Pongo abelii (Sumatran orangutan) (Pongo pygmaeus abelii)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria;

Average proteome isoelectric point is 6.79

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 22970 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|H2NX31|H2NX31_PONAB Uncharacterized protein OS=Pongo abelii OX=9601 PE=3 SV=1
MM1 pKa = 7.64CPPVSMRR8 pKa = 11.84YY9 pKa = 8.57EE10 pKa = 4.14EE11 pKa = 4.76EE12 pKa = 4.15GMSYY16 pKa = 10.81LYY18 pKa = 10.63AFWMYY23 pKa = 10.71QLQHH27 pKa = 6.52GDD29 pKa = 3.28QLSICFTCFKK39 pKa = 10.87AAFLDD44 pKa = 4.78FKK46 pKa = 11.33DD47 pKa = 4.13LLEE50 pKa = 5.61SEE52 pKa = 5.11DD53 pKa = 3.77WEE55 pKa = 4.28EE56 pKa = 4.96DD57 pKa = 3.12NWDD60 pKa = 4.0PEE62 pKa = 4.56LMEE65 pKa = 4.29HH66 pKa = 6.39TEE68 pKa = 4.12AEE70 pKa = 4.19SDD72 pKa = 3.71QEE74 pKa = 4.4GSSGMEE80 pKa = 4.05LSWGQSPGQPVQEE93 pKa = 4.81GSEE96 pKa = 3.95AWGPGTPAAAPEE108 pKa = 4.27GSEE111 pKa = 4.81DD112 pKa = 4.46AGLDD116 pKa = 3.31PHH118 pKa = 7.12FVPTEE123 pKa = 4.26LGPQEE128 pKa = 4.62AVPLGLGHH136 pKa = 7.26EE137 pKa = 4.57DD138 pKa = 3.94ADD140 pKa = 4.04WTQGLPWRR148 pKa = 11.84FEE150 pKa = 3.93GLLTCSHH157 pKa = 6.89WPSFFPSS164 pKa = 3.08

Molecular weight: 18.37 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|H2NL65|H2NL65_PONAB Uncharacterized protein OS=Pongo abelii OX=9601 PE=4 SV=2
TT1 pKa = 7.54PSHH4 pKa = 6.31SLTRR8 pKa = 11.84VFPLPTVTLHH18 pKa = 5.99TPSHH22 pKa = 6.2SLTRR26 pKa = 11.84TPLPAVTLHH35 pKa = 6.09TPSHH39 pKa = 6.03SLTRR43 pKa = 11.84VFPLPAVTLHH53 pKa = 6.09TPSHH57 pKa = 6.09SLTRR61 pKa = 11.84TFPLPAVTLHH71 pKa = 6.06TPSHH75 pKa = 5.73SVTRR79 pKa = 11.84VFPLPTVTLHH89 pKa = 5.99TPSHH93 pKa = 6.2SLTRR97 pKa = 11.84TPLPAVTLHH106 pKa = 6.09TPSHH110 pKa = 6.03SLTRR114 pKa = 11.84VFPLPTVTLHH124 pKa = 5.99TPSHH128 pKa = 6.26SLTRR132 pKa = 11.84TPSPASLTRR141 pKa = 11.84TFPLPAVTLHH151 pKa = 6.09TPSHH155 pKa = 6.09SLTRR159 pKa = 11.84TFPLPAVTLHH169 pKa = 6.09TPSHH173 pKa = 6.09SLTRR177 pKa = 11.84TFPLPAVTLHH187 pKa = 6.09TPSHH191 pKa = 6.09SLTRR195 pKa = 11.84TFPLPAVTLHH205 pKa = 6.04TPSHH209 pKa = 6.23GLTRR213 pKa = 11.84TFPLPAVTLHH223 pKa = 6.04TPSHH227 pKa = 6.23GLTRR231 pKa = 11.84TFPLPAVTLQTPSHH245 pKa = 6.3GLTRR249 pKa = 11.84TFPLPTVTLHH259 pKa = 5.99TPSHH263 pKa = 6.2SLTRR267 pKa = 11.84TPLPAVTLHH276 pKa = 6.01TPSS279 pKa = 3.33

Molecular weight: 30.13 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

21992

978

22970

11531378

7

31962

502.0

55.97

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.955 ± 0.018

2.28 ± 0.015

4.77 ± 0.011

7.103 ± 0.022

3.684 ± 0.012

6.543 ± 0.025

2.638 ± 0.01

4.398 ± 0.016

5.808 ± 0.021

9.94 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.163 ± 0.008

3.619 ± 0.012

6.206 ± 0.025

4.759 ± 0.018

5.654 ± 0.016

8.264 ± 0.021

5.291 ± 0.016

6.0 ± 0.015

1.226 ± 0.006

2.673 ± 0.009
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski