Streptococcus satellite phage Javan547

Taxonomy: Viruses; unclassified bacterial viruses

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 16 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D5ZSN0|A0A4D5ZSN0_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan547 OX=2558741 GN=JavanS547_0010 PE=4 SV=1
MM1 pKa = 7.82AKK3 pKa = 7.93TTEE6 pKa = 4.0QTKK9 pKa = 8.33TVQLTVEE16 pKa = 4.37EE17 pKa = 4.49LQSLGCRR24 pKa = 11.84LSNILKK30 pKa = 8.24TIKK33 pKa = 9.45MDD35 pKa = 3.49QVAQAGVSLAKK46 pKa = 10.69DD47 pKa = 3.09RR48 pKa = 11.84DD49 pKa = 4.19SFTFTHH55 pKa = 7.29LATSYY60 pKa = 10.64LSSSYY65 pKa = 10.78EE66 pKa = 3.85VFEE69 pKa = 4.45MIIAEE74 pKa = 4.41LDD76 pKa = 4.34DD77 pKa = 4.12IASQLLEE84 pKa = 4.78CDD86 pKa = 3.55DD87 pKa = 4.73AEE89 pKa = 4.16EE90 pKa = 5.29LEE92 pKa = 4.39GFRR95 pKa = 11.84NGRR98 pKa = 3.5

Molecular weight: 10.94 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D5ZVG0|A0A4D5ZVG0_9VIRU Uncharacterized protein OS=Streptococcus satellite phage Javan547 OX=2558741 GN=JavanS547_0011 PE=4 SV=1
MM1 pKa = 7.63KK2 pKa = 10.11IVEE5 pKa = 4.32VKK7 pKa = 10.58KK8 pKa = 10.59KK9 pKa = 10.48DD10 pKa = 3.25GSKK13 pKa = 10.06VYY15 pKa = 10.08RR16 pKa = 11.84ASVYY20 pKa = 10.76LGVDD24 pKa = 2.9QVTGKK29 pKa = 10.15KK30 pKa = 10.12VKK32 pKa = 9.8TSITGRR38 pKa = 11.84TRR40 pKa = 11.84KK41 pKa = 8.72EE42 pKa = 4.07VKK44 pKa = 10.28SKK46 pKa = 10.57AQHH49 pKa = 5.58AQFDD53 pKa = 4.38FKK55 pKa = 11.59LNGSTVHH62 pKa = 6.3KK63 pKa = 10.23AVRR66 pKa = 11.84VKK68 pKa = 10.68NYY70 pKa = 10.33QEE72 pKa = 5.57LADD75 pKa = 4.72LWLEE79 pKa = 4.3SYY81 pKa = 10.85QLTVKK86 pKa = 9.85PQTFIATKK94 pKa = 10.17RR95 pKa = 11.84MVYY98 pKa = 10.06SHH100 pKa = 7.65LIPVFGKK107 pKa = 9.72MKK109 pKa = 10.13LDD111 pKa = 3.56KK112 pKa = 10.75LAASYY117 pKa = 10.54IQGFVNDD124 pKa = 4.64LSSHH128 pKa = 5.97LVHH131 pKa = 6.81FGVVHH136 pKa = 6.77SINSRR141 pKa = 11.84ILKK144 pKa = 10.27YY145 pKa = 10.45GVSLQLIPFNPARR158 pKa = 11.84DD159 pKa = 3.52IILPRR164 pKa = 11.84KK165 pKa = 8.8PKK167 pKa = 10.42RR168 pKa = 11.84EE169 pKa = 3.8NKK171 pKa = 9.61SIKK174 pKa = 10.17FISPEE179 pKa = 3.9DD180 pKa = 3.73LKK182 pKa = 10.59TLLDD186 pKa = 3.9YY187 pKa = 10.65MEE189 pKa = 4.9KK190 pKa = 10.63LAFKK194 pKa = 10.06KK195 pKa = 10.39YY196 pKa = 10.76SYY198 pKa = 10.84FFDD201 pKa = 3.47YY202 pKa = 10.38MLYY205 pKa = 10.51SVLLATGCRR214 pKa = 11.84FGEE217 pKa = 4.29AVALEE222 pKa = 4.2WSDD225 pKa = 3.65IDD227 pKa = 5.39LEE229 pKa = 4.22NATISISKK237 pKa = 10.02NYY239 pKa = 9.17NRR241 pKa = 11.84LVDD244 pKa = 4.31LVGPPKK250 pKa = 10.52SKK252 pKa = 10.78AGVRR256 pKa = 11.84VISIDD261 pKa = 3.3RR262 pKa = 11.84KK263 pKa = 7.22TVNMLKK269 pKa = 10.23LYY271 pKa = 10.65KK272 pKa = 10.14NRR274 pKa = 11.84QRR276 pKa = 11.84QLFIEE281 pKa = 4.88DD282 pKa = 3.56GARR285 pKa = 11.84APSVVFATPTKK296 pKa = 10.09KK297 pKa = 9.84YY298 pKa = 10.66QNMATRR304 pKa = 11.84QDD306 pKa = 3.65SLDD309 pKa = 3.75RR310 pKa = 11.84RR311 pKa = 11.84CKK313 pKa = 9.49EE314 pKa = 3.43AGIPRR319 pKa = 11.84FTFHH323 pKa = 7.74AFRR326 pKa = 11.84HH327 pKa = 4.69THH329 pKa = 6.92ASLLLNAGISYY340 pKa = 10.68KK341 pKa = 10.23EE342 pKa = 3.61LQYY345 pKa = 11.49RR346 pKa = 11.84LGHH349 pKa = 6.19ATLAMTMDD357 pKa = 4.24IYY359 pKa = 11.79SHH361 pKa = 6.95LSKK364 pKa = 10.92DD365 pKa = 3.51KK366 pKa = 10.41EE367 pKa = 4.25KK368 pKa = 10.93EE369 pKa = 3.85AVSYY373 pKa = 9.52YY374 pKa = 10.59EE375 pKa = 4.03KK376 pKa = 10.7AINGLL381 pKa = 3.67

Molecular weight: 43.61 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

16

0

16

2795

44

491

174.7

19.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.691 ± 0.344

0.644 ± 0.136

4.973 ± 0.369

8.193 ± 0.782

4.258 ± 0.305

4.973 ± 0.378

2.039 ± 0.269

6.44 ± 0.54

9.088 ± 0.719

9.767 ± 0.445

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.397 ± 0.262

5.188 ± 0.585

3.864 ± 0.581

4.365 ± 0.461

4.723 ± 0.464

6.047 ± 0.668

6.297 ± 0.495

5.295 ± 0.544

0.751 ± 0.184

4.007 ± 0.319
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski