Rachicladosporium antarcticum

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; dothideomyceta; Dothideomycetes; Dothideomycetidae; Cladosporiales; Cladosporiaceae; Rachicladosporium

Average proteome isoelectric point is 6.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 18598 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1V8SNQ6|A0A1V8SNQ6_9PEZI PX domain-containing protein OS=Rachicladosporium antarcticum OX=1507870 GN=B0A48_13872 PE=4 SV=1
MM1 pKa = 7.81ASPSTILTALLAATTTTSPLPAQTFGPQTVNLVSRR36 pKa = 11.84LCADD40 pKa = 3.22QSTSCSDD47 pKa = 3.24TTYY50 pKa = 10.86LAWLNTPFSLNITTSQLSLSSAQNVDD76 pKa = 2.8IDD78 pKa = 4.3LVNCEE83 pKa = 4.09VFFTGGDD90 pKa = 3.36AGPLLTADD98 pKa = 3.89TPVTLSSGLVDD109 pKa = 3.99IGNVTCSVSDD119 pKa = 3.38EE120 pKa = 4.79GKK122 pKa = 10.56GQDD125 pKa = 2.92QAGQIRR131 pKa = 11.84PGDD134 pKa = 3.62NATTTWVHH142 pKa = 6.14GGDD145 pKa = 4.89AIPVTTTTATGAVPTITGWGGAVVDD170 pKa = 4.92GGNEE174 pKa = 3.86TTATGSTPPSTTTYY188 pKa = 9.81TGGASGLEE196 pKa = 4.28VARR199 pKa = 11.84LLAAIAAVVGGWVSLLL215 pKa = 3.61

Molecular weight: 21.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1V8T4W8|A0A1V8T4W8_9PEZI 60S acidic ribosomal protein P2 OS=Rachicladosporium antarcticum OX=1507870 GN=B0A48_08948 PE=3 SV=1
MM1 pKa = 7.29NGDD4 pKa = 3.64SGKK7 pKa = 10.74LPLIDD12 pKa = 4.36IGDD15 pKa = 3.82EE16 pKa = 3.88ARR18 pKa = 11.84VCRR21 pKa = 11.84RR22 pKa = 11.84ANAARR27 pKa = 11.84PTDD30 pKa = 3.6NPARR34 pKa = 11.84TLLKK38 pKa = 9.92EE39 pKa = 3.96AYY41 pKa = 8.96KK42 pKa = 11.05AEE44 pKa = 4.01LAEE47 pKa = 4.52LGIDD51 pKa = 3.58PGQDD55 pKa = 2.3RR56 pKa = 11.84VIFDD60 pKa = 4.34CLWNIAHH67 pKa = 6.25VVTEE71 pKa = 4.34KK72 pKa = 10.08WRR74 pKa = 11.84STGAVDD80 pKa = 4.35FLEE83 pKa = 5.05ALAQEE88 pKa = 4.49FDD90 pKa = 3.17KK91 pKa = 11.4HH92 pKa = 6.41GITIVEE98 pKa = 4.29HH99 pKa = 7.45DD100 pKa = 4.6DD101 pKa = 4.01DD102 pKa = 4.2GTEE105 pKa = 4.0ITHH108 pKa = 6.5EE109 pKa = 4.31APVQQVVSSRR119 pKa = 11.84KK120 pKa = 9.25QIVDD124 pKa = 3.05KK125 pKa = 11.05RR126 pKa = 11.84RR127 pKa = 11.84VSFDD131 pKa = 3.34DD132 pKa = 3.89ARR134 pKa = 11.84MHH136 pKa = 5.51EE137 pKa = 4.01TWIRR141 pKa = 11.84EE142 pKa = 3.95RR143 pKa = 11.84TEE145 pKa = 3.81TLTQQEE151 pKa = 4.37DD152 pKa = 3.82APARR156 pKa = 11.84LLSQPPVRR164 pKa = 11.84ASLQRR169 pKa = 11.84RR170 pKa = 11.84ARR172 pKa = 11.84SVSSEE177 pKa = 3.88HH178 pKa = 7.14GYY180 pKa = 8.4ATYY183 pKa = 10.55QPGRR187 pKa = 11.84GASLYY192 pKa = 10.45GRR194 pKa = 11.84PQSSTDD200 pKa = 3.39QASDD204 pKa = 3.46PDD206 pKa = 4.23GPGDD210 pKa = 3.49SSMLRR215 pKa = 11.84RR216 pKa = 11.84LEE218 pKa = 3.86VSFEE222 pKa = 4.34KK223 pKa = 10.53IATLQEE229 pKa = 3.83LRR231 pKa = 11.84EE232 pKa = 4.4TCEE235 pKa = 3.6HH236 pKa = 5.44TRR238 pKa = 11.84EE239 pKa = 3.88LRR241 pKa = 11.84LVNTYY246 pKa = 9.14FNRR249 pKa = 11.84WFGNTHH255 pKa = 6.44LHH257 pKa = 4.7QQHH260 pKa = 5.89VARR263 pKa = 11.84QHH265 pKa = 6.22SEE267 pKa = 3.97AEE269 pKa = 4.03EE270 pKa = 3.69QHH272 pKa = 6.98AKK274 pKa = 10.24VLCQAVFDD282 pKa = 3.94SWRR285 pKa = 11.84EE286 pKa = 3.82AFHH289 pKa = 6.69EE290 pKa = 4.07KK291 pKa = 10.33QILRR295 pKa = 11.84RR296 pKa = 11.84EE297 pKa = 4.0ALEE300 pKa = 4.17AEE302 pKa = 4.45EE303 pKa = 5.52AEE305 pKa = 4.78QEE307 pKa = 4.25RR308 pKa = 11.84QSQQQQEE315 pKa = 4.41DD316 pKa = 3.41EE317 pKa = 4.17RR318 pKa = 11.84MQRR321 pKa = 11.84LGQRR325 pKa = 11.84AEE327 pKa = 3.82KK328 pKa = 10.63CRR330 pKa = 11.84GKK332 pKa = 9.53MLLRR336 pKa = 11.84KK337 pKa = 9.45GLQHH341 pKa = 6.06WFARR345 pKa = 11.84HH346 pKa = 4.04EE347 pKa = 4.05VRR349 pKa = 11.84RR350 pKa = 11.84AEE352 pKa = 4.13LQRR355 pKa = 11.84ASKK358 pKa = 10.31FLLAMRR364 pKa = 11.84YY365 pKa = 7.15FRR367 pKa = 11.84RR368 pKa = 11.84WKK370 pKa = 10.52HH371 pKa = 5.06IALEE375 pKa = 4.24NASKK379 pKa = 10.66ARR381 pKa = 11.84SILTRR386 pKa = 11.84KK387 pKa = 9.47YY388 pKa = 8.63IRR390 pKa = 11.84VWRR393 pKa = 11.84EE394 pKa = 3.13RR395 pKa = 11.84TARR398 pKa = 11.84SHH400 pKa = 6.48LAEE403 pKa = 4.27EE404 pKa = 4.26QAAAHH409 pKa = 6.43HH410 pKa = 6.66EE411 pKa = 4.33EE412 pKa = 4.21TLQRR416 pKa = 11.84QCVKK420 pKa = 9.9RR421 pKa = 11.84WAKK424 pKa = 10.37VLFNIKK430 pKa = 10.04LEE432 pKa = 3.78KK433 pKa = 10.3RR434 pKa = 11.84RR435 pKa = 11.84IDD437 pKa = 4.08RR438 pKa = 11.84IKK440 pKa = 10.58HH441 pKa = 4.42AACRR445 pKa = 11.84KK446 pKa = 9.04WLDD449 pKa = 3.02AVQRR453 pKa = 11.84VRR455 pKa = 11.84ALEE458 pKa = 4.03AQAAAFRR465 pKa = 11.84SQRR468 pKa = 11.84LVRR471 pKa = 11.84PVLLALRR478 pKa = 11.84AGVLRR483 pKa = 11.84VQDD486 pKa = 3.89LASRR490 pKa = 11.84AQTCYY495 pKa = 10.31AQARR499 pKa = 11.84LTIAFSVMRR508 pKa = 11.84IQGRR512 pKa = 11.84LKK514 pKa = 10.03PLEE517 pKa = 3.92NVMTLRR523 pKa = 11.84LNLTLEE529 pKa = 4.38RR530 pKa = 11.84KK531 pKa = 9.65AFATWHH537 pKa = 6.03LQVQLAQQAAHH548 pKa = 6.68FDD550 pKa = 3.23QRR552 pKa = 11.84RR553 pKa = 11.84IKK555 pKa = 9.92RR556 pKa = 11.84AAWHH560 pKa = 6.0GWVDD564 pKa = 3.43ALKK567 pKa = 10.39CRR569 pKa = 11.84VVAQHH574 pKa = 5.58INARR578 pKa = 11.84VVIEE582 pKa = 4.18SLYY585 pKa = 10.72RR586 pKa = 11.84WMLQEE591 pKa = 3.98RR592 pKa = 11.84LQLFRR597 pKa = 11.84RR598 pKa = 11.84TADD601 pKa = 3.02ARR603 pKa = 11.84LLRR606 pKa = 11.84NSFAALKK613 pKa = 10.71GMSTDD618 pKa = 3.74LQAQLDD624 pKa = 3.7MRR626 pKa = 11.84AYY628 pKa = 10.59AFAQGQQRR636 pKa = 11.84RR637 pKa = 11.84RR638 pKa = 11.84LAGAMFRR645 pKa = 11.84LHH647 pKa = 5.37VLSRR651 pKa = 11.84RR652 pKa = 11.84RR653 pKa = 11.84EE654 pKa = 3.97DD655 pKa = 3.26AEE657 pKa = 3.88RR658 pKa = 11.84AAVEE662 pKa = 4.24FANSRR667 pKa = 11.84ALPAVLEE674 pKa = 4.36TWHH677 pKa = 6.79EE678 pKa = 4.32KK679 pKa = 6.36TTHH682 pKa = 4.0VTKK685 pKa = 10.82LNRR688 pKa = 11.84WATDD692 pKa = 2.64ARR694 pKa = 11.84FYY696 pKa = 10.45CLCSAALKK704 pKa = 9.68RR705 pKa = 11.84WRR707 pKa = 11.84DD708 pKa = 3.26ATVEE712 pKa = 4.08HH713 pKa = 5.09QHH715 pKa = 5.02QRR717 pKa = 11.84RR718 pKa = 11.84RR719 pKa = 11.84DD720 pKa = 3.11AYY722 pKa = 8.04AQVRR726 pKa = 11.84SRR728 pKa = 11.84YY729 pKa = 7.5KK730 pKa = 10.12HH731 pKa = 6.23RR732 pKa = 11.84LVGQCFASLQVKK744 pKa = 8.82YY745 pKa = 11.07AEE747 pKa = 4.49VYY749 pKa = 10.82SMSAAIQDD757 pKa = 3.81RR758 pKa = 11.84AQTTQTTTVAQLFATWRR775 pKa = 11.84SRR777 pKa = 11.84ARR779 pKa = 11.84TLQAQSLTASQLDD792 pKa = 3.75TSRR795 pKa = 11.84LLSSALSALTSQHH808 pKa = 6.09AQTTSLDD815 pKa = 3.69TEE817 pKa = 4.43AEE819 pKa = 4.21TFARR823 pKa = 11.84TTSLSLALSALKK835 pKa = 9.26TLQWATFTASQQSHH849 pKa = 5.21TALALRR855 pKa = 11.84SRR857 pKa = 11.84NRR859 pKa = 11.84EE860 pKa = 3.29QHH862 pKa = 5.03IRR864 pKa = 11.84HH865 pKa = 5.98MLRR868 pKa = 11.84HH869 pKa = 5.53WVSQTAARR877 pKa = 11.84RR878 pKa = 11.84AAATAEE884 pKa = 3.95PDD886 pKa = 3.49AEE888 pKa = 4.51LEE890 pKa = 4.42AEE892 pKa = 4.35PEE894 pKa = 4.4SPSLRR899 pKa = 11.84PASRR903 pKa = 11.84AAARR907 pKa = 11.84SLSRR911 pKa = 11.84DD912 pKa = 3.69RR913 pKa = 11.84IRR915 pKa = 11.84DD916 pKa = 3.37RR917 pKa = 11.84YY918 pKa = 8.4TSPTRR923 pKa = 11.84LPQGYY928 pKa = 9.96AGSTPGYY935 pKa = 9.68LRR937 pKa = 11.84TPSRR941 pKa = 11.84SRR943 pKa = 11.84RR944 pKa = 11.84AVGRR948 pKa = 11.84FRR950 pKa = 11.84PIPTPGPYY958 pKa = 9.31TPLAFTPAYY967 pKa = 9.8LVTGIPGVQVDD978 pKa = 4.9DD979 pKa = 4.55GAGLDD984 pKa = 4.01MGSSPPLPMALAGSGQVTPFAQRR1007 pKa = 11.84LRR1009 pKa = 11.84EE1010 pKa = 4.11VGVVEE1015 pKa = 5.68AIPTGAITGAGAEE1028 pKa = 4.0FRR1030 pKa = 11.84PVSVLRR1036 pKa = 11.84RR1037 pKa = 11.84GLRR1040 pKa = 11.84QSVTGGTGTGKK1051 pKa = 9.69SVRR1054 pKa = 11.84FAGAGRR1060 pKa = 11.84FSSVGGGSRR1069 pKa = 11.84GQEE1072 pKa = 3.91HH1073 pKa = 6.94LKK1075 pKa = 10.97SSS1077 pKa = 3.56

Molecular weight: 122.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18598

0

18598

9390076

50

6082

504.9

55.43

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.694 ± 0.016

1.083 ± 0.006

5.769 ± 0.015

6.108 ± 0.017

3.367 ± 0.012

7.231 ± 0.018

2.384 ± 0.008

4.44 ± 0.014

4.701 ± 0.015

8.719 ± 0.02

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.202 ± 0.008

3.33 ± 0.01

6.047 ± 0.019

4.04 ± 0.013

6.198 ± 0.018

8.127 ± 0.018

6.293 ± 0.014

6.209 ± 0.013

1.392 ± 0.006

2.668 ± 0.009
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski