0ValXaa: 0.0 ± 0.0
Trp
1.495TrpAla: 1.495 ± 1.106
0.0TrpCys: 0.0 ± 0.0
0.498TrpAsp: 0.498 ± 0.296
2.491TrpGlu: 2.491 ± 0.15
0.0TrpPhe: 0.0 ± 0.0
0.498TrpGly: 0.498 ± 0.296
0.0TrpHis: 0.0 ± 0.0
0.498TrpIle: 0.498 ± 0.296
0.0TrpLys: 0.0 ± 0.0
0.997TrpLeu: 0.997 ± 0.073
0.0TrpMet: 0.0 ± 0.0
0.498TrpAsn: 0.498 ± 0.296
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.498TrpArg: 0.498 ± 0.296
1.495TrpSer: 1.495 ± 0.442
0.498TrpThr: 0.498 ± 0.369
0.498TrpVal: 0.498 ± 0.296
0.498TrpTrp: 0.498 ± 0.296
0.498TrpTyr: 0.498 ± 0.369
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.993TyrAla: 1.993 ± 0.519
0.0TyrCys: 0.0 ± 0.0
2.491TyrAsp: 2.491 ± 1.179
1.495TyrGlu: 1.495 ± 0.223
0.997TyrPhe: 0.997 ± 0.073
1.993TyrGly: 1.993 ± 0.146
1.495TyrHis: 1.495 ± 1.106
1.993TyrIle: 1.993 ± 0.519
0.997TyrLys: 0.997 ± 0.073
1.495TyrLeu: 1.495 ± 1.106
0.0TyrMet: 0.0 ± 0.0
0.498TyrAsn: 0.498 ± 0.296
2.491TyrPro: 2.491 ± 0.514
0.498TyrGln: 0.498 ± 0.369
1.495TyrArg: 1.495 ± 0.442
1.495TyrSer: 1.495 ± 0.442
1.993TyrThr: 1.993 ± 0.519
0.498TyrVal: 0.498 ± 0.296
0.0TyrTrp: 0.0 ± 0.0
0.997TyrTyr: 0.997 ± 0.737
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (2008 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski