Aspergillus candidus

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus

Average proteome isoelectric point is 6.51

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 9639 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2I2F865|A0A2I2F865_9EURO Zn(2)-C6 fungal-type domain-containing protein OS=Aspergillus candidus OX=41067 GN=BDW47DRAFT_132620 PE=4 SV=1
MM1 pKa = 6.92VRR3 pKa = 11.84QAAFVIPALFLQAAVARR20 pKa = 11.84PAGAEE25 pKa = 4.03LPPPGYY31 pKa = 9.24EE32 pKa = 3.93VNVVEE37 pKa = 4.01VCYY40 pKa = 9.92PVVIPGDD47 pKa = 3.87DD48 pKa = 3.55NRR50 pKa = 11.84GLGSGGAHH58 pKa = 6.56PPGSLEE64 pKa = 3.9IGQGPSNGTSPGVHH78 pKa = 6.25GGGNGGNGGNGSNGGTGLGALGGGNGGNGGKK109 pKa = 9.9NGGSTGSHH117 pKa = 6.31GGDD120 pKa = 2.67SGANNGANTSGPRR133 pKa = 11.84GDD135 pKa = 3.96NGSTGGSTGGPGGDD149 pKa = 3.06NGSNVGGSTGGPGGSTGGSNGGSNGGSAGGSGGDD183 pKa = 3.22NGGNGGGSTGGPGGDD198 pKa = 3.1NGGNGGGGTGGPGGDD213 pKa = 3.19NGGNGGGSNTGGAGEE228 pKa = 4.61SSTGTSISQPTTNIIPLPSTSEE250 pKa = 3.53WCPPVTVTDD259 pKa = 4.41CPIITPSDD267 pKa = 3.94CPVVTDD273 pKa = 3.51VTTITITTAPPGSSGVPGLPTTDD296 pKa = 4.11CLTDD300 pKa = 3.24VSTITITIPGSSGLPVSPTDD320 pKa = 3.69CPTVTEE326 pKa = 4.56PGQTVTLPGQTITEE340 pKa = 4.52PGQTLTLPGQTITLPGQTITEE361 pKa = 4.47PGLTVTDD368 pKa = 4.45PGQTLTLPPSQVKK381 pKa = 9.33PP382 pKa = 3.62

Molecular weight: 35.15 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2I2FAT2|A0A2I2FAT2_9EURO Protein YIP OS=Aspergillus candidus OX=41067 GN=BDW47DRAFT_106210 PE=3 SV=1
MM1 pKa = 7.48LAASLATSPVTAPLPTVVPSAPPARR26 pKa = 11.84SATSAPRR33 pKa = 11.84LATSLGTAPTTRR45 pKa = 11.84PLPSNPPRR53 pKa = 11.84LVPPPPFLLLPLPSRR68 pKa = 11.84RR69 pKa = 11.84LPKK72 pKa = 10.47SPLLPRR78 pKa = 11.84LPLPLSHH85 pKa = 7.17KK86 pKa = 10.57KK87 pKa = 8.53STLL90 pKa = 3.35

Molecular weight: 9.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9639

0

9639

4627908

49

5484

480.1

53.07

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.622 ± 0.024

1.259 ± 0.01

5.835 ± 0.017

6.003 ± 0.023

3.702 ± 0.014

6.996 ± 0.025

2.519 ± 0.012

4.618 ± 0.019

4.401 ± 0.019

8.985 ± 0.024

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.184 ± 0.009

3.437 ± 0.013

6.434 ± 0.031

4.006 ± 0.018

6.405 ± 0.024

8.25 ± 0.026

5.889 ± 0.015

6.284 ± 0.02

1.44 ± 0.008

2.727 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski