Gokushovirinae GNX3R

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; Gokushovirinae; unclassified Gokushovirinae

Average proteome isoelectric point is 7.59

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0M4MQJ0|A0A0M4MQJ0_9VIRU Putative major capsid protein OS=Gokushovirinae GNX3R OX=1701405 PE=3 SV=1
MM1 pKa = 7.4HH2 pKa = 7.53RR3 pKa = 11.84NKK5 pKa = 10.55SVDD8 pKa = 3.11VHH10 pKa = 6.0QFTMIPKK17 pKa = 9.68ADD19 pKa = 3.47IPRR22 pKa = 11.84SSFDD26 pKa = 3.38CQSTHH31 pKa = 5.3KK32 pKa = 8.11TTFDD36 pKa = 3.09AGFLVPVYY44 pKa = 10.21VDD46 pKa = 3.42EE47 pKa = 4.67MLPGDD52 pKa = 4.12TFRR55 pKa = 11.84LNMTAFARR63 pKa = 11.84LATPLYY69 pKa = 9.79PIMDD73 pKa = 4.06NMHH76 pKa = 7.03LDD78 pKa = 3.37SFFFFVPNRR87 pKa = 11.84LIWNNWQKK95 pKa = 11.19FMGQQANPDD104 pKa = 3.42SSISFVVPQQVSPAGGYY121 pKa = 10.7AIGSLQDD128 pKa = 3.62YY129 pKa = 9.06MGLPTVGQVGAGNTVSHH146 pKa = 6.57CAFWPRR152 pKa = 11.84AYY154 pKa = 11.08NLIYY158 pKa = 10.8NEE160 pKa = 3.89WFRR163 pKa = 11.84DD164 pKa = 3.51EE165 pKa = 4.86NLQNSVTVDD174 pKa = 3.41LGDD177 pKa = 4.63GPDD180 pKa = 3.16TVTNYY185 pKa = 9.58TLLRR189 pKa = 11.84RR190 pKa = 11.84GKK192 pKa = 9.86RR193 pKa = 11.84KK194 pKa = 10.37DD195 pKa = 3.57YY196 pKa = 8.24FTSALPWPQKK206 pKa = 8.94GTSVTLPLGTSAPVYY221 pKa = 9.24GTGRR225 pKa = 11.84TIGVSNGSGNFGLTTNSAGGVFGYY249 pKa = 10.87AGAYY253 pKa = 9.48DD254 pKa = 3.72KK255 pKa = 11.52ALGGSNITGTILATKK270 pKa = 9.92DD271 pKa = 2.95IGVVTSGVSGLYY283 pKa = 10.39ADD285 pKa = 5.29LSVATAATINQLRR298 pKa = 11.84QSFQIQKK305 pKa = 10.32LLEE308 pKa = 4.31RR309 pKa = 11.84DD310 pKa = 3.28ARR312 pKa = 11.84GGTRR316 pKa = 11.84YY317 pKa = 8.58TEE319 pKa = 4.72IIRR322 pKa = 11.84SHH324 pKa = 6.81FGVISPDD331 pKa = 3.07ARR333 pKa = 11.84LQRR336 pKa = 11.84PEE338 pKa = 4.12YY339 pKa = 10.25IGGGSTNININPIAQTSGSNASGTTTPMGTLAAMGTALAHH379 pKa = 5.36NHH381 pKa = 5.54GFTYY385 pKa = 10.46SATEE389 pKa = 3.7HH390 pKa = 6.31GVILGLVSVRR400 pKa = 11.84ADD402 pKa = 3.2LTYY405 pKa = 10.57QQGLQRR411 pKa = 11.84MWSRR415 pKa = 11.84STRR418 pKa = 11.84YY419 pKa = 10.23DD420 pKa = 3.49FYY422 pKa = 11.49FPAFATLGEE431 pKa = 3.95QAILNKK437 pKa = 9.91EE438 pKa = 3.96IYY440 pKa = 8.76VTGSSGDD447 pKa = 3.4NDD449 pKa = 3.28VFGYY453 pKa = 7.2QEE455 pKa = 3.24RR456 pKa = 11.84WAEE459 pKa = 3.71YY460 pKa = 9.05RR461 pKa = 11.84YY462 pKa = 9.04YY463 pKa = 10.13PSRR466 pKa = 11.84ISSLFRR472 pKa = 11.84STAAGTIDD480 pKa = 3.63AWHH483 pKa = 7.2LAQKK487 pKa = 8.59FTATPTLNTTFIQDD501 pKa = 3.74TPPVSRR507 pKa = 11.84VVAVGAAANGQQFIFDD523 pKa = 4.19SFFDD527 pKa = 4.02CKK529 pKa = 10.24KK530 pKa = 10.03ARR532 pKa = 11.84PMPMYY537 pKa = 10.18SVPGLIDD544 pKa = 3.33HH545 pKa = 7.34FYY547 pKa = 8.73MLGGISLGGVTGGLLGFIGQQQTNQNNXGYY577 pKa = 9.99SSSRR581 pKa = 3.34

Molecular weight: 63.11 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0M4MQJ0|A0A0M4MQJ0_9VIRU Putative major capsid protein OS=Gokushovirinae GNX3R OX=1701405 PE=3 SV=1
MM1 pKa = 7.4HH2 pKa = 7.53RR3 pKa = 11.84NKK5 pKa = 10.55SVDD8 pKa = 3.11VHH10 pKa = 6.0QFTMIPKK17 pKa = 9.68ADD19 pKa = 3.47IPRR22 pKa = 11.84SSFDD26 pKa = 3.38CQSTHH31 pKa = 5.3KK32 pKa = 8.11TTFDD36 pKa = 3.09AGFLVPVYY44 pKa = 10.21VDD46 pKa = 3.42EE47 pKa = 4.67MLPGDD52 pKa = 4.12TFRR55 pKa = 11.84LNMTAFARR63 pKa = 11.84LATPLYY69 pKa = 9.79PIMDD73 pKa = 4.06NMHH76 pKa = 7.03LDD78 pKa = 3.37SFFFFVPNRR87 pKa = 11.84LIWNNWQKK95 pKa = 11.19FMGQQANPDD104 pKa = 3.42SSISFVVPQQVSPAGGYY121 pKa = 10.7AIGSLQDD128 pKa = 3.62YY129 pKa = 9.06MGLPTVGQVGAGNTVSHH146 pKa = 6.57CAFWPRR152 pKa = 11.84AYY154 pKa = 11.08NLIYY158 pKa = 10.8NEE160 pKa = 3.89WFRR163 pKa = 11.84DD164 pKa = 3.51EE165 pKa = 4.86NLQNSVTVDD174 pKa = 3.41LGDD177 pKa = 4.63GPDD180 pKa = 3.16TVTNYY185 pKa = 9.58TLLRR189 pKa = 11.84RR190 pKa = 11.84GKK192 pKa = 9.86RR193 pKa = 11.84KK194 pKa = 10.37DD195 pKa = 3.57YY196 pKa = 8.24FTSALPWPQKK206 pKa = 8.94GTSVTLPLGTSAPVYY221 pKa = 9.24GTGRR225 pKa = 11.84TIGVSNGSGNFGLTTNSAGGVFGYY249 pKa = 10.87AGAYY253 pKa = 9.48DD254 pKa = 3.72KK255 pKa = 11.52ALGGSNITGTILATKK270 pKa = 9.92DD271 pKa = 2.95IGVVTSGVSGLYY283 pKa = 10.39ADD285 pKa = 5.29LSVATAATINQLRR298 pKa = 11.84QSFQIQKK305 pKa = 10.32LLEE308 pKa = 4.31RR309 pKa = 11.84DD310 pKa = 3.28ARR312 pKa = 11.84GGTRR316 pKa = 11.84YY317 pKa = 8.58TEE319 pKa = 4.72IIRR322 pKa = 11.84SHH324 pKa = 6.81FGVISPDD331 pKa = 3.07ARR333 pKa = 11.84LQRR336 pKa = 11.84PEE338 pKa = 4.12YY339 pKa = 10.25IGGGSTNININPIAQTSGSNASGTTTPMGTLAAMGTALAHH379 pKa = 5.36NHH381 pKa = 5.54GFTYY385 pKa = 10.46SATEE389 pKa = 3.7HH390 pKa = 6.31GVILGLVSVRR400 pKa = 11.84ADD402 pKa = 3.2LTYY405 pKa = 10.57QQGLQRR411 pKa = 11.84MWSRR415 pKa = 11.84STRR418 pKa = 11.84YY419 pKa = 10.23DD420 pKa = 3.49FYY422 pKa = 11.49FPAFATLGEE431 pKa = 3.95QAILNKK437 pKa = 9.91EE438 pKa = 3.96IYY440 pKa = 8.76VTGSSGDD447 pKa = 3.4NDD449 pKa = 3.28VFGYY453 pKa = 7.2QEE455 pKa = 3.24RR456 pKa = 11.84WAEE459 pKa = 3.71YY460 pKa = 9.05RR461 pKa = 11.84YY462 pKa = 9.04YY463 pKa = 10.13PSRR466 pKa = 11.84ISSLFRR472 pKa = 11.84STAAGTIDD480 pKa = 3.63AWHH483 pKa = 7.2LAQKK487 pKa = 8.59FTATPTLNTTFIQDD501 pKa = 3.74TPPVSRR507 pKa = 11.84VVAVGAAANGQQFIFDD523 pKa = 4.19SFFDD527 pKa = 4.02CKK529 pKa = 10.24KK530 pKa = 10.03ARR532 pKa = 11.84PMPMYY537 pKa = 10.18SVPGLIDD544 pKa = 3.33HH545 pKa = 7.34FYY547 pKa = 8.73MLGGISLGGVTGGLLGFIGQQQTNQNNXGYY577 pKa = 9.99SSSRR581 pKa = 3.34

Molecular weight: 63.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

581

581

581

581.0

63.11

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.917 ± 0.0

0.516 ± 0.0

4.991 ± 0.0

1.893 ± 0.0

5.68 ± 0.0

10.671 ± 0.0

1.893 ± 0.0

5.164 ± 0.0

2.41 ± 0.0

7.229 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.41 ± 0.0

5.164 ± 0.0

4.991 ± 0.0

5.164 ± 0.0

4.991 ± 0.0

7.917 ± 0.0

8.95 ± 0.0

6.024 ± 0.0

1.377 ± 0.0

4.475 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski