Bacillus anthracis
Average proteome isoelectric point is 6.58
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 5493 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A6H3A920|A0A6H3A920_BACAN Cation-transporting ATPase E1-E2 family OS=Bacillus anthracis OX=1392 GN=GBAA_0405 PE=4 SV=1
MM1 pKa = 8.17 DD2 pKa = 3.89 KK3 pKa = 10.79 QKK5 pKa = 11.1 AIDD8 pKa = 4.26 LLNSLEE14 pKa = 4.19 IYY16 pKa = 10.5 DD17 pKa = 4.03 YY18 pKa = 11.58 DD19 pKa = 4.87 ADD21 pKa = 4.94 GEE23 pKa = 4.25 ILYY26 pKa = 10.39 YY27 pKa = 11.16 ALVKK31 pKa = 10.85 LNEE34 pKa = 4.33 DD35 pKa = 3.45 SKK37 pKa = 11.73 KK38 pKa = 10.78 VIEE41 pKa = 4.26 SLLPEE46 pKa = 3.79 GVNFNEE52 pKa = 4.21 GLDD55 pKa = 3.92 DD56 pKa = 4.37 KK57 pKa = 12.0 GEE59 pKa = 4.23 LFDD62 pKa = 3.69 ITLFCWEE69 pKa = 3.92 YY70 pKa = 11.66 AEE72 pKa = 4.72 WFNGDD77 pKa = 2.73 QFMAEE82 pKa = 4.27 EE83 pKa = 4.3 PKK85 pKa = 10.59 EE86 pKa = 4.34 VYY88 pKa = 10.37 CEE90 pKa = 4.3 SNN92 pKa = 2.86
Molecular weight: 10.73 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.762
IPC2_protein 3.859
IPC_protein 3.795
Toseland 3.605
ProMoST 3.948
Dawson 3.77
Bjellqvist 3.923
Wikipedia 3.681
Rodwell 3.63
Grimsley 3.516
Solomon 3.757
Lehninger 3.706
Nozaki 3.897
DTASelect 4.05
Thurlkill 3.656
EMBOSS 3.694
Sillero 3.91
Patrickios 1.863
IPC_peptide 3.757
IPC2_peptide 3.897
IPC2.peptide.svr19 3.828
Protein with the highest isoelectric point:
>sp|Q81KZ0|PFKA_BACAN ATP-dependent 6-phosphofructokinase OS=Bacillus anthracis OX=1392 GN=pfkA PE=3 SV=1
MM1 pKa = 7.35 KK2 pKa = 9.42 RR3 pKa = 11.84 TYY5 pKa = 10.34 QPNKK9 pKa = 8.21 RR10 pKa = 11.84 KK11 pKa = 9.62 RR12 pKa = 11.84 SKK14 pKa = 9.59 VHH16 pKa = 5.83 GFRR19 pKa = 11.84 SRR21 pKa = 11.84 MSTANGRR28 pKa = 11.84 KK29 pKa = 8.81 VLAARR34 pKa = 11.84 RR35 pKa = 11.84 RR36 pKa = 11.84 KK37 pKa = 8.81 GRR39 pKa = 11.84 KK40 pKa = 8.75 VLSAA44 pKa = 4.05
Molecular weight: 5.17 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.414
IPC2_protein 11.096
IPC_protein 12.457
Toseland 12.618
ProMoST 13.1
Dawson 12.618
Bjellqvist 12.603
Wikipedia 13.086
Rodwell 12.384
Grimsley 12.661
Solomon 13.1
Lehninger 13.013
Nozaki 12.618
DTASelect 12.603
Thurlkill 12.618
EMBOSS 13.115
Sillero 12.618
Patrickios 12.106
IPC_peptide 13.115
IPC2_peptide 12.091
IPC2.peptide.svr19 9.021
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5490
3
5493
1439306
28
5017
262.0
29.54
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
6.695 ± 0.032
0.848 ± 0.011
4.658 ± 0.024
7.568 ± 0.05
4.69 ± 0.031
6.654 ± 0.035
2.122 ± 0.019
8.073 ± 0.041
7.465 ± 0.044
9.505 ± 0.044
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.865 ± 0.017
4.621 ± 0.037
3.379 ± 0.025
3.701 ± 0.022
3.764 ± 0.028
5.794 ± 0.026
5.574 ± 0.047
7.252 ± 0.038
1.026 ± 0.013
3.747 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here