Klebsiella phage ST899-OXA48phi17.1

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; unclassified Myoviridae

Average proteome isoelectric point is 6.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 51 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A482JAC8|A0A482JAC8_9CAUD Uncharacterized protein OS=Klebsiella phage ST899-OXA48phi17.1 OX=2555917 PE=4 SV=1
MM1 pKa = 7.39NNVDD5 pKa = 3.07WTIYY9 pKa = 8.99AQYY12 pKa = 11.17VNSTSLRR19 pKa = 11.84SLIDD23 pKa = 3.21TFNASVAPEE32 pKa = 3.82DD33 pKa = 4.41WIDD36 pKa = 3.37TFYY39 pKa = 11.7DD40 pKa = 3.51LVFNIEE46 pKa = 3.93TCGDD50 pKa = 3.75YY51 pKa = 11.65GLMCWGKK58 pKa = 9.3IVDD61 pKa = 3.96VEE63 pKa = 4.28RR64 pKa = 11.84LLTVTPSQQFLGFGEE79 pKa = 4.37ATSTPAEE86 pKa = 4.21LTDD89 pKa = 3.85PQPFNQAPFYY99 pKa = 10.9TGVQDD104 pKa = 3.58TNTVVLTNDD113 pKa = 3.87AYY115 pKa = 11.01RR116 pKa = 11.84KK117 pKa = 10.28LIMCKK122 pKa = 10.34AMANISDD129 pKa = 3.97CTVPVMNRR137 pKa = 11.84MLMYY141 pKa = 10.06MFGASGRR148 pKa = 11.84AYY150 pKa = 10.78VRR152 pKa = 11.84DD153 pKa = 4.24DD154 pKa = 3.84GNHH157 pKa = 4.05VMSYY161 pKa = 10.26VFEE164 pKa = 4.34FQLSDD169 pKa = 3.61SEE171 pKa = 4.3LAIVQSSGALPSPPGVKK188 pKa = 10.25VNIVQEE194 pKa = 4.31VV195 pKa = 3.07

Molecular weight: 21.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A482J721|A0A482J721_9CAUD Uncharacterized protein OS=Klebsiella phage ST899-OXA48phi17.1 OX=2555917 PE=4 SV=1
MM1 pKa = 7.16SRR3 pKa = 11.84DD4 pKa = 3.47VIEE7 pKa = 5.67RR8 pKa = 11.84ILDD11 pKa = 3.47RR12 pKa = 11.84WQKK15 pKa = 10.8LRR17 pKa = 11.84LCRR20 pKa = 11.84HH21 pKa = 6.55RR22 pKa = 11.84GTVLVDD28 pKa = 2.9YY29 pKa = 10.57RR30 pKa = 11.84ILKK33 pKa = 9.69NFVRR37 pKa = 11.84IYY39 pKa = 9.67QASGEE44 pKa = 4.28KK45 pKa = 10.31AA46 pKa = 3.03

Molecular weight: 5.6 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

51

0

51

10778

39

872

211.3

23.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.584 ± 0.583

0.956 ± 0.133

5.771 ± 0.283

5.4 ± 0.362

3.795 ± 0.197

7.896 ± 0.517

1.475 ± 0.144

6.031 ± 0.295

5.372 ± 0.33

7.831 ± 0.275

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.821 ± 0.178

4.676 ± 0.208

3.915 ± 0.241

4.008 ± 0.211

4.992 ± 0.387

7.487 ± 0.341

6.253 ± 0.359

6.81 ± 0.21

1.512 ± 0.146

3.414 ± 0.229
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski