Kwoniella dejecticola CBS 10117

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Kwoniella; Kwoniella dejecticola

Average proteome isoelectric point is 6.4

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8600 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1A5ZXR9|A0A1A5ZXR9_9TREE Uncharacterized protein OS=Kwoniella dejecticola CBS 10117 OX=1296121 GN=I303_07364 PE=4 SV=1
MM1 pKa = 7.72KK2 pKa = 10.21PRR4 pKa = 11.84DD5 pKa = 3.91SPVADD10 pKa = 3.61DD11 pKa = 3.68TFGGIEE17 pKa = 4.11VFDD20 pKa = 4.14AAGDD24 pKa = 3.83SMGYY28 pKa = 9.39ISKK31 pKa = 10.35NLDD34 pKa = 3.06EE35 pKa = 5.18GGYY38 pKa = 9.15TITTDD43 pKa = 3.09PTQAVSISFTQDD55 pKa = 2.08GSNPFSITISSNDD68 pKa = 3.25RR69 pKa = 11.84QAGYY73 pKa = 9.06PYY75 pKa = 10.86LGATLNTGSDD85 pKa = 3.44MGVSSAAFANLGGISHH101 pKa = 7.65IISGPSEE108 pKa = 4.11SDD110 pKa = 3.12DD111 pKa = 3.33TGEE114 pKa = 4.2SNTRR118 pKa = 11.84QLYY121 pKa = 10.37AGSEE125 pKa = 4.25TAIFLYY131 pKa = 10.87NADD134 pKa = 3.73TNAITGQWTNTDD146 pKa = 3.1NTKK149 pKa = 10.39VDD151 pKa = 3.84TIFYY155 pKa = 9.33FGPKK159 pKa = 9.64DD160 pKa = 3.67SYY162 pKa = 10.83SLGMIAPEE170 pKa = 4.73NYY172 pKa = 9.91DD173 pKa = 2.97QFAIDD178 pKa = 4.81FPEE181 pKa = 4.48DD182 pKa = 3.49QQKK185 pKa = 7.81VTFKK189 pKa = 10.65YY190 pKa = 10.96VSIDD194 pKa = 3.35PTPGVV199 pKa = 3.54

Molecular weight: 21.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1A5ZY65|A0A1A5ZY65_9TREE Multidrug transporter OS=Kwoniella dejecticola CBS 10117 OX=1296121 GN=I303_07516 PE=4 SV=1
MM1 pKa = 7.77SDD3 pKa = 2.61SGYY6 pKa = 10.87QVMALSPEE14 pKa = 4.36TSPQTPNITPSPPLRR29 pKa = 11.84QLSMSVPLALSADD42 pKa = 3.76GSSAIHH48 pKa = 6.8ASPVPPPRR56 pKa = 11.84DD57 pKa = 3.07IRR59 pKa = 11.84ALLSHH64 pKa = 6.89SPPLTPRR71 pKa = 11.84SCKK74 pKa = 10.22SSSTSPDD81 pKa = 3.04LKK83 pKa = 11.09KK84 pKa = 10.46LDD86 pKa = 3.88KK87 pKa = 10.81RR88 pKa = 11.84STASPSNFSRR98 pKa = 11.84NLPPLTRR105 pKa = 11.84TPPILPRR112 pKa = 11.84PPIGLSLAGPSGNGRR127 pKa = 11.84GTGIGLDD134 pKa = 3.66AFRR137 pKa = 11.84LGSPPKK143 pKa = 10.0QHH145 pKa = 6.51PQPGTATSHH154 pKa = 5.14HH155 pKa = 6.17HH156 pKa = 5.96TRR158 pKa = 11.84SFWVPSSTRR167 pKa = 11.84NDD169 pKa = 2.98QRR171 pKa = 11.84SQHH174 pKa = 5.37QRR176 pKa = 11.84LASLPSIHH184 pKa = 6.57TGHH187 pKa = 6.97RR188 pKa = 11.84EE189 pKa = 3.6KK190 pKa = 10.24TVYY193 pKa = 8.37RR194 pKa = 11.84TPVCIASQRR203 pKa = 11.84SFPMSTLTPVTQGEE217 pKa = 4.18ISSTISGRR225 pKa = 11.84EE226 pKa = 3.8SAYY229 pKa = 10.18QPPPHH234 pKa = 6.84HH235 pKa = 6.75RR236 pKa = 11.84HH237 pKa = 5.08QSLSYY242 pKa = 10.45SSHH245 pKa = 5.94TPLFQDD251 pKa = 3.31EE252 pKa = 4.66PVTHH256 pKa = 6.86RR257 pKa = 11.84RR258 pKa = 11.84HH259 pKa = 6.11PSSGDD264 pKa = 3.14AVIRR268 pKa = 11.84FASHH272 pKa = 6.81PLHH275 pKa = 6.45RR276 pKa = 11.84PAWAAPPPPPAHH288 pKa = 7.02AISIPGRR295 pKa = 11.84TQTMARR301 pKa = 11.84PRR303 pKa = 11.84LQIHH307 pKa = 7.12PYY309 pKa = 9.78APPRR313 pKa = 11.84MDD315 pKa = 3.05PRR317 pKa = 11.84YY318 pKa = 9.78YY319 pKa = 10.5SAGGLGMQTHH329 pKa = 5.96THH331 pKa = 6.98PGLAHH336 pKa = 6.78GGHH339 pKa = 6.36ILGYY343 pKa = 9.61GRR345 pKa = 11.84EE346 pKa = 4.13IVFTSPSSGISPGSFKK362 pKa = 10.93APRR365 pKa = 11.84KK366 pKa = 9.75RR367 pKa = 11.84ADD369 pKa = 3.57DD370 pKa = 3.7SQLAILNDD378 pKa = 3.72VFEE381 pKa = 4.43KK382 pKa = 9.93TAYY385 pKa = 9.72PSTDD389 pKa = 3.02EE390 pKa = 4.2RR391 pKa = 11.84DD392 pKa = 3.29EE393 pKa = 4.18LARR396 pKa = 11.84KK397 pKa = 9.91LGMTSRR403 pKa = 11.84SVQIWFQNRR412 pKa = 11.84RR413 pKa = 11.84RR414 pKa = 11.84AVKK417 pKa = 10.22VDD419 pKa = 3.18AQSAVQRR426 pKa = 11.84AEE428 pKa = 4.31AEE430 pKa = 3.88VDD432 pKa = 3.45TQLMIRR438 pKa = 11.84GPAPNIPRR446 pKa = 11.84PYY448 pKa = 9.22PVHH451 pKa = 5.37TRR453 pKa = 11.84HH454 pKa = 6.39RR455 pKa = 11.84SEE457 pKa = 4.16SQEE460 pKa = 4.03EE461 pKa = 4.71VPLQPIVSAIDD472 pKa = 3.56LSKK475 pKa = 10.99EE476 pKa = 3.69RR477 pKa = 11.84VFALFPTTRR486 pKa = 11.84PPLVASQSDD495 pKa = 3.66MVMVKK500 pKa = 10.28SEE502 pKa = 3.89VMTPP506 pKa = 3.18

Molecular weight: 55.25 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8600

0

8600

4400537

44

5001

511.7

56.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.009 ± 0.026

0.968 ± 0.008

5.651 ± 0.017

6.294 ± 0.025

3.301 ± 0.015

7.174 ± 0.025

2.359 ± 0.011

5.097 ± 0.018

5.164 ± 0.026

8.655 ± 0.029

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.034 ± 0.009

3.87 ± 0.015

6.529 ± 0.03

4.029 ± 0.023

5.731 ± 0.024

9.512 ± 0.035

6.088 ± 0.018

5.601 ± 0.019

1.345 ± 0.008

2.59 ± 0.012
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski