Wenzhou tombus-like virus 10

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.68

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KH44|A0A1L3KH44_9VIRU Uncharacterized protein OS=Wenzhou tombus-like virus 10 OX=1923663 PE=4 SV=1
MM1 pKa = 7.87TDD3 pKa = 3.12QQFHH7 pKa = 6.39MLPKK11 pKa = 10.41LVRR14 pKa = 11.84QFVLRR19 pKa = 11.84RR20 pKa = 11.84VRR22 pKa = 11.84TTIRR26 pKa = 11.84RR27 pKa = 11.84RR28 pKa = 11.84CVNRR32 pKa = 11.84GRR34 pKa = 11.84GKK36 pKa = 10.81LLGNKK41 pKa = 8.15MMHH44 pKa = 6.83ALNGNTTDD52 pKa = 3.67YY53 pKa = 11.36VKK55 pKa = 10.22WKK57 pKa = 10.46QSFDD61 pKa = 3.52EE62 pKa = 4.4SLKK65 pKa = 7.86TTNDD69 pKa = 2.76KK70 pKa = 10.95SRR72 pKa = 11.84QQRR75 pKa = 11.84VDD77 pKa = 3.0MNIRR81 pKa = 11.84VSVDD85 pKa = 3.14MPKK88 pKa = 9.48TFSLTHH94 pKa = 6.92DD95 pKa = 4.4LAAMAFVAVLDD106 pKa = 3.62GFMYY110 pKa = 10.57HH111 pKa = 7.01IAFDD115 pKa = 3.89YY116 pKa = 10.73LKK118 pKa = 10.36KK119 pKa = 10.84GKK121 pKa = 9.79AKK123 pKa = 10.37RR124 pKa = 11.84IIVEE128 pKa = 4.05MPHH131 pKa = 6.51PVNGCTKK138 pKa = 10.02QCGWDD143 pKa = 3.69DD144 pKa = 3.77NVVRR148 pKa = 11.84SYY150 pKa = 10.26PAPLLINDD158 pKa = 5.51IIPIPLPCEE167 pKa = 3.84VTFGRR172 pKa = 11.84NGLQKK177 pKa = 10.73HH178 pKa = 6.57FITDD182 pKa = 3.09DD183 pKa = 3.81DD184 pKa = 4.39YY185 pKa = 12.13ADD187 pKa = 4.09FDD189 pKa = 4.35IPLDD193 pKa = 4.13DD194 pKa = 4.53SLSNLQYY201 pKa = 11.44DD202 pKa = 4.11SDD204 pKa = 4.09TKK206 pKa = 10.67SWNSAGSPAQSTSSNVSGVTAPSSSTPTPSTSAPPPKK243 pKa = 10.18SNKK246 pKa = 8.52QLSIVRR252 pKa = 11.84RR253 pKa = 11.84SDD255 pKa = 3.43SKK257 pKa = 10.55VQTPSVEE264 pKa = 3.75QRR266 pKa = 11.84VCVVPPLQPTPSQPTPPPTLAAPRR290 pKa = 11.84VVSEE294 pKa = 5.35GYY296 pKa = 8.56TEE298 pKa = 3.92PHH300 pKa = 5.67TRR302 pKa = 11.84LHH304 pKa = 5.95FLARR308 pKa = 11.84HH309 pKa = 5.97AAQISEE315 pKa = 4.44VEE317 pKa = 4.45RR318 pKa = 11.84PQLPDD323 pKa = 3.26FTEE326 pKa = 3.77NPYY329 pKa = 10.44RR330 pKa = 11.84KK331 pKa = 8.73WVAEE335 pKa = 3.92VLLGDD340 pKa = 3.86RR341 pKa = 11.84NNPNMQFPLLDD352 pKa = 3.75LRR354 pKa = 11.84SPLAIWMSSGSFKK367 pKa = 10.71TVMRR371 pKa = 11.84KK372 pKa = 9.85HH373 pKa = 5.27IQYY376 pKa = 9.53GNSMGLDD383 pKa = 3.27AEE385 pKa = 4.47MLVHH389 pKa = 6.89LVRR392 pKa = 11.84LITEE396 pKa = 3.86KK397 pKa = 10.95RR398 pKa = 11.84EE399 pKa = 3.97ASSFATLYY407 pKa = 10.47HH408 pKa = 7.08KK409 pKa = 10.72AYY411 pKa = 8.76TWASHH416 pKa = 6.21NRR418 pKa = 11.84EE419 pKa = 4.22DD420 pKa = 3.98WPLGLSDD427 pKa = 4.34AQSAGCARR435 pKa = 11.84YY436 pKa = 7.7TLGTSSLYY444 pKa = 10.9ASLLNNITPGVSEE457 pKa = 4.49EE458 pKa = 4.42SFDD461 pKa = 4.45VDD463 pKa = 3.53PQINPVYY470 pKa = 9.25ATKK473 pKa = 10.5NRR475 pKa = 11.84RR476 pKa = 11.84NFVYY480 pKa = 10.47NVVLIILFILFSYY493 pKa = 9.97AAYY496 pKa = 8.68HH497 pKa = 5.66TFRR500 pKa = 11.84FARR503 pKa = 11.84YY504 pKa = 9.53VDD506 pKa = 2.94GHH508 pKa = 5.56YY509 pKa = 11.2NRR511 pKa = 11.84FAAYY515 pKa = 10.24ADD517 pKa = 3.42NSFEE521 pKa = 4.25NFGNQFTAFAAVTYY535 pKa = 10.21GSSCFTHH542 pKa = 6.42EE543 pKa = 5.45RR544 pKa = 11.84IGCALGDD551 pKa = 3.57NDD553 pKa = 4.96CYY555 pKa = 10.97RR556 pKa = 11.84RR557 pKa = 11.84NCRR560 pKa = 11.84DD561 pKa = 3.22LLRR564 pKa = 11.84IYY566 pKa = 10.75HH567 pKa = 6.92PDD569 pKa = 2.84KK570 pKa = 11.09GGNVDD575 pKa = 3.73SYY577 pKa = 9.07THH579 pKa = 5.7VARR582 pKa = 11.84DD583 pKa = 3.82CEE585 pKa = 4.19FLNKK589 pKa = 10.31GGEE592 pKa = 4.03QPVYY596 pKa = 10.42EE597 pKa = 4.22NCAYY601 pKa = 10.4ANKK604 pKa = 10.23EE605 pKa = 3.92EE606 pKa = 4.4GVSFEE611 pKa = 4.8LNEE614 pKa = 4.11LYY616 pKa = 11.06VRR618 pKa = 11.84FSQFAKK624 pKa = 10.12TRR626 pKa = 11.84GIDD629 pKa = 3.56ADD631 pKa = 4.07FGDD634 pKa = 3.94YY635 pKa = 10.8DD636 pKa = 4.48YY637 pKa = 11.2FFQAAPSSNPICDD650 pKa = 3.05AVKK653 pKa = 10.66NGEE656 pKa = 4.34SVPKK660 pKa = 8.98EE661 pKa = 3.77VLMICQFFKK670 pKa = 11.13LRR672 pKa = 11.84DD673 pKa = 3.96FRR675 pKa = 11.84PSCYY679 pKa = 10.04NYY681 pKa = 10.69SSFFNAYY688 pKa = 9.56GSMYY692 pKa = 10.06HH693 pKa = 6.31NGIIFQSIFPTMVSICVSFGKK714 pKa = 10.02GQTMRR719 pKa = 11.84EE720 pKa = 3.88HH721 pKa = 6.67MFTEE725 pKa = 5.19VYY727 pKa = 9.17YY728 pKa = 10.83TMAFQYY734 pKa = 10.88CCVCCFVALISVLFATLAIYY754 pKa = 7.49PTVKK758 pKa = 10.16KK759 pKa = 10.85AFIEE763 pKa = 3.87RR764 pKa = 11.84GFRR767 pKa = 11.84VGCSVWVSKK776 pKa = 11.02CSVTGVTSAAIMATFILIKK795 pKa = 10.47EE796 pKa = 4.04RR797 pKa = 11.84DD798 pKa = 3.93LLCRR802 pKa = 11.84ASSAAYY808 pKa = 9.23VARR811 pKa = 11.84ALKK814 pKa = 10.27EE815 pKa = 3.78LLLLVISGLRR825 pKa = 11.84SLWAAAAAA833 pKa = 4.07

Molecular weight: 93.82 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KH44|A0A1L3KH44_9VIRU Uncharacterized protein OS=Wenzhou tombus-like virus 10 OX=1923663 PE=4 SV=1
MM1 pKa = 7.17FGYY4 pKa = 9.99RR5 pKa = 11.84RR6 pKa = 11.84HH7 pKa = 6.09ICSHH11 pKa = 6.6HH12 pKa = 6.69GNLHH16 pKa = 5.8TYY18 pKa = 7.89QRR20 pKa = 11.84EE21 pKa = 3.91RR22 pKa = 11.84SIVPCVVSSVCSSSSEE38 pKa = 3.9GAVIVGNKK46 pKa = 7.3WVAQPLGSGCSMSRR60 pKa = 11.84TNQQSEE66 pKa = 4.36SCSAKK71 pKa = 9.11FCKK74 pKa = 10.15FLTIKK79 pKa = 10.59NSRR82 pKa = 11.84TWDD85 pKa = 4.28PIVFSPCSHH94 pKa = 6.33NFMLAAKK101 pKa = 10.09SRR103 pKa = 11.84ILKK106 pKa = 7.52EE107 pKa = 4.22TPQPEE112 pKa = 4.09DD113 pKa = 3.29EE114 pKa = 4.31YY115 pKa = 11.47LRR117 pKa = 11.84RR118 pKa = 11.84FALSLHH124 pKa = 6.17AVAKK128 pKa = 10.47SIFVKK133 pKa = 8.71QTPLTRR139 pKa = 11.84EE140 pKa = 4.1EE141 pKa = 4.11FLSAYY146 pKa = 10.15SGSKK150 pKa = 9.11RR151 pKa = 11.84LRR153 pKa = 11.84YY154 pKa = 10.25AMAADD159 pKa = 3.66RR160 pKa = 11.84VYY162 pKa = 11.21DD163 pKa = 3.77VDD165 pKa = 4.95DD166 pKa = 4.75GSIKK170 pKa = 10.21HH171 pKa = 6.1ASSFVKK177 pKa = 10.43LQRR180 pKa = 11.84FDD182 pKa = 3.64PTSKK186 pKa = 8.93EE187 pKa = 3.98HH188 pKa = 4.85QVPRR192 pKa = 11.84VVSFRR197 pKa = 11.84QYY199 pKa = 10.59TNAFSLGRR207 pKa = 11.84YY208 pKa = 8.38IRR210 pKa = 11.84PLEE213 pKa = 4.12HH214 pKa = 6.42QFVNAPSFGRR224 pKa = 11.84FKK226 pKa = 10.82GYY228 pKa = 10.0RR229 pKa = 11.84WLAKK233 pKa = 9.13TRR235 pKa = 11.84NLTQRR240 pKa = 11.84ATDD243 pKa = 3.86ISLIWDD249 pKa = 4.44MIPNVCCVSIDD260 pKa = 3.35ASRR263 pKa = 11.84FEE265 pKa = 4.05AHH267 pKa = 6.03VSKK270 pKa = 11.29DD271 pKa = 3.35MLSLEE276 pKa = 4.17FEE278 pKa = 4.71TYY280 pKa = 10.39SDD282 pKa = 4.21AYY284 pKa = 10.69RR285 pKa = 11.84GDD287 pKa = 3.34ARR289 pKa = 11.84LVKK292 pKa = 9.6MLKK295 pKa = 10.69AMLATKK301 pKa = 8.92MHH303 pKa = 6.3TKK305 pKa = 10.63YY306 pKa = 10.78GLKK309 pKa = 10.32CSILGRR315 pKa = 11.84RR316 pKa = 11.84LSGDD320 pKa = 2.89MCTSLGNALLMCGMLNFISEE340 pKa = 4.56DD341 pKa = 3.46LNIDD345 pKa = 3.82FKK347 pKa = 11.18IYY349 pKa = 10.53DD350 pKa = 4.7DD351 pKa = 5.94GDD353 pKa = 3.91DD354 pKa = 4.88CLLFMNKK361 pKa = 9.36NLLPRR366 pKa = 11.84LEE368 pKa = 4.01EE369 pKa = 3.6MRR371 pKa = 11.84NCFKK375 pKa = 11.04RR376 pKa = 11.84LGFDD380 pKa = 3.27VRR382 pKa = 11.84VDD384 pKa = 4.05KK385 pKa = 10.83IAYY388 pKa = 8.35CLEE391 pKa = 4.44EE392 pKa = 4.24IVFCQSHH399 pKa = 7.07PIYY402 pKa = 9.29WAPGQGVLCPDD413 pKa = 4.17PDD415 pKa = 3.41KK416 pKa = 11.52HH417 pKa = 6.2MSALYY422 pKa = 9.79TGTSYY427 pKa = 11.14GRR429 pKa = 11.84SARR432 pKa = 11.84RR433 pKa = 11.84DD434 pKa = 3.34RR435 pKa = 11.84LIAFSTAMCCLSFLTNIPILGAFHH459 pKa = 7.05SMVHH463 pKa = 6.57RR464 pKa = 11.84ATATKK469 pKa = 10.42RR470 pKa = 11.84KK471 pKa = 9.06MIFPDD476 pKa = 3.07RR477 pKa = 11.84TLEE480 pKa = 3.78YY481 pKa = 10.12LYY483 pKa = 10.8KK484 pKa = 10.95NNSSCSKK491 pKa = 10.81CPGLNDD497 pKa = 3.62ALRR500 pKa = 11.84VSFYY504 pKa = 11.02LAFGYY509 pKa = 8.71TPSQQEE515 pKa = 3.66QLEE518 pKa = 4.34EE519 pKa = 4.38HH520 pKa = 6.93FDD522 pKa = 3.45TTLLHH527 pKa = 6.32FKK529 pKa = 10.31HH530 pKa = 6.0YY531 pKa = 11.07AEE533 pKa = 5.03LSQPVFDD540 pKa = 4.94YY541 pKa = 9.87ITWTSVTDD549 pKa = 3.94TPACQLDD556 pKa = 3.72APTT559 pKa = 4.45

Molecular weight: 63.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1392

559

833

696.0

78.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.543 ± 0.44

3.233 ± 0.415

5.46 ± 0.051

3.951 ± 0.096

5.819 ± 0.056

4.885 ± 0.138

2.73 ± 0.289

4.454 ± 0.011

4.813 ± 0.327

8.477 ± 0.593

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.802 ± 0.247

4.382 ± 0.581

5.029 ± 0.434

3.376 ± 0.092

6.537 ± 0.26

8.908 ± 0.444

5.675 ± 0.077

6.466 ± 0.755

1.078 ± 0.003

4.382 ± 0.158
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski