Amino acid dipepetide frequency for Hubei arthropod virus 1

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
7.087AlaAla: 7.087 ± 0.0
1.063AlaCys: 1.063 ± 0.0
4.607AlaAsp: 4.607 ± 0.0
3.544AlaGlu: 3.544 ± 0.0
3.898AlaPhe: 3.898 ± 0.0
4.607AlaGly: 4.607 ± 0.0
1.417AlaHis: 1.417 ± 0.0
4.961AlaIle: 4.961 ± 0.0
2.481AlaLys: 2.481 ± 0.0
12.048AlaLeu: 12.048 ± 0.0
1.417AlaMet: 1.417 ± 0.0
2.835AlaAsn: 2.835 ± 0.0
4.252AlaPro: 4.252 ± 0.0
4.252AlaGln: 4.252 ± 0.0
4.961AlaArg: 4.961 ± 0.0
7.796AlaSer: 7.796 ± 0.0
7.087AlaThr: 7.087 ± 0.0
6.024AlaVal: 6.024 ± 0.0
0.709AlaTrp: 0.709 ± 0.0
3.544AlaTyr: 3.544 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
2.126CysAla: 2.126 ± 0.0
0.709CysCys: 0.709 ± 0.0
0.0CysAsp: 0.0 ± 0.0
0.354CysGlu: 0.354 ± 0.0
1.063CysPhe: 1.063 ± 0.0
1.417CysGly: 1.417 ± 0.0
0.354CysHis: 0.354 ± 0.0
0.354CysIle: 0.354 ± 0.0
0.354CysLys: 0.354 ± 0.0
1.063CysLeu: 1.063 ± 0.0
0.354CysMet: 0.354 ± 0.0
0.709CysAsn: 0.709 ± 0.0
1.063CysPro: 1.063 ± 0.0
0.354CysGln: 0.354 ± 0.0
0.709CysArg: 0.709 ± 0.0
1.417CysSer: 1.417 ± 0.0
1.063CysThr: 1.063 ± 0.0
0.709CysVal: 0.709 ± 0.0
0.0CysTrp: 0.0 ± 0.0
1.063CysTyr: 1.063 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.607AspAla: 4.607 ± 0.0
1.063AspCys: 1.063 ± 0.0
4.607AspAsp: 4.607 ± 0.0
2.126AspGlu: 2.126 ± 0.0
3.189AspPhe: 3.189 ± 0.0
3.544AspGly: 3.544 ± 0.0
0.709AspHis: 0.709 ± 0.0
4.607AspIle: 4.607 ± 0.0
5.67AspLys: 5.67 ± 0.0
4.252AspLeu: 4.252 ± 0.0
0.709AspMet: 0.709 ± 0.0
1.063AspAsn: 1.063 ± 0.0
3.189AspPro: 3.189 ± 0.0
1.417AspGln: 1.417 ± 0.0
1.063AspArg: 1.063 ± 0.0
4.961AspSer: 4.961 ± 0.0
5.67AspThr: 5.67 ± 0.0
3.544AspVal: 3.544 ± 0.0
0.709AspTrp: 0.709 ± 0.0
2.481AspTyr: 2.481 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
6.378GluAla: 6.378 ± 0.0
0.354GluCys: 0.354 ± 0.0
3.189GluAsp: 3.189 ± 0.0
2.126GluGlu: 2.126 ± 0.0
2.481GluPhe: 2.481 ± 0.0
2.481GluGly: 2.481 ± 0.0
1.417GluHis: 1.417 ± 0.0
2.126GluIle: 2.126 ± 0.0
1.772GluLys: 1.772 ± 0.0
4.252GluLeu: 4.252 ± 0.0
1.417GluMet: 1.417 ± 0.0
3.898GluAsn: 3.898 ± 0.0
0.709GluPro: 0.709 ± 0.0
2.126GluGln: 2.126 ± 0.0
4.252GluArg: 4.252 ± 0.0
2.481GluSer: 2.481 ± 0.0
3.544GluThr: 3.544 ± 0.0
4.252GluVal: 4.252 ± 0.0
0.709GluTrp: 0.709 ± 0.0
3.189GluTyr: 3.189 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.126PheAla: 2.126 ± 0.0
1.063PheCys: 1.063 ± 0.0
2.126PheAsp: 2.126 ± 0.0
4.252PheGlu: 4.252 ± 0.0
1.772PhePhe: 1.772 ± 0.0
2.835PheGly: 2.835 ± 0.0
0.709PheHis: 0.709 ± 0.0
1.417PheIle: 1.417 ± 0.0
0.709PheLys: 0.709 ± 0.0
1.063PheLeu: 1.063 ± 0.0
1.772PheMet: 1.772 ± 0.0
2.126PheAsn: 2.126 ± 0.0
1.063PhePro: 1.063 ± 0.0
1.063PheGln: 1.063 ± 0.0
3.898PheArg: 3.898 ± 0.0
1.417PheSer: 1.417 ± 0.0
3.898PheThr: 3.898 ± 0.0
5.315PheVal: 5.315 ± 0.0
1.772PheTrp: 1.772 ± 0.0
0.709PheTyr: 0.709 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
4.607GlyAla: 4.607 ± 0.0
0.0GlyCys: 0.0 ± 0.0
3.544GlyAsp: 3.544 ± 0.0
1.772GlyGlu: 1.772 ± 0.0
0.709GlyPhe: 0.709 ± 0.0
1.772GlyGly: 1.772 ± 0.0
0.354GlyHis: 0.354 ± 0.0
3.544GlyIle: 3.544 ± 0.0
3.898GlyLys: 3.898 ± 0.0
3.544GlyLeu: 3.544 ± 0.0
1.063GlyMet: 1.063 ± 0.0
1.417GlyAsn: 1.417 ± 0.0
2.835GlyPro: 2.835 ± 0.0
1.063GlyGln: 1.063 ± 0.0
2.481GlyArg: 2.481 ± 0.0
4.607GlySer: 4.607 ± 0.0
5.315GlyThr: 5.315 ± 0.0
3.189GlyVal: 3.189 ± 0.0
0.0GlyTrp: 0.0 ± 0.0
2.481GlyTyr: 2.481 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.772HisAla: 1.772 ± 0.0
0.0HisCys: 0.0 ± 0.0
1.772HisAsp: 1.772 ± 0.0
1.772HisGlu: 1.772 ± 0.0
0.709HisPhe: 0.709 ± 0.0
0.709HisGly: 0.709 ± 0.0
0.0HisHis: 0.0 ± 0.0
1.063HisIle: 1.063 ± 0.0
0.709HisLys: 0.709 ± 0.0
1.063HisLeu: 1.063 ± 0.0
0.354HisMet: 0.354 ± 0.0
0.354HisAsn: 0.354 ± 0.0
1.063HisPro: 1.063 ± 0.0
0.354HisGln: 0.354 ± 0.0
1.417HisArg: 1.417 ± 0.0
1.772HisSer: 1.772 ± 0.0
2.126HisThr: 2.126 ± 0.0
0.709HisVal: 0.709 ± 0.0
0.0HisTrp: 0.0 ± 0.0
0.709HisTyr: 0.709 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
6.024IleAla: 6.024 ± 0.0
1.063IleCys: 1.063 ± 0.0
1.417IleAsp: 1.417 ± 0.0
3.544IleGlu: 3.544 ± 0.0
2.126IlePhe: 2.126 ± 0.0
2.481IleGly: 2.481 ± 0.0
0.354IleHis: 0.354 ± 0.0
3.898IleIle: 3.898 ± 0.0
2.835IleLys: 2.835 ± 0.0
2.835IleLeu: 2.835 ± 0.0
1.417IleMet: 1.417 ± 0.0
3.544IleAsn: 3.544 ± 0.0
2.481IlePro: 2.481 ± 0.0
2.481IleGln: 2.481 ± 0.0
3.898IleArg: 3.898 ± 0.0
1.772IleSer: 1.772 ± 0.0
4.252IleThr: 4.252 ± 0.0
4.252IleVal: 4.252 ± 0.0
1.417IleTrp: 1.417 ± 0.0
1.772IleTyr: 1.772 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
4.252LysAla: 4.252 ± 0.0
0.709LysCys: 0.709 ± 0.0
2.835LysAsp: 2.835 ± 0.0
2.126LysGlu: 2.126 ± 0.0
2.481LysPhe: 2.481 ± 0.0
2.126LysGly: 2.126 ± 0.0
0.709LysHis: 0.709 ± 0.0
2.835LysIle: 2.835 ± 0.0
1.772LysLys: 1.772 ± 0.0
3.898LysLeu: 3.898 ± 0.0
0.0LysMet: 0.0 ± 0.0
3.189LysAsn: 3.189 ± 0.0
2.126LysPro: 2.126 ± 0.0
2.126LysGln: 2.126 ± 0.0
2.835LysArg: 2.835 ± 0.0
2.835LysSer: 2.835 ± 0.0
4.961LysThr: 4.961 ± 0.0
1.063LysVal: 1.063 ± 0.0
0.709LysTrp: 0.709 ± 0.0
0.709LysTyr: 0.709 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
7.442LeuAla: 7.442 ± 0.0
1.417LeuCys: 1.417 ± 0.0
3.898LeuAsp: 3.898 ± 0.0
4.252LeuGlu: 4.252 ± 0.0
4.252LeuPhe: 4.252 ± 0.0
3.189LeuGly: 3.189 ± 0.0
1.063LeuHis: 1.063 ± 0.0
3.189LeuIle: 3.189 ± 0.0
4.607LeuLys: 4.607 ± 0.0
5.67LeuLeu: 5.67 ± 0.0
2.481LeuMet: 2.481 ± 0.0
3.189LeuAsn: 3.189 ± 0.0
3.898LeuPro: 3.898 ± 0.0
2.835LeuGln: 2.835 ± 0.0
7.087LeuArg: 7.087 ± 0.0
4.252LeuSer: 4.252 ± 0.0
5.67LeuThr: 5.67 ± 0.0
7.442LeuVal: 7.442 ± 0.0
0.709LeuTrp: 0.709 ± 0.0
2.481LeuTyr: 2.481 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
0.709MetAla: 0.709 ± 0.0
0.354MetCys: 0.354 ± 0.0
2.481MetAsp: 2.481 ± 0.0
1.417MetGlu: 1.417 ± 0.0
0.709MetPhe: 0.709 ± 0.0
1.063MetGly: 1.063 ± 0.0
0.709MetHis: 0.709 ± 0.0
0.354MetIle: 0.354 ± 0.0
1.417MetLys: 1.417 ± 0.0
2.126MetLeu: 2.126 ± 0.0
0.354MetMet: 0.354 ± 0.0
1.063MetAsn: 1.063 ± 0.0
1.063MetPro: 1.063 ± 0.0
0.709MetGln: 0.709 ± 0.0
2.481MetArg: 2.481 ± 0.0
2.481MetSer: 2.481 ± 0.0
1.417MetThr: 1.417 ± 0.0
2.481MetVal: 2.481 ± 0.0
0.354MetTrp: 0.354 ± 0.0
0.354MetTyr: 0.354 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
4.607AsnAla: 4.607 ± 0.0
0.709AsnCys: 0.709 ± 0.0
2.481AsnAsp: 2.481 ± 0.0
2.481AsnGlu: 2.481 ± 0.0
3.189AsnPhe: 3.189 ± 0.0
1.417AsnGly: 1.417 ± 0.0
1.417AsnHis: 1.417 ± 0.0
2.835AsnIle: 2.835 ± 0.0
0.354AsnLys: 0.354 ± 0.0
3.544AsnLeu: 3.544 ± 0.0
0.709AsnMet: 0.709 ± 0.0
1.417AsnAsn: 1.417 ± 0.0
2.481AsnPro: 2.481 ± 0.0
0.354AsnGln: 0.354 ± 0.0
0.354AsnArg: 0.354 ± 0.0
4.607AsnSer: 4.607 ± 0.0
3.544AsnThr: 3.544 ± 0.0
5.315AsnVal: 5.315 ± 0.0
0.709AsnTrp: 0.709 ± 0.0
2.481AsnTyr: 2.481 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
3.898ProAla: 3.898 ± 0.0
0.709ProCys: 0.709 ± 0.0
2.126ProAsp: 2.126 ± 0.0
2.481ProGlu: 2.481 ± 0.0
3.189ProPhe: 3.189 ± 0.0
2.126ProGly: 2.126 ± 0.0
1.772ProHis: 1.772 ± 0.0
2.481ProIle: 2.481 ± 0.0
3.189ProLys: 3.189 ± 0.0
3.898ProLeu: 3.898 ± 0.0
1.417ProMet: 1.417 ± 0.0
3.544ProAsn: 3.544 ± 0.0
1.063ProPro: 1.063 ± 0.0
2.481ProGln: 2.481 ± 0.0
1.772ProArg: 1.772 ± 0.0
5.67ProSer: 5.67 ± 0.0
3.898ProThr: 3.898 ± 0.0
2.835ProVal: 2.835 ± 0.0
0.709ProTrp: 0.709 ± 0.0
1.772ProTyr: 1.772 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.544GlnAla: 3.544 ± 0.0
0.709GlnCys: 0.709 ± 0.0
2.126GlnAsp: 2.126 ± 0.0
2.126GlnGlu: 2.126 ± 0.0
1.063GlnPhe: 1.063 ± 0.0
1.772GlnGly: 1.772 ± 0.0
0.354GlnHis: 0.354 ± 0.0
1.772GlnIle: 1.772 ± 0.0
1.063GlnLys: 1.063 ± 0.0
2.126GlnLeu: 2.126 ± 0.0
2.126GlnMet: 2.126 ± 0.0
0.709GlnAsn: 0.709 ± 0.0
2.126GlnPro: 2.126 ± 0.0
0.354GlnGln: 0.354 ± 0.0
2.126GlnArg: 2.126 ± 0.0
2.835GlnSer: 2.835 ± 0.0
4.252GlnThr: 4.252 ± 0.0
2.835GlnVal: 2.835 ± 0.0
0.709GlnTrp: 0.709 ± 0.0
1.063GlnTyr: 1.063 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
4.607ArgAla: 4.607 ± 0.0
1.063ArgCys: 1.063 ± 0.0
3.544ArgAsp: 3.544 ± 0.0
3.544ArgGlu: 3.544 ± 0.0
1.417ArgPhe: 1.417 ± 0.0
1.063ArgGly: 1.063 ± 0.0
1.063ArgHis: 1.063 ± 0.0
3.898ArgIle: 3.898 ± 0.0
2.481ArgLys: 2.481 ± 0.0
4.607ArgLeu: 4.607 ± 0.0
1.772ArgMet: 1.772 ± 0.0
4.607ArgAsn: 4.607 ± 0.0
5.315ArgPro: 5.315 ± 0.0
2.126ArgGln: 2.126 ± 0.0
5.67ArgArg: 5.67 ± 0.0
4.961ArgSer: 4.961 ± 0.0
2.835ArgThr: 2.835 ± 0.0
4.607ArgVal: 4.607 ± 0.0
0.709ArgTrp: 0.709 ± 0.0
2.126ArgTyr: 2.126 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
7.442SerAla: 7.442 ± 0.0
1.063SerCys: 1.063 ± 0.0
3.544SerAsp: 3.544 ± 0.0
4.961SerGlu: 4.961 ± 0.0
2.126SerPhe: 2.126 ± 0.0
2.835SerGly: 2.835 ± 0.0
2.126SerHis: 2.126 ± 0.0
3.189SerIle: 3.189 ± 0.0
2.126SerLys: 2.126 ± 0.0
4.961SerLeu: 4.961 ± 0.0
1.063SerMet: 1.063 ± 0.0
2.481SerAsn: 2.481 ± 0.0
4.252SerPro: 4.252 ± 0.0
2.481SerGln: 2.481 ± 0.0
2.126SerArg: 2.126 ± 0.0
4.607SerSer: 4.607 ± 0.0
6.733SerThr: 6.733 ± 0.0
6.733SerVal: 6.733 ± 0.0
1.417SerTrp: 1.417 ± 0.0
3.544SerTyr: 3.544 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
6.733ThrAla: 6.733 ± 0.0
