Colletotrichum chlorophyti

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum

Average proteome isoelectric point is 6.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10302 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Q8RSF6|A0A1Q8RSF6_9PEZI AP-2 complex subunit alpha OS=Colletotrichum chlorophyti OX=708187 GN=CCHL11_03660 PE=3 SV=1
MM1 pKa = 7.63RR2 pKa = 11.84LIVLAFLTLSTPLISAQDD20 pKa = 3.56VATTITVGPPSPTSEE35 pKa = 4.47PEE37 pKa = 3.89WNSDD41 pKa = 3.42EE42 pKa = 4.5TFTSAVLNSTNFYY55 pKa = 10.3RR56 pKa = 11.84GEE58 pKa = 3.93HH59 pKa = 6.09HH60 pKa = 7.54ASDD63 pKa = 5.02LSWNDD68 pKa = 3.31TLAEE72 pKa = 4.01FADD75 pKa = 5.13DD76 pKa = 4.84YY77 pKa = 11.37LDD79 pKa = 5.31DD80 pKa = 4.53MPGDD84 pKa = 3.84SCDD87 pKa = 3.88FSHH90 pKa = 7.29SGGPYY95 pKa = 10.36GEE97 pKa = 4.61NLAKK101 pKa = 10.56GYY103 pKa = 9.96PNVTASVEE111 pKa = 3.96AWGEE115 pKa = 3.78EE116 pKa = 3.69RR117 pKa = 11.84DD118 pKa = 5.3DD119 pKa = 4.09YY120 pKa = 12.0DD121 pKa = 4.18FDD123 pKa = 4.14EE124 pKa = 6.09GEE126 pKa = 3.98FDD128 pKa = 4.55ADD130 pKa = 3.54TGHH133 pKa = 6.24FTQLVWRR140 pKa = 11.84NTTDD144 pKa = 3.08VGCARR149 pKa = 11.84KK150 pKa = 9.86LCDD153 pKa = 4.13DD154 pKa = 3.85DD155 pKa = 3.0TWYY158 pKa = 10.02IVCEE162 pKa = 3.66YY163 pKa = 9.15WPRR166 pKa = 11.84GNVVDD171 pKa = 4.2QFTDD175 pKa = 3.43QVQEE179 pKa = 3.82AFAARR184 pKa = 11.84TGPKK188 pKa = 9.83LAFLVAVGVATMWTAAA204 pKa = 3.75

Molecular weight: 22.55 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Q8RR24|A0A1Q8RR24_9PEZI Baeyer-Villiger monooxygenase 4 OS=Colletotrichum chlorophyti OX=708187 GN=CCHL11_03865 PE=4 SV=1
MM1 pKa = 7.85PLRR4 pKa = 11.84STRR7 pKa = 11.84HH8 pKa = 4.18TTTTAAPRR16 pKa = 11.84RR17 pKa = 11.84SGGLFSRR24 pKa = 11.84RR25 pKa = 11.84RR26 pKa = 11.84AAPATTSRR34 pKa = 11.84RR35 pKa = 11.84HH36 pKa = 5.05HH37 pKa = 6.42HH38 pKa = 5.62TTTTTTTTRR47 pKa = 11.84PKK49 pKa = 10.46RR50 pKa = 11.84GGLFSRR56 pKa = 11.84RR57 pKa = 11.84RR58 pKa = 11.84GAVTTAPVHH67 pKa = 4.81HH68 pKa = 6.22QRR70 pKa = 11.84RR71 pKa = 11.84KK72 pKa = 9.88PSMSDD77 pKa = 3.22KK78 pKa = 10.84ISGAMLKK85 pKa = 10.72LKK87 pKa = 9.36GTLTRR92 pKa = 11.84RR93 pKa = 11.84PGQKK97 pKa = 9.9AAGTRR102 pKa = 11.84RR103 pKa = 11.84MHH105 pKa = 5.68GTDD108 pKa = 2.92GRR110 pKa = 11.84GSRR113 pKa = 11.84RR114 pKa = 11.84AYY116 pKa = 10.23RR117 pKa = 11.84YY118 pKa = 9.61

Molecular weight: 13.17 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10302

0

10302

5134087

13

11300

498.4

54.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.123 ± 0.021

1.153 ± 0.009

5.73 ± 0.016

6.074 ± 0.021

3.796 ± 0.014

7.142 ± 0.02

2.267 ± 0.01

4.766 ± 0.016

4.864 ± 0.02

8.737 ± 0.023

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.155 ± 0.01

3.688 ± 0.014

6.063 ± 0.026

3.865 ± 0.017

6.003 ± 0.018

7.929 ± 0.023

5.991 ± 0.027

6.418 ± 0.018

1.501 ± 0.009

2.734 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski