Achlya hypogyna

Taxonomy: cellular organisms; Eukaryota; Sar; Stramenopiles; Oomycota; Saprolegniales; Saprolegniaceae; Achlya

Average proteome isoelectric point is 6.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 14400 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1V9Y4U3|A0A1V9Y4U3_9STRA Uncharacterized protein OS=Achlya hypogyna OX=1202772 GN=ACHHYP_17267 PE=4 SV=1
MM1 pKa = 7.17VFLPFVLLALSGVGAAGIALRR22 pKa = 11.84SCCYY26 pKa = 10.22KK27 pKa = 10.75PEE29 pKa = 4.43DD30 pKa = 3.48EE31 pKa = 4.51WRR33 pKa = 11.84DD34 pKa = 3.52PRR36 pKa = 11.84QEE38 pKa = 4.26PLMEE42 pKa = 4.84APNVPATTKK51 pKa = 10.75ASAPSVTPTLAPPPVVKK68 pKa = 10.62SSTPPPTAVVKK79 pKa = 10.37PLDD82 pKa = 4.1GVGGADD88 pKa = 3.53PMVEE92 pKa = 3.87PVACRR97 pKa = 11.84GCGATIDD104 pKa = 4.04PSLAALANSLCIVCSYY120 pKa = 10.88QSIRR124 pKa = 11.84LPSLEE129 pKa = 4.5IEE131 pKa = 4.42QPDD134 pKa = 3.74DD135 pKa = 3.44TFPEE139 pKa = 4.55YY140 pKa = 10.18IANDD144 pKa = 4.03DD145 pKa = 4.83ADD147 pKa = 5.43DD148 pKa = 4.75DD149 pKa = 4.25MDD151 pKa = 4.41GAGYY155 pKa = 10.41DD156 pKa = 4.12DD157 pKa = 5.53DD158 pKa = 3.44MSYY161 pKa = 11.2YY162 pKa = 10.73YY163 pKa = 10.28KK164 pKa = 10.91DD165 pKa = 3.21KK166 pKa = 11.34ARR168 pKa = 11.84TTDD171 pKa = 3.04EE172 pKa = 4.01GTTAEE177 pKa = 4.37MEE179 pKa = 4.47SPQDD183 pKa = 3.92LDD185 pKa = 5.82DD186 pKa = 5.16GALDD190 pKa = 6.08DD191 pKa = 6.11DD192 pKa = 5.58DD193 pKa = 6.19EE194 pKa = 7.59DD195 pKa = 4.57DD196 pKa = 5.21ASSLSQEE203 pKa = 4.1MEE205 pKa = 3.98IPCADD210 pKa = 3.92GEE212 pKa = 4.28PAADD216 pKa = 3.79EE217 pKa = 5.0DD218 pKa = 4.47IEE220 pKa = 4.26IAEE223 pKa = 4.21EE224 pKa = 3.97ALALVQDD231 pKa = 3.99MWDD234 pKa = 3.05IAYY237 pKa = 9.06QAHH240 pKa = 6.91LGAGEE245 pKa = 4.66GPDD248 pKa = 2.94GDD250 pKa = 4.49AFVEE254 pKa = 4.3LALEE258 pKa = 4.51LDD260 pKa = 3.42ATAAAIVKK268 pKa = 9.3EE269 pKa = 3.96PHH271 pKa = 6.21LLSEE275 pKa = 4.53SFHH278 pKa = 6.65FLSQALASLLEE289 pKa = 4.3LVPEE293 pKa = 4.54AWAPHH298 pKa = 5.25VEE300 pKa = 3.87ATEE303 pKa = 4.26LKK305 pKa = 10.69FEE307 pKa = 4.38ALQFRR312 pKa = 11.84YY313 pKa = 9.46HH314 pKa = 6.67SKK316 pKa = 9.31LTVEE320 pKa = 4.89CGLDD324 pKa = 3.45LAAQLYY330 pKa = 9.81EE331 pKa = 4.16LVEE334 pKa = 4.36CASDD338 pKa = 3.73FGVDD342 pKa = 3.37PTVAASVLQGLEE354 pKa = 3.96EE355 pKa = 3.77LAGAVEE361 pKa = 4.26EE362 pKa = 4.89TPCEE366 pKa = 3.84LVSWLNYY373 pKa = 10.19LGATIKK379 pKa = 10.6LLKK382 pKa = 10.19SYY384 pKa = 9.85EE385 pKa = 4.06RR386 pKa = 11.84EE387 pKa = 4.07FEE389 pKa = 5.79DD390 pKa = 3.6VAKK393 pKa = 10.2WDD395 pKa = 3.99DD396 pKa = 3.62VVDD399 pKa = 4.26CEE401 pKa = 4.7RR402 pKa = 11.84HH403 pKa = 5.72LEE405 pKa = 3.89PLQLHH410 pKa = 6.15CWEE413 pKa = 5.16IYY415 pKa = 10.2SPCC418 pKa = 4.06

Molecular weight: 45.18 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1V9YF75|A0A1V9YF75_9STRA Polycystin Cation Channel (PCC) Family OS=Achlya hypogyna OX=1202772 GN=ACHHYP_13415 PE=4 SV=1
MM1 pKa = 7.97PSPFPTSRR9 pKa = 11.84RR10 pKa = 11.84YY11 pKa = 9.43NVSAVEE17 pKa = 3.97ALCVLLNRR25 pKa = 11.84LAWPHH30 pKa = 6.44RR31 pKa = 11.84LGSMVSHH38 pKa = 7.45FGRR41 pKa = 11.84SRR43 pKa = 11.84EE44 pKa = 4.0ALSTIFNAALHH55 pKa = 6.38HH56 pKa = 5.92INEE59 pKa = 4.2RR60 pKa = 11.84FARR63 pKa = 11.84LLKK66 pKa = 10.06WDD68 pKa = 4.0DD69 pKa = 3.33RR70 pKa = 11.84RR71 pKa = 11.84LDD73 pKa = 3.83GRR75 pKa = 11.84WMAACAKK82 pKa = 10.01AIHH85 pKa = 6.64AKK87 pKa = 9.77GAPLDD92 pKa = 3.82SCIGFIDD99 pKa = 3.82GTVRR103 pKa = 11.84GICRR107 pKa = 11.84PKK109 pKa = 10.87NGVQRR114 pKa = 11.84AAYY117 pKa = 9.41NVYY120 pKa = 10.26KK121 pKa = 10.61VLQFQPGLTNN131 pKa = 3.62

Molecular weight: 14.72 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

14400

0

14400

7479346

49

12321

519.4

57.13

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.161 ± 0.03

1.782 ± 0.01

5.538 ± 0.015

5.268 ± 0.022

3.749 ± 0.013

5.858 ± 0.029

2.766 ± 0.011

3.967 ± 0.014

4.353 ± 0.023

10.29 ± 0.028

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.358 ± 0.008

2.988 ± 0.013

5.463 ± 0.022

3.768 ± 0.013

5.828 ± 0.023

6.777 ± 0.025

6.24 ± 0.026

7.73 ± 0.018

1.358 ± 0.008

2.757 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski