Lemur associated porprismacovirus 1

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus

Average proteome isoelectric point is 6.98

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B5GP14|A0A0B5GP14_9VIRU Rep protein OS=Lemur associated porprismacovirus 1 OX=2170115 GN=rep PE=4 SV=1
MM1 pKa = 7.83RR2 pKa = 11.84VQISEE7 pKa = 4.39TYY9 pKa = 10.65DD10 pKa = 3.21LSTKK14 pKa = 8.92INKK17 pKa = 8.59MGIVGIHH24 pKa = 5.65TPVGPLLNRR33 pKa = 11.84LYY35 pKa = 10.35PGLVLNYY42 pKa = 10.33KK43 pKa = 9.97KK44 pKa = 10.69FRR46 pKa = 11.84FSKK49 pKa = 10.72CDD51 pKa = 2.92ITLACASMLPADD63 pKa = 4.27PLQVGVEE70 pKa = 4.24AGAIAPQDD78 pKa = 3.66MFNPILFKK86 pKa = 10.81AVSNDD91 pKa = 2.84TMNQFVNYY99 pKa = 7.83IQYY102 pKa = 10.69YY103 pKa = 7.96GASNKK108 pKa = 8.52TLALDD113 pKa = 4.25GSSVVAVNDD122 pKa = 3.71AVFKK126 pKa = 11.03AGSTQATDD134 pKa = 3.34QFSLYY139 pKa = 10.36YY140 pKa = 10.58SLLADD145 pKa = 3.51PKK147 pKa = 9.26GWRR150 pKa = 11.84KK151 pKa = 9.97AMPQSGLQMRR161 pKa = 11.84NLRR164 pKa = 11.84PLVFQVVEE172 pKa = 4.5NGAPLQGRR180 pKa = 11.84VGVADD185 pKa = 4.35PATGDD190 pKa = 3.46INSGAFIGDD199 pKa = 3.77PASGQSYY206 pKa = 8.62TGEE209 pKa = 4.12SWGVPSDD216 pKa = 3.64ASGTAVLSSNKK227 pKa = 9.52GVNIYY232 pKa = 10.1RR233 pKa = 11.84GRR235 pKa = 11.84AIRR238 pKa = 11.84MPWISTKK245 pKa = 10.25FFNNGTGVADD255 pKa = 4.45SNTIMPSFAQIVEE268 pKa = 4.27GTNVSTNTGRR278 pKa = 11.84VPPTYY283 pKa = 9.19VACIIVPPAKK293 pKa = 10.61LNVLYY298 pKa = 11.08YY299 pKa = 10.4RR300 pKa = 11.84MKK302 pKa = 9.73VTWTVEE308 pKa = 4.08FTGLSSMTPYY318 pKa = 10.84LGWNDD323 pKa = 3.61LTDD326 pKa = 3.85TADD329 pKa = 2.99IAYY332 pKa = 7.57GTDD335 pKa = 3.31YY336 pKa = 11.66ANQASVAMTSLEE348 pKa = 4.24TMVDD352 pKa = 3.26TSEE355 pKa = 4.21VDD357 pKa = 2.94MSKK360 pKa = 10.44IMEE363 pKa = 4.23GG364 pKa = 3.32

Molecular weight: 39.24 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B5GP14|A0A0B5GP14_9VIRU Rep protein OS=Lemur associated porprismacovirus 1 OX=2170115 GN=rep PE=4 SV=1
MM1 pKa = 7.21TNVYY5 pKa = 9.44MITMPRR11 pKa = 11.84KK12 pKa = 9.07GYY14 pKa = 10.4SGFIAIMRR22 pKa = 11.84FFRR25 pKa = 11.84KK26 pKa = 9.61FDD28 pKa = 3.26VHH30 pKa = 6.97KK31 pKa = 10.34WIVSPEE37 pKa = 3.9KK38 pKa = 10.01GAQGYY43 pKa = 7.27EE44 pKa = 3.37HH45 pKa = 6.01WQIRR49 pKa = 11.84FRR51 pKa = 11.84CGLTPEE57 pKa = 4.2NAMIAWRR64 pKa = 11.84QWVCNGFNMLEE75 pKa = 4.09ASDD78 pKa = 4.79NGWEE82 pKa = 4.08YY83 pKa = 10.96EE84 pKa = 4.13GKK86 pKa = 9.97EE87 pKa = 4.29GKK89 pKa = 9.86FLASWDD95 pKa = 3.92SKK97 pKa = 9.87GARR100 pKa = 11.84SVRR103 pKa = 11.84FGKK106 pKa = 9.07MEE108 pKa = 3.63WRR110 pKa = 11.84QEE112 pKa = 4.02ATVLRR117 pKa = 11.84ARR119 pKa = 11.84ATNDD123 pKa = 2.97RR124 pKa = 11.84EE125 pKa = 4.06IVVWYY130 pKa = 9.72DD131 pKa = 3.16PKK133 pKa = 11.42GNSGKK138 pKa = 9.99SWLVGHH144 pKa = 6.86LVEE147 pKa = 4.86TRR149 pKa = 11.84QAYY152 pKa = 7.69YY153 pKa = 10.42VPPYY157 pKa = 9.89LATVEE162 pKa = 4.82SMIKK166 pKa = 9.11TLASMVKK173 pKa = 10.14ADD175 pKa = 4.83RR176 pKa = 11.84EE177 pKa = 4.32NGNPPRR183 pKa = 11.84PLVVIDD189 pKa = 3.94IPRR192 pKa = 11.84SYY194 pKa = 10.36KK195 pKa = 9.16WKK197 pKa = 9.38NDD199 pKa = 3.0MYY201 pKa = 11.33VAIEE205 pKa = 4.42AIKK208 pKa = 10.62DD209 pKa = 3.88GIIVDD214 pKa = 3.85PRR216 pKa = 11.84YY217 pKa = 10.12SATVEE222 pKa = 3.95NVKK225 pKa = 10.88GIGVIVITNEE235 pKa = 3.49KK236 pKa = 8.57PQVGKK241 pKa = 10.76LSADD245 pKa = 2.98RR246 pKa = 11.84WDD248 pKa = 3.48IVDD251 pKa = 3.32WW252 pKa = 4.39

Molecular weight: 29.09 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

616

252

364

308.0

34.17

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.117 ± 0.584

0.812 ± 0.011

5.357 ± 0.119

4.058 ± 1.375

3.409 ± 0.141

8.117 ± 0.346

0.649 ± 0.325

6.006 ± 0.682

5.357 ± 1.072

5.844 ± 1.126

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

4.058 ± 0.054

5.519 ± 0.455

5.357 ± 0.357

3.247 ± 0.52

4.87 ± 1.364

6.981 ± 1.093

6.169 ± 1.32

8.929 ± 0.119

2.76 ± 1.201

4.383 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski