Streptococcus satellite phage Javan276

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 7.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 18 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZMW0|A0A4D5ZMW0_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan276 OX=2558600 GN=JavanS276_0015 PE=4 SV=1
MM1 pKa = 7.13YY2 pKa = 10.29NEE4 pKa = 5.34EE5 pKa = 4.08IAKK8 pKa = 9.52MILSFKK14 pKa = 10.68KK15 pKa = 10.12DD16 pKa = 3.11DD17 pKa = 3.97CRR19 pKa = 11.84PEE21 pKa = 4.5EE22 pKa = 4.02FDD24 pKa = 3.64EE25 pKa = 6.11DD26 pKa = 4.71DD27 pKa = 4.61FIEE30 pKa = 4.35TARR33 pKa = 11.84QLIASGQIEE42 pKa = 4.83GKK44 pKa = 10.59LKK46 pKa = 10.66LDD48 pKa = 3.62YY49 pKa = 10.85LSPYY53 pKa = 10.59LDD55 pKa = 4.29LLYY58 pKa = 10.6QKK60 pKa = 10.15QHH62 pKa = 4.59TT63 pKa = 4.03

Molecular weight: 7.49 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZI93|A0A4D5ZI93_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan276 OX=2558600 GN=JavanS276_0017 PE=4 SV=1
MM1 pKa = 7.59KK2 pKa = 10.56LFNKK6 pKa = 9.74KK7 pKa = 10.24CLVCGTRR14 pKa = 11.84FKK16 pKa = 10.3TQSNVSKK23 pKa = 10.74YY24 pKa = 10.81CSDD27 pKa = 3.46NCRR30 pKa = 11.84KK31 pKa = 9.91QSVKK35 pKa = 10.11EE36 pKa = 3.89RR37 pKa = 11.84QKK39 pKa = 11.09QFMKK43 pKa = 10.53EE44 pKa = 3.45KK45 pKa = 9.6RR46 pKa = 11.84KK47 pKa = 10.12KK48 pKa = 9.64IKK50 pKa = 9.89EE51 pKa = 3.95EE52 pKa = 3.63KK53 pKa = 10.0SINRR57 pKa = 11.84RR58 pKa = 11.84SFTNTDD64 pKa = 3.5FKK66 pKa = 10.93KK67 pKa = 10.7APKK70 pKa = 9.16IDD72 pKa = 3.84YY73 pKa = 9.62FDD75 pKa = 6.01PIQKK79 pKa = 10.17KK80 pKa = 7.5MNKK83 pKa = 9.1ALKK86 pKa = 10.15IKK88 pKa = 10.27DD89 pKa = 3.38FKK91 pKa = 10.82TYY93 pKa = 10.68YY94 pKa = 10.08EE95 pKa = 4.36LYY97 pKa = 10.08KK98 pKa = 10.65KK99 pKa = 10.58RR100 pKa = 11.84ILDD103 pKa = 4.21NEE105 pKa = 4.41AEE107 pKa = 3.93WGIVGRR113 pKa = 11.84HH114 pKa = 4.7IVNGIEE120 pKa = 3.91VHH122 pKa = 7.24DD123 pKa = 4.27SDD125 pKa = 5.09FVTMVLKK132 pKa = 10.03TIDD135 pKa = 3.2QQ136 pKa = 3.74

Molecular weight: 16.3 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18

0

18

2995

38

376

166.4

19.51

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.84 ± 0.439

0.801 ± 0.29

6.21 ± 0.364

8.447 ± 0.554

5.008 ± 0.585

3.639 ± 0.436

1.937 ± 0.248

8.715 ± 0.731

10.718 ± 0.679

9.316 ± 0.619

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.27 ± 0.332

7.279 ± 0.461

2.104 ± 0.315

4.107 ± 0.454

4.307 ± 0.466

6.678 ± 0.559

4.775 ± 0.31

4.608 ± 0.537

1.002 ± 0.287

4.24 ± 0.277
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski