Cercopithecine herpesvirus 1 (CeHV-1) (Simian herpes B virus)

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Simplexvirus

Average proteome isoelectric point is 7.03

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 72 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q7T5F0|Q7T5F0_CHV1 Nuclear protein UL3 OS=Cercopithecine herpesvirus 1 OX=10325 GN=UL3 PE=3 SV=1
MM1 pKa = 7.42AASPATIAYY10 pKa = 8.73SLHH13 pKa = 5.22GTATSSACVLPDD25 pKa = 3.52AEE27 pKa = 4.23QVVCAFDD34 pKa = 3.55GGTRR38 pKa = 11.84AIASRR43 pKa = 11.84GCLRR47 pKa = 11.84QDD49 pKa = 3.37TLSRR53 pKa = 11.84GAVVVRR59 pKa = 11.84QTPVGLLVMVDD70 pKa = 3.68CRR72 pKa = 11.84TDD74 pKa = 3.82FCAYY78 pKa = 10.07RR79 pKa = 11.84FVGRR83 pKa = 11.84SGRR86 pKa = 11.84QRR88 pKa = 11.84LEE90 pKa = 3.88RR91 pKa = 11.84WWDD94 pKa = 3.65TNLCAYY100 pKa = 9.57PFDD103 pKa = 3.81SWVSSTRR110 pKa = 11.84GEE112 pKa = 4.38SVRR115 pKa = 11.84SPTAGIVTVVWGEE128 pKa = 3.65DD129 pKa = 3.21SIYY132 pKa = 9.94ITVTVYY138 pKa = 10.47GSPPGGEE145 pKa = 4.26AEE147 pKa = 4.88APLPDD152 pKa = 4.96PSSPPLDD159 pKa = 3.93APGTPSPPAVSPASAEE175 pKa = 3.85AGAAADD181 pKa = 4.17LLVEE185 pKa = 4.19VMKK188 pKa = 10.32EE189 pKa = 3.84IQLSPTLGFGQHH201 pKa = 5.73EE202 pKa = 4.35PP203 pKa = 3.6

Molecular weight: 21.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q805Y1|Q805Y1_CHV1 Alpha trans-inducing protein OS=Cercopithecine herpesvirus 1 OX=10325 GN=UL48 PE=3 SV=1
MM1 pKa = 7.88ASRR4 pKa = 11.84RR5 pKa = 11.84LPKK8 pKa = 9.91PKK10 pKa = 9.79PHH12 pKa = 6.26GTDD15 pKa = 2.94EE16 pKa = 4.34VEE18 pKa = 3.78ADD20 pKa = 3.42VYY22 pKa = 11.58YY23 pKa = 11.11DD24 pKa = 5.21FITPDD29 pKa = 3.18ASPARR34 pKa = 11.84VSFEE38 pKa = 4.11EE39 pKa = 4.06PGARR43 pKa = 11.84ARR45 pKa = 11.84APRR48 pKa = 11.84SQARR52 pKa = 11.84GRR54 pKa = 11.84SQAGRR59 pKa = 11.84YY60 pKa = 6.77GHH62 pKa = 7.31HH63 pKa = 6.21YY64 pKa = 10.13QDD66 pKa = 3.84TARR69 pKa = 11.84VEE71 pKa = 4.18YY72 pKa = 8.78PYY74 pKa = 10.25PAGSSSEE81 pKa = 4.27DD82 pKa = 3.48EE83 pKa = 4.62RR84 pKa = 11.84PADD87 pKa = 3.6PRR89 pKa = 11.84PSRR92 pKa = 11.84RR93 pKa = 11.84AHH95 pKa = 6.09AQPEE99 pKa = 4.39APGQSAPRR107 pKa = 11.84GARR110 pKa = 11.84GAAAARR116 pKa = 11.84GRR118 pKa = 11.84VRR120 pKa = 11.84AEE122 pKa = 3.88SPSPRR127 pKa = 11.84RR128 pKa = 11.84DD129 pKa = 3.46PDD131 pKa = 3.48PKK133 pKa = 10.36GASVPRR139 pKa = 11.84ARR141 pKa = 11.84KK142 pKa = 8.95SACATATATATTTAAAAGAAKK163 pKa = 10.28SQTAAAAKK171 pKa = 9.75KK172 pKa = 9.88LHH174 pKa = 6.59FSTAPTSPTAPWTPRR189 pKa = 11.84VAGFNKK195 pKa = 9.17RR196 pKa = 11.84TFCAAVGRR204 pKa = 11.84VAATHH209 pKa = 6.07ARR211 pKa = 11.84MAAAQLWDD219 pKa = 3.85LSHH222 pKa = 7.02PRR224 pKa = 11.84NDD226 pKa = 3.67EE227 pKa = 3.88EE228 pKa = 6.18LNDD231 pKa = 4.36LLGATNIRR239 pKa = 11.84IIVCEE244 pKa = 3.87GLNLVPRR251 pKa = 11.84ANEE254 pKa = 4.32LISPEE259 pKa = 4.17VAQDD263 pKa = 2.94ADD265 pKa = 3.53VGVRR269 pKa = 11.84GRR271 pKa = 11.84ATTARR276 pKa = 11.84PAGRR280 pKa = 11.84SASRR284 pKa = 11.84RR285 pKa = 11.84RR286 pKa = 11.84PPEE289 pKa = 3.4

Molecular weight: 30.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

72

0

72

38364

79

3288

532.8

57.08

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

15.376 ± 0.575

1.71 ± 0.116

5.255 ± 0.157

5.419 ± 0.158

3.316 ± 0.201

7.963 ± 0.194

2.294 ± 0.122

2.341 ± 0.149

1.282 ± 0.139

9.702 ± 0.233

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.431 ± 0.095

1.843 ± 0.165

9.17 ± 0.546

2.466 ± 0.118

9.405 ± 0.218

5.487 ± 0.171

5.099 ± 0.184

6.941 ± 0.217

1.116 ± 0.073

2.385 ± 0.149
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski