Guinea pig adenovirus

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Mastadenovirus; unclassified Mastadenovirus

Average proteome isoelectric point is 7.44

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 32 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6H1TG59|A0A6H1TG59_9ADEN Pre-hexon-linking protein VIII OS=Guinea pig adenovirus OX=47901 GN=L4 PE=2 SV=1
MM1 pKa = 7.9DD2 pKa = 5.24LCSFSVEE9 pKa = 4.04QLGTGARR16 pKa = 11.84SPEE19 pKa = 3.96PFGLGVASVVFYY31 pKa = 10.82SSEE34 pKa = 4.28SVVVYY39 pKa = 10.8AGDD42 pKa = 3.68TLVVDD47 pKa = 3.67TGVYY51 pKa = 10.26GLLSEE56 pKa = 5.88GYY58 pKa = 9.92FGTLGALPGSVSGLNSCVVSGLVPGGMRR86 pKa = 11.84HH87 pKa = 4.92RR88 pKa = 11.84VRR90 pKa = 11.84VTVSNWGAHH99 pKa = 5.3RR100 pKa = 11.84CHH102 pKa = 6.49IRR104 pKa = 11.84VGSPLCMMLVHH115 pKa = 6.58EE116 pKa = 4.75SVVCRR121 pKa = 11.84VEE123 pKa = 4.11RR124 pKa = 11.84AEE126 pKa = 4.34GDD128 pKa = 3.69SLPRR132 pKa = 11.84PRR134 pKa = 11.84DD135 pKa = 3.15PVARR139 pKa = 11.84RR140 pKa = 11.84LRR142 pKa = 11.84WEE144 pKa = 4.65DD145 pKa = 3.39DD146 pKa = 3.85GEE148 pKa = 5.69DD149 pKa = 3.98GGSSTDD155 pKa = 3.23TDD157 pKa = 4.07FLEE160 pKa = 4.58PDD162 pKa = 3.61DD163 pKa = 4.36RR164 pKa = 11.84VGRR167 pKa = 11.84PASVAATAAAARR179 pKa = 11.84SEE181 pKa = 4.76SEE183 pKa = 5.47DD184 pKa = 3.51SDD186 pKa = 3.43ATNIDD191 pKa = 3.97DD192 pKa = 4.03TTTDD196 pKa = 3.37DD197 pKa = 4.22DD198 pKa = 4.59EE199 pKa = 4.72EE200 pKa = 4.86VEE202 pKa = 4.01EE203 pKa = 5.75DD204 pKa = 3.56EE205 pKa = 5.35NEE207 pKa = 3.93DD208 pKa = 3.47RR209 pKa = 11.84GGGGGGGGAVTRR221 pKa = 11.84GDD223 pKa = 3.14EE224 pKa = 4.36GMDD227 pKa = 3.32EE228 pKa = 4.1EE229 pKa = 5.53VVFRR233 pKa = 11.84PEE235 pKa = 3.76AGGEE239 pKa = 4.03MEE241 pKa = 4.28GQEE244 pKa = 4.1GRR246 pKa = 11.84TPEE249 pKa = 4.32PEE251 pKa = 4.34PASEE255 pKa = 3.95AHH257 pKa = 6.89PEE259 pKa = 3.98PEE261 pKa = 4.69PEE263 pKa = 4.18RR264 pKa = 11.84DD265 pKa = 3.16WVDD268 pKa = 3.31QMVPLFQSLVFQITLDD284 pKa = 3.5GTAVKK289 pKa = 10.36EE290 pKa = 4.37SILGKK295 pKa = 9.64LVRR298 pKa = 11.84GMLDD302 pKa = 2.81QVRR305 pKa = 11.84NVLVFEE311 pKa = 3.86HH312 pKa = 6.52HH313 pKa = 6.17MRR315 pKa = 11.84MEE317 pKa = 4.62GPGLSSRR324 pKa = 11.84ARR326 pKa = 11.84RR327 pKa = 11.84RR328 pKa = 11.84YY329 pKa = 9.81RR330 pKa = 11.84SLLDD334 pKa = 3.4AALGEE339 pKa = 4.35RR340 pKa = 11.84GSARR344 pKa = 11.84RR345 pKa = 11.84LRR347 pKa = 11.84LHH349 pKa = 6.58LPEE352 pKa = 4.87HH353 pKa = 6.39RR354 pKa = 11.84RR355 pKa = 11.84AMDD358 pKa = 3.82LGFVSMSQRR367 pKa = 11.84RR368 pKa = 11.84EE369 pKa = 3.86SRR371 pKa = 11.84WRR373 pKa = 11.84VVCDD377 pKa = 3.19LTVGGMRR384 pKa = 11.84YY385 pKa = 9.75DD386 pKa = 3.57VQDD389 pKa = 4.06PQDD392 pKa = 4.34LLTEE396 pKa = 4.09LRR398 pKa = 11.84DD399 pKa = 3.85TVEE402 pKa = 4.09HH403 pKa = 5.4YY404 pKa = 8.37WRR406 pKa = 11.84RR407 pKa = 11.84RR408 pKa = 11.84GPGVAVDD415 pKa = 3.63VCRR418 pKa = 11.84SPNLFF423 pKa = 3.67

Molecular weight: 46.28 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6H1TF03|A0A6H1TF03_9ADEN PVI OS=Guinea pig adenovirus OX=47901 PE=4 SV=1
MM1 pKa = 7.5TSAQKK6 pKa = 10.87SSVSKK11 pKa = 10.56KK12 pKa = 10.21AALSTLSAPLARR24 pKa = 11.84SAARR28 pKa = 11.84RR29 pKa = 11.84SSSWSAKK36 pKa = 6.67TLRR39 pKa = 11.84LLSSRR44 pKa = 11.84VAKK47 pKa = 10.28EE48 pKa = 3.69PYY50 pKa = 9.7RR51 pKa = 11.84EE52 pKa = 4.15LDD54 pKa = 2.94SSLAMLRR61 pKa = 11.84RR62 pKa = 11.84VALRR66 pKa = 11.84SASARR71 pKa = 11.84SLAAMFTLTYY81 pKa = 10.54SRR83 pKa = 11.84ARR85 pKa = 11.84QFQAGNTVVRR95 pKa = 11.84SSGTTRR101 pKa = 11.84TRR103 pKa = 11.84QPRR106 pKa = 11.84LQRR109 pKa = 11.84VTASRR114 pKa = 11.84LVHH117 pKa = 5.47TSPRR121 pKa = 11.84RR122 pKa = 11.84RR123 pKa = 11.84SLVQHH128 pKa = 5.85SRR130 pKa = 11.84PPRR133 pKa = 11.84RR134 pKa = 11.84EE135 pKa = 3.6QKK137 pKa = 10.73GGSTSNRR144 pKa = 11.84RR145 pKa = 11.84SSGGSASITNMAGRR159 pKa = 11.84RR160 pKa = 11.84RR161 pKa = 11.84LSKK164 pKa = 10.88

Molecular weight: 18.01 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

31

1

32

12081

77

1111

377.5

41.47

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.603 ± 0.479

1.763 ± 0.32

5.769 ± 0.375

4.801 ± 0.405

3.377 ± 0.247

7.599 ± 0.59

2.988 ± 0.319

2.409 ± 0.2

2.102 ± 0.219

8.633 ± 0.46

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.763 ± 0.141

3.104 ± 0.369

7.251 ± 0.505

3.551 ± 0.274

9.56 ± 0.503

6.829 ± 0.437

5.827 ± 0.323

8.054 ± 0.482

1.068 ± 0.131

2.947 ± 0.254
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski