Grapevine virus J
Average proteome isoelectric point is 6.74
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A2P1BXX0|A0A2P1BXX0_9VIRU ORF2 OS=Grapevine virus J OX=2093496 PE=4 SV=1
MM1 pKa = 7.43 SISVSSQRR9 pKa = 11.84 MAAAALYY16 pKa = 10.97 NNGDD20 pKa = 3.99 KK21 pKa = 10.71 DD22 pKa = 3.9 TVDD25 pKa = 3.47 QIKK28 pKa = 10.33 KK29 pKa = 10.29 LKK31 pKa = 9.17 TAGLLHH37 pKa = 7.59 SEE39 pKa = 4.55 EE40 pKa = 4.53 EE41 pKa = 4.22 DD42 pKa = 4.0 DD43 pKa = 5.75 GLFDD47 pKa = 4.74 YY48 pKa = 11.33 YY49 pKa = 11.5 VDD51 pKa = 4.7 DD52 pKa = 4.76 DD53 pKa = 3.99 VRR55 pKa = 11.84 DD56 pKa = 3.7 ILGSKK61 pKa = 10.06 GINFSIHH68 pKa = 6.19 SYY70 pKa = 10.09 RR71 pKa = 11.84 NHH73 pKa = 6.28 PHH75 pKa = 6.74 PVSKK79 pKa = 10.19 MLEE82 pKa = 3.66 NHH84 pKa = 6.32 ILYY87 pKa = 10.4 KK88 pKa = 10.6 LAPNYY93 pKa = 10.09 LRR95 pKa = 11.84 EE96 pKa = 3.99 HH97 pKa = 6.17 VLIISCKK104 pKa = 7.11 EE105 pKa = 4.09 SKK107 pKa = 10.99 VKK109 pKa = 9.93 MLLLKK114 pKa = 10.16 NKK116 pKa = 9.56 KK117 pKa = 8.09 MNKK120 pKa = 9.54 NVDD123 pKa = 3.18 SYY125 pKa = 11.98 NRR127 pKa = 11.84 LVHH130 pKa = 6.71 AKK132 pKa = 9.97 DD133 pKa = 2.94 HH134 pKa = 5.65 FRR136 pKa = 11.84 YY137 pKa = 8.83 VQAVKK142 pKa = 8.98 EE143 pKa = 4.13 TSIPCSTTFSEE154 pKa = 4.97 KK155 pKa = 10.09 EE156 pKa = 3.86 SHH158 pKa = 6.87 ADD160 pKa = 3.69 DD161 pKa = 4.43 IFIHH165 pKa = 7.61 DD166 pKa = 4.22 EE167 pKa = 3.83 VQYY170 pKa = 10.75 WNLHH174 pKa = 4.65 EE175 pKa = 4.42 MQDD178 pKa = 3.59 FLGTLRR184 pKa = 11.84 RR185 pKa = 11.84 CTRR188 pKa = 11.84 VIYY191 pKa = 10.32 SIVYY195 pKa = 8.27 PAEE198 pKa = 3.73 VDD200 pKa = 3.59 VGFEE204 pKa = 3.7 ASIFPEE210 pKa = 4.91 AYY212 pKa = 9.74 DD213 pKa = 3.79 FRR215 pKa = 11.84 ISGEE219 pKa = 4.11 GFIWMPDD226 pKa = 3.31 GNSEE230 pKa = 4.03 GSYY233 pKa = 8.66 WQPKK237 pKa = 9.22 NSWLLSTSKK246 pKa = 9.89 TIDD249 pKa = 3.23 SEE251 pKa = 4.31 GRR253 pKa = 11.84 TWTITKK259 pKa = 9.97 LNSIASHH266 pKa = 6.46 HH267 pKa = 6.55 LFACTLGSTINEE279 pKa = 4.21 SEE281 pKa = 4.26 YY282 pKa = 10.73 EE283 pKa = 4.29 YY284 pKa = 11.43 ADD286 pKa = 3.42 STVIHH291 pKa = 6.6 PMFNLRR297 pKa = 11.84 GLRR300 pKa = 11.84 DD301 pKa = 3.68 YY302 pKa = 11.55 RR303 pKa = 11.84 DD304 pKa = 3.03 MRR306 pKa = 11.84 LRR308 pKa = 11.84 TRR310 pKa = 11.84 YY311 pKa = 9.15 IRR313 pKa = 11.84 PVLLYY318 pKa = 10.74 LLALRR323 pKa = 11.84 KK324 pKa = 9.23 PDD326 pKa = 4.03 PEE328 pKa = 4.16 SAVAKK333 pKa = 10.5 LRR335 pKa = 11.84 MLSHH339 pKa = 6.87 KK340 pKa = 10.23 NEE342 pKa = 4.23 SMHH345 pKa = 6.25 EE346 pKa = 3.97 ALFVAQLAKK355 pKa = 10.4 QIRR358 pKa = 11.84 DD359 pKa = 3.15 TSLYY363 pKa = 11.16 DD364 pKa = 3.52 RR365 pKa = 11.84 MGNFNLKK372 pKa = 10.2 SAVGNSFKK380 pKa = 10.87 EE381 pKa = 3.92 WLGPNATYY389 pKa = 10.45 FLDD392 pKa = 3.54 RR393 pKa = 11.84 SGYY396 pKa = 8.85 HH397 pKa = 6.22 ANSLEE402 pKa = 4.18 SFIKK406 pKa = 10.59 NCDD409 pKa = 3.07 NVRR412 pKa = 11.84 FSISRR417 pKa = 11.84 TYY419 pKa = 10.05 RR420 pKa = 11.84 EE421 pKa = 3.83 RR422 pKa = 11.84 VIKK425 pKa = 8.37 VHH427 pKa = 6.91 PIILSDD433 pKa = 4.5 LEE435 pKa = 4.42 WGSEE439 pKa = 4.34 GTWDD443 pKa = 3.74 MVYY446 pKa = 10.85 LSNLISMDD454 pKa = 3.92 RR455 pKa = 11.84 EE456 pKa = 3.91 HH457 pKa = 6.65 TPYY460 pKa = 10.82 VLNASEE466 pKa = 4.41 VIGRR470 pKa = 11.84 VTSFPLGRR478 pKa = 11.84 ILRR481 pKa = 11.84 AWEE484 pKa = 5.02 LIADD488 pKa = 4.19 MCQRR492 pKa = 11.84 NEE494 pKa = 3.65 VNYY497 pKa = 10.39 NRR499 pKa = 11.84 VVYY502 pKa = 10.91 VFDD505 pKa = 4.56 QEE507 pKa = 5.3 DD508 pKa = 4.37 LINLKK513 pKa = 10.67 SYY515 pKa = 10.26 LIKK518 pKa = 10.93 VNTYY522 pKa = 9.91 EE523 pKa = 4.23 YY524 pKa = 9.26 VTSRR528 pKa = 11.84 AIKK531 pKa = 10.23 YY532 pKa = 8.6 DD533 pKa = 3.36 WKK535 pKa = 10.51 PQDD538 pKa = 3.36 VKK540 pKa = 10.98 QGYY543 pKa = 8.81 LSSGAYY549 pKa = 10.67 LNFLKK554 pKa = 9.31 PTQSEE559 pKa = 4.36 RR560 pKa = 11.84 ATVVSGDD567 pKa = 3.59 EE568 pKa = 4.24 QEE570 pKa = 5.48 DD571 pKa = 4.12 EE572 pKa = 4.57 EE573 pKa = 4.66 EE574 pKa = 4.18 KK575 pKa = 10.83 CACGLCLTSKK585 pKa = 9.37 TLSAALTNDD594 pKa = 3.28 LVVQLEE600 pKa = 4.65 AIPLFNEE607 pKa = 3.84 LNKK610 pKa = 10.25 NRR612 pKa = 11.84 LSAFFSRR619 pKa = 11.84 HH620 pKa = 3.87 SAEE623 pKa = 3.61 YY624 pKa = 9.04 AYY626 pKa = 10.53 RR627 pKa = 11.84 GGSHH631 pKa = 6.35 QSRR634 pKa = 11.84 GWLDD638 pKa = 3.32 VLDD641 pKa = 4.53 KK642 pKa = 11.14 LRR644 pKa = 11.84 SALGLGDD651 pKa = 5.72 DD652 pKa = 4.78 FDD654 pKa = 4.9 HH655 pKa = 7.27 CLVQRR660 pKa = 11.84 YY661 pKa = 7.32 EE662 pKa = 4.04 RR663 pKa = 11.84 GSGIGFHH670 pKa = 7.3 ADD672 pKa = 3.89 DD673 pKa = 4.76 EE674 pKa = 4.7 EE675 pKa = 6.2 CYY677 pKa = 10.69 LPGMKK682 pKa = 9.88 VVTVNVGGQCTFSVKK697 pKa = 10.67 CKK699 pKa = 10.52 DD700 pKa = 3.62 NSIKK704 pKa = 10.46 DD705 pKa = 3.84 FKK707 pKa = 11.34 LDD709 pKa = 3.71 GPSVLVMGAGAQVDD723 pKa = 3.93 HH724 pKa = 6.86 KK725 pKa = 10.71 HH726 pKa = 5.96 RR727 pKa = 11.84 VQDD730 pKa = 3.79 CSDD733 pKa = 3.19 GRR735 pKa = 11.84 LSITLRR741 pKa = 11.84 NKK743 pKa = 9.06 TKK745 pKa = 10.69 DD746 pKa = 3.78 YY747 pKa = 10.97 IDD749 pKa = 4.51 DD750 pKa = 4.15 ASGSEE755 pKa = 4.19 YY756 pKa = 10.77 EE757 pKa = 4.18 EE758 pKa = 4.19 EE759 pKa = 4.23 RR760 pKa = 11.84 LDD762 pKa = 5.15 GEE764 pKa = 4.79 DD765 pKa = 4.05 LFARR769 pKa = 11.84 LDD771 pKa = 3.52 KK772 pKa = 11.18 DD773 pKa = 3.68 KK774 pKa = 11.7 SFLCSIQCIAEE785 pKa = 4.08 HH786 pKa = 6.05 MRR788 pKa = 11.84 VDD790 pKa = 4.19 VPTCTALIAGKK801 pKa = 8.52 DD802 pKa = 3.61 TQVLNEE808 pKa = 3.9 ISKK811 pKa = 11.14 GGVTLATMINLCKK824 pKa = 10.59 SLDD827 pKa = 3.52 IEE829 pKa = 4.48 TTITGEE835 pKa = 3.95 GSVYY839 pKa = 10.04 IAGSFRR845 pKa = 11.84 PLFLSLEE852 pKa = 4.31 KK853 pKa = 10.79 GHH855 pKa = 6.32 LVRR858 pKa = 11.84 VNEE861 pKa = 4.76 GYY863 pKa = 10.39 SDD865 pKa = 3.83 RR866 pKa = 11.84 SSVSALKK873 pKa = 10.66 LNKK876 pKa = 10.27 NITKK880 pKa = 10.44 CSFTTDD886 pKa = 2.99 AAKK889 pKa = 10.74 ARR891 pKa = 11.84 VLAEE895 pKa = 4.23 SYY897 pKa = 10.76 KK898 pKa = 10.58 EE899 pKa = 4.39 GYY901 pKa = 8.41 TGILLNRR908 pKa = 11.84 FKK910 pKa = 10.89 SGKK913 pKa = 9.14 CFKK916 pKa = 10.87 GDD918 pKa = 3.23 WDD920 pKa = 3.88 EE921 pKa = 5.51 KK922 pKa = 10.68 EE923 pKa = 4.13 VSVWLSTGFAGSGKK937 pKa = 8.45 SHH939 pKa = 7.25 YY940 pKa = 9.44 IQSVLKK946 pKa = 8.57 NCEE949 pKa = 3.76 VEE951 pKa = 3.98 RR952 pKa = 11.84 TLIITPRR959 pKa = 11.84 KK960 pKa = 9.71 NLAADD965 pKa = 3.45 WAKK968 pKa = 10.64 KK969 pKa = 9.29 VSKK972 pKa = 9.62 KK973 pKa = 10.29 HH974 pKa = 5.94 KK975 pKa = 10.41 VVTLEE980 pKa = 3.83 KK981 pKa = 10.81 ALLNDD986 pKa = 3.42 YY987 pKa = 10.62 TDD989 pKa = 3.76 FRR991 pKa = 11.84 SIVIDD996 pKa = 4.35 EE997 pKa = 4.85 IGLFPPGYY1005 pKa = 10.51 LDD1007 pKa = 3.82 LLVYY1011 pKa = 9.26 ATRR1014 pKa = 11.84 CTNYY1018 pKa = 9.87 VVLGDD1023 pKa = 4.38 PLQCAYY1029 pKa = 10.64 YY1030 pKa = 10.22 SKK1032 pKa = 10.51 EE1033 pKa = 3.77 DD1034 pKa = 4.19 SIILEE1039 pKa = 4.26 KK1040 pKa = 11.19 NNEE1043 pKa = 4.08 NIYY1046 pKa = 10.95 KK1047 pKa = 9.74 RR1048 pKa = 11.84 FHH1050 pKa = 5.82 GMKK1053 pKa = 9.41 VYY1055 pKa = 10.8 LMYY1058 pKa = 10.69 SHH1060 pKa = 7.38 RR1061 pKa = 11.84 LKK1063 pKa = 10.7 PNKK1066 pKa = 10.1 LFDD1069 pKa = 3.88 IEE1071 pKa = 4.56 CSGEE1075 pKa = 4.31 GISGQEE1081 pKa = 4.27 DD1082 pKa = 3.72 PSKK1085 pKa = 10.83 RR1086 pKa = 11.84 PVIVASRR1093 pKa = 11.84 AEE1095 pKa = 4.32 KK1096 pKa = 10.36 LKK1098 pKa = 10.67 QPNGYY1103 pKa = 7.43 TVSEE1107 pKa = 4.35 TQGLTFKK1114 pKa = 11.09 DD1115 pKa = 3.68 SVVKK1119 pKa = 10.7 LDD1121 pKa = 3.92 RR1122 pKa = 11.84 DD1123 pKa = 3.7 WVRR1126 pKa = 11.84 KK1127 pKa = 9.65 GDD1129 pKa = 3.63 GDD1131 pKa = 4.05 VVVAFSRR1138 pKa = 11.84 HH1139 pKa = 5.83 RR1140 pKa = 11.84 GDD1142 pKa = 4.06 CEE1144 pKa = 3.72 IVASKK1149 pKa = 10.72 SDD1151 pKa = 3.41 KK1152 pKa = 10.76 EE1153 pKa = 3.97 YY1154 pKa = 10.72 LIKK1157 pKa = 10.94 NSEE1160 pKa = 4.02 SLMLKK1165 pKa = 10.16 KK1166 pKa = 10.28 ILVNEE1171 pKa = 4.63 TISRR1175 pKa = 11.84 LDD1177 pKa = 2.93 LCEE1180 pKa = 4.0 RR1181 pKa = 11.84 VKK1183 pKa = 11.09 QEE1185 pKa = 3.41 MDD1187 pKa = 3.07 EE1188 pKa = 4.58 VNFSFSEE1195 pKa = 3.93 DD1196 pKa = 2.82 RR1197 pKa = 11.84 LANSEE1202 pKa = 4.15 EE1203 pKa = 4.19 FEE1205 pKa = 4.3 EE1206 pKa = 4.57 RR1207 pKa = 11.84 LSGDD1211 pKa = 3.73 PYY1213 pKa = 11.46 LKK1215 pKa = 10.76 ALLNILEE1222 pKa = 4.77 EE1223 pKa = 4.16 IQEE1226 pKa = 4.35 EE1227 pKa = 4.64 EE1228 pKa = 4.1 IEE1230 pKa = 4.34 MPEE1233 pKa = 4.1 PEE1235 pKa = 4.5 APEE1238 pKa = 4.0 PLRR1241 pKa = 11.84 THH1243 pKa = 7.0 LPLSEE1248 pKa = 4.48 KK1249 pKa = 10.74 LNEE1252 pKa = 4.41 LEE1254 pKa = 4.15 PTNLKK1259 pKa = 10.56 AKK1261 pKa = 9.84 EE1262 pKa = 3.95 DD1263 pKa = 4.08 RR1264 pKa = 11.84 EE1265 pKa = 4.34 VLTSFGLTDD1274 pKa = 3.82 QIDD1277 pKa = 3.78 DD1278 pKa = 3.79 QGFKK1282 pKa = 10.58 SSPGPQTHH1290 pKa = 6.6 KK1291 pKa = 10.99 ALYY1294 pKa = 9.18 LHH1296 pKa = 7.2 HH1297 pKa = 7.85 DD1298 pKa = 4.03 SQDD1301 pKa = 3.27 DD1302 pKa = 3.74 ATFMLSVKK1310 pKa = 10.04 KK1311 pKa = 10.38 RR1312 pKa = 11.84 LRR1314 pKa = 11.84 FRR1316 pKa = 11.84 DD1317 pKa = 3.25 MEE1319 pKa = 4.36 TNMRR1323 pKa = 11.84 KK1324 pKa = 9.47 FKK1326 pKa = 10.03 EE1327 pKa = 4.32 CEE1329 pKa = 3.92 GVGPQLFHH1337 pKa = 6.72 EE1338 pKa = 4.74 LKK1340 pKa = 9.35 KK1341 pKa = 8.92 TYY1343 pKa = 9.93 NWTRR1347 pKa = 11.84 VEE1349 pKa = 3.98 QLPALDD1355 pKa = 4.14 KK1356 pKa = 11.3 CDD1358 pKa = 4.2 ADD1360 pKa = 3.88 FLKK1363 pKa = 10.84 KK1364 pKa = 10.58 RR1365 pKa = 11.84 IQKK1368 pKa = 9.14 SAKK1371 pKa = 9.33 LIEE1374 pKa = 4.07 RR1375 pKa = 11.84 HH1376 pKa = 5.68 SYY1378 pKa = 10.16 RR1379 pKa = 11.84 SSPDD1383 pKa = 2.74 WPSNYY1388 pKa = 10.21 LKK1390 pKa = 10.93 VFLKK1394 pKa = 10.85 NQTCTKK1400 pKa = 9.79 LEE1402 pKa = 3.94 KK1403 pKa = 10.4 RR1404 pKa = 11.84 GVDD1407 pKa = 3.22 AKK1409 pKa = 10.85 AGQTIACFCHH1419 pKa = 6.69 SVLCRR1424 pKa = 11.84 FGTKK1428 pKa = 9.73 LRR1430 pKa = 11.84 QTEE1433 pKa = 4.11 KK1434 pKa = 10.77 ALKK1437 pKa = 10.54 NMLPANVMIYY1447 pKa = 8.38 SQKK1450 pKa = 10.88 NYY1452 pKa = 10.57 SDD1454 pKa = 3.61 LDD1456 pKa = 3.54 KK1457 pKa = 10.58 WCKK1460 pKa = 9.6 TFVNSFTGTDD1470 pKa = 3.08 SDD1472 pKa = 4.37 YY1473 pKa = 11.39 EE1474 pKa = 4.19 AFDD1477 pKa = 3.7 RR1478 pKa = 11.84 SQDD1481 pKa = 3.5 EE1482 pKa = 4.31 KK1483 pKa = 10.92 ILRR1486 pKa = 11.84 LEE1488 pKa = 4.12 VEE1490 pKa = 4.2 VLKK1493 pKa = 10.98 FFLWEE1498 pKa = 3.77 EE1499 pKa = 4.02 EE1500 pKa = 4.61 LINEE1504 pKa = 4.23 YY1505 pKa = 9.04 VTLKK1509 pKa = 11.26 LMMGCSLGNLAIMRR1523 pKa = 11.84 FSGEE1527 pKa = 3.46 FGTFFFNTVANMAFSCMRR1545 pKa = 11.84 YY1546 pKa = 8.71 NLSYY1550 pKa = 9.54 NTPICFAGDD1559 pKa = 3.56 DD1560 pKa = 4.15 MYY1562 pKa = 11.81 SPGQLNVRR1570 pKa = 11.84 HH1571 pKa = 6.93 DD1572 pKa = 3.99 YY1573 pKa = 11.63 DD1574 pKa = 3.89 KK1575 pKa = 11.39 FLDD1578 pKa = 3.88 TLEE1581 pKa = 5.01 LKK1583 pKa = 10.94 AKK1585 pKa = 10.56 VNFGDD1590 pKa = 4.38 KK1591 pKa = 10.5 PLFCGWRR1598 pKa = 11.84 MSPYY1602 pKa = 10.54 GIVKK1606 pKa = 9.83 EE1607 pKa = 4.33 PNLILDD1613 pKa = 3.69 RR1614 pKa = 11.84 WKK1616 pKa = 10.4 IAEE1619 pKa = 4.28 GKK1621 pKa = 10.87 GNLKK1625 pKa = 10.57 DD1626 pKa = 3.92 CLVNYY1631 pKa = 10.18 ALEE1634 pKa = 4.1 AVYY1637 pKa = 9.89 GYY1639 pKa = 10.6 RR1640 pKa = 11.84 LSEE1643 pKa = 4.17 FLYY1646 pKa = 10.4 EE1647 pKa = 4.2 LNIDD1651 pKa = 3.32 IDD1653 pKa = 4.02 AQQEE1657 pKa = 4.06 LTRR1660 pKa = 11.84 KK1661 pKa = 8.47 IVKK1664 pKa = 10.16 VKK1666 pKa = 10.63 DD1667 pKa = 3.4 QLPEE1671 pKa = 4.53 KK1672 pKa = 10.18 ISRR1675 pKa = 11.84 LFSRR1679 pKa = 11.84 DD1680 pKa = 3.32 ATEE1683 pKa = 3.84 HH1684 pKa = 5.83 WSDD1687 pKa = 3.87 GEE1689 pKa = 4.7 SEE1691 pKa = 4.59 VLQCTPEE1698 pKa = 5.63 GEE1700 pKa = 4.49 LII1702 pKa = 4.0
Molecular weight: 194.66 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 5.724
IPC2_protein 5.741
IPC_protein 5.779
Toseland 6.084
ProMoST 6.122
Dawson 6.02
Bjellqvist 6.046
Wikipedia 6.02
Rodwell 6.008
Grimsley 6.198
Solomon 6.02
Lehninger 6.008
Nozaki 6.287
DTASelect 6.465
Thurlkill 6.465
EMBOSS 6.415
Sillero 6.376
Patrickios 4.126
IPC_peptide 6.033
IPC2_peptide 6.338
IPC2.peptide.svr19 6.39
Protein with the highest isoelectric point:
>tr|A0A2P1BXX8|A0A2P1BXX8_9VIRU Coat protein OS=Grapevine virus J OX=2093496 PE=4 SV=1
MM1 pKa = 7.63 EE2 pKa = 5.24 GLSRR6 pKa = 11.84 SQRR9 pKa = 11.84 IRR11 pKa = 11.84 EE12 pKa = 4.33 AIKK15 pKa = 9.71 TLVLADD21 pKa = 4.32 AKK23 pKa = 10.31 PVEE26 pKa = 4.39 RR27 pKa = 11.84 PEE29 pKa = 3.88 EE30 pKa = 4.05 SGYY33 pKa = 10.74 DD34 pKa = 3.0 QGMYY38 pKa = 10.62 LRR40 pKa = 11.84 TLFGYY45 pKa = 9.68 IALVGTSKK53 pKa = 10.84 KK54 pKa = 10.22 AVHH57 pKa = 6.45 EE58 pKa = 4.3 YY59 pKa = 10.44 EE60 pKa = 4.16 VDD62 pKa = 3.09 ILGPKK67 pKa = 9.13 SNKK70 pKa = 9.64 NNLDD74 pKa = 3.2 SRR76 pKa = 11.84 GKK78 pKa = 10.05 INIAEE83 pKa = 4.37 KK84 pKa = 10.64 VLSLMTLSRR93 pKa = 11.84 AVSEE97 pKa = 4.7 GPLVGATLRR106 pKa = 11.84 QMCEE110 pKa = 3.51 PFAQEE115 pKa = 4.09 AYY117 pKa = 10.59 EE118 pKa = 4.15 MLTKK122 pKa = 10.31 LAQMGIYY129 pKa = 9.62 SQLAKK134 pKa = 10.62 KK135 pKa = 9.98 MSRR138 pKa = 11.84 LGNKK142 pKa = 8.75 EE143 pKa = 3.97 PQVMFDD149 pKa = 3.97 FASGLDD155 pKa = 3.77 LSKK158 pKa = 10.53 LTLQEE163 pKa = 3.96 ATVVQAMHH171 pKa = 6.27 SRR173 pKa = 11.84 LFRR176 pKa = 11.84 TEE178 pKa = 3.47 GAKK181 pKa = 10.53 GVFNAQSSVGEE192 pKa = 3.94 QAVEE196 pKa = 3.8 II197 pKa = 4.53
Molecular weight: 21.73 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 7.741
IPC2_protein 7.834
IPC_protein 8.024
Toseland 8.536
ProMoST 8.317
Dawson 8.741
Bjellqvist 8.595
Wikipedia 8.814
Rodwell 8.829
Grimsley 8.434
Solomon 9.033
Lehninger 9.004
Nozaki 8.697
DTASelect 8.565
Thurlkill 8.668
EMBOSS 8.946
Sillero 8.843
Patrickios 4.774
IPC_peptide 9.019
IPC2_peptide 7.366
IPC2.peptide.svr19 7.488
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5
0
5
2439
103
1702
487.8
55.43
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
5.371 ± 0.781
2.255 ± 0.31
6.765 ± 0.739
7.421 ± 0.534
3.977 ± 0.423
6.355 ± 1.079
2.255 ± 0.572
4.961 ± 0.24
7.216 ± 0.811
10.414 ± 0.799
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.378 ± 0.49
4.346 ± 0.573
3.116 ± 0.105
2.952 ± 0.479
6.109 ± 0.917
7.995 ± 0.277
4.469 ± 0.394
6.724 ± 0.79
1.148 ± 0.295
3.772 ± 0.606
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here