1.063ThrCys: 1.063 ± 0.0
6.733ThrAsp: 6.733 ± 0.0
3.544ThrGlu: 3.544 ± 0.0
2.481ThrPhe: 2.481 ± 0.0
3.544ThrGly: 3.544 ± 0.0
1.417ThrHis: 1.417 ± 0.0
6.024ThrIle: 6.024 ± 0.0
3.898ThrLys: 3.898 ± 0.0
5.67ThrLeu: 5.67 ± 0.0
2.835ThrMet: 2.835 ± 0.0
2.481ThrAsn: 2.481 ± 0.0
3.898ThrPro: 3.898 ± 0.0
4.252ThrGln: 4.252 ± 0.0
6.378ThrArg: 6.378 ± 0.0
4.607ThrSer: 4.607 ± 0.0
8.859ThrThr: 8.859 ± 0.0
6.024ThrVal: 6.024 ± 0.0
1.772ThrTrp: 1.772 ± 0.0
3.189ThrTyr: 3.189 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
6.733ValAla: 6.733 ± 0.0
2.126ValCys: 2.126 ± 0.0
4.607ValAsp: 4.607 ± 0.0
2.835ValGlu: 2.835 ± 0.0
3.189ValPhe: 3.189 ± 0.0
4.607ValGly: 4.607 ± 0.0
1.417ValHis: 1.417 ± 0.0
2.481ValIle: 2.481 ± 0.0
2.835ValLys: 2.835 ± 0.0
8.15ValLeu: 8.15 ± 0.0
1.417ValMet: 1.417 ± 0.0
3.898ValAsn: 3.898 ± 0.0
6.378ValPro: 6.378 ± 0.0
2.481ValGln: 2.481 ± 0.0
4.607ValArg: 4.607 ± 0.0
3.898ValSer: 3.898 ± 0.0
4.961ValThr: 4.961 ± 0.0
4.252ValVal: 4.252 ± 0.0
1.417ValTrp: 1.417 ± 0.0
1.772ValTyr: 1.772 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
1.063TrpAla: 1.063 ± 0.0
0.0TrpCys: 0.0 ± 0.0
1.063TrpAsp: 1.063 ± 0.0
1.772TrpGlu: 1.772 ± 0.0
0.709TrpPhe: 0.709 ± 0.0
0.709TrpGly: 0.709 ± 0.0
0.0TrpHis: 0.0 ± 0.0
1.063TrpIle: 1.063 ± 0.0
0.354TrpLys: 0.354 ± 0.0
1.417TrpLeu: 1.417 ± 0.0
0.709TrpMet: 0.709 ± 0.0
0.354TrpAsn: 0.354 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.709TrpGln: 0.709 ± 0.0
2.126TrpArg: 2.126 ± 0.0
1.063TrpSer: 1.063 ± 0.0
1.772TrpThr: 1.772 ± 0.0
0.0TrpVal: 0.0 ± 0.0
0.709TrpTrp: 0.709 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.835TyrAla: 2.835 ± 0.0
0.0TyrCys: 0.0 ± 0.0
2.481TyrAsp: 2.481 ± 0.0
2.126TyrGlu: 2.126 ± 0.0
0.354TyrPhe: 0.354 ± 0.0
3.898TyrGly: 3.898 ± 0.0
1.063TyrHis: 1.063 ± 0.0
1.772TyrIle: 1.772 ± 0.0
1.772TyrLys: 1.772 ± 0.0
2.835TyrLeu: 2.835 ± 0.0
0.354TyrMet: 0.354 ± 0.0
2.126TyrAsn: 2.126 ± 0.0
1.772TyrPro: 1.772 ± 0.0
1.772TyrGln: 1.772 ± 0.0
1.772TyrArg: 1.772 ± 0.0
1.772TyrSer: 1.772 ± 0.0
3.544TyrThr: 3.544 ± 0.0
2.481TyrVal: 2.481 ± 0.0
0.354TyrTrp: 0.354 ± 0.0
1.063TyrTyr: 1.063 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2823 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski