Bacillus aerolatus
Average proteome isoelectric point is 6.29
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3659 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A6I1FPK2|A0A6I1FPK2_9BACI Class II aldolase/adducin family protein OS=Bacillus aerolatus OX=2653354 GN=F9802_11530 PE=4 SV=1
MM1 pKa = 7.62 QSQNLQGAQEE11 pKa = 4.14 LLCINAEE18 pKa = 4.12 KK19 pKa = 10.78 VYY21 pKa = 10.98 DD22 pKa = 3.76 WVILQNTVNQNVLAGALGLPAGFNPCDD49 pKa = 3.53 PSVTNLTTRR58 pKa = 11.84 CFLVDD63 pKa = 3.79 EE64 pKa = 5.73 DD65 pKa = 5.11 GDD67 pKa = 4.13 PLPVNAEE74 pKa = 4.08 VEE76 pKa = 4.22 VEE78 pKa = 4.2 EE79 pKa = 4.48 IEE81 pKa = 4.18 EE82 pKa = 4.37 RR83 pKa = 11.84 EE84 pKa = 4.1 DD85 pKa = 3.19 RR86 pKa = 11.84 TFVIDD91 pKa = 3.75 GALVTLQRR99 pKa = 11.84 VTFLKK104 pKa = 9.46 PLCVRR109 pKa = 11.84 VEE111 pKa = 3.88 ISGVAGTTPFVGVTDD126 pKa = 5.1 PIGIEE131 pKa = 3.72 IPEE134 pKa = 4.45 SVFLCAPEE142 pKa = 4.13 GTRR145 pKa = 11.84 LVVRR149 pKa = 11.84 LTDD152 pKa = 3.12 VDD154 pKa = 3.68 CSVRR158 pKa = 11.84 INCTGTDD165 pKa = 3.82 FTSIDD170 pKa = 3.26 IALNLCQSIQTVADD184 pKa = 3.43 VTLEE188 pKa = 4.07 LEE190 pKa = 4.58 ADD192 pKa = 3.47 FCEE195 pKa = 4.52 PRR197 pKa = 11.84 DD198 pKa = 3.94 ILIEE202 pKa = 3.92 QCPAPVIPPQCPVLFPGIPGEE223 pKa = 4.12
Molecular weight: 24.14 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.758
IPC2_protein 3.872
IPC_protein 3.834
Toseland 3.63
ProMoST 3.948
Dawson 3.795
Bjellqvist 3.986
Wikipedia 3.694
Rodwell 3.656
Grimsley 3.541
Solomon 3.795
Lehninger 3.745
Nozaki 3.91
DTASelect 4.088
Thurlkill 3.668
EMBOSS 3.719
Sillero 3.948
Patrickios 1.863
IPC_peptide 3.795
IPC2_peptide 3.923
IPC2.peptide.svr19 3.855
Protein with the highest isoelectric point:
>tr|A0A6I1FN28|A0A6I1FN28_9BACI ATP-binding cassette domain-containing protein OS=Bacillus aerolatus OX=2653354 GN=F9802_00505 PE=4 SV=1
MM1 pKa = 7.35 KK2 pKa = 9.42 RR3 pKa = 11.84 TYY5 pKa = 10.34 QPNKK9 pKa = 8.21 RR10 pKa = 11.84 KK11 pKa = 9.62 RR12 pKa = 11.84 SKK14 pKa = 9.59 VHH16 pKa = 5.83 GFRR19 pKa = 11.84 SRR21 pKa = 11.84 MSSKK25 pKa = 10.02 NGRR28 pKa = 11.84 RR29 pKa = 11.84 ILARR33 pKa = 11.84 RR34 pKa = 11.84 RR35 pKa = 11.84 AKK37 pKa = 9.95 GRR39 pKa = 11.84 KK40 pKa = 8.67 VLSAA44 pKa = 4.05
Molecular weight: 5.26 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.433
IPC2_protein 11.125
IPC_protein 12.501
Toseland 12.661
ProMoST 13.159
Dawson 12.661
Bjellqvist 12.661
Wikipedia 13.144
Rodwell 12.398
Grimsley 12.705
Solomon 13.159
Lehninger 13.056
Nozaki 12.661
DTASelect 12.661
Thurlkill 12.661
EMBOSS 13.159
Sillero 12.661
Patrickios 12.135
IPC_peptide 13.159
IPC2_peptide 12.149
IPC2.peptide.svr19 9.06
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3659
0
3659
1091206
25
1529
298.2
33.3
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.972 ± 0.045
0.735 ± 0.013
4.794 ± 0.03
7.779 ± 0.055
4.544 ± 0.034
7.135 ± 0.04
2.079 ± 0.019
7.406 ± 0.039
6.849 ± 0.043
9.761 ± 0.045
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.826 ± 0.02
3.98 ± 0.025
3.76 ± 0.023
3.723 ± 0.028
4.138 ± 0.031
5.891 ± 0.026
5.295 ± 0.027
7.102 ± 0.032
0.999 ± 0.016
3.232 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here