Amino acid dipepetide frequency for Wenling picorna-like virus 6

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
4.177AlaAla: 4.177 ± 0.0
0.643AlaCys: 0.643 ± 0.0
3.535AlaAsp: 3.535 ± 0.0
3.213AlaGlu: 3.213 ± 0.0
4.177AlaPhe: 4.177 ± 0.0
4.499AlaGly: 4.499 ± 0.0
0.0AlaHis: 0.0 ± 0.0
4.82AlaIle: 4.82 ± 0.0
3.535AlaLys: 3.535 ± 0.0
3.213AlaLeu: 3.213 ± 0.0
3.213AlaMet: 3.213 ± 0.0
4.177AlaAsn: 4.177 ± 0.0
2.571AlaPro: 2.571 ± 0.0
1.928AlaGln: 1.928 ± 0.0
3.213AlaArg: 3.213 ± 0.0
2.249AlaSer: 2.249 ± 0.0
6.105AlaThr: 6.105 ± 0.0
6.748AlaVal: 6.748 ± 0.0
1.285AlaTrp: 1.285 ± 0.0
3.213AlaTyr: 3.213 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
1.607CysAla: 1.607 ± 0.0
0.321CysCys: 0.321 ± 0.0
1.285CysAsp: 1.285 ± 0.0
1.928CysGlu: 1.928 ± 0.0
1.285CysPhe: 1.285 ± 0.0
1.607CysGly: 1.607 ± 0.0
0.321CysHis: 0.321 ± 0.0
1.285CysIle: 1.285 ± 0.0
1.285CysLys: 1.285 ± 0.0
1.285CysLeu: 1.285 ± 0.0
0.321CysMet: 0.321 ± 0.0
0.643CysAsn: 0.643 ± 0.0
0.964CysPro: 0.964 ± 0.0
0.321CysGln: 0.321 ± 0.0
0.321CysArg: 0.321 ± 0.0
0.643CysSer: 0.643 ± 0.0
0.964CysThr: 0.964 ± 0.0
3.535CysVal: 3.535 ± 0.0
0.321CysTrp: 0.321 ± 0.0
0.643CysTyr: 0.643 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.177AspAla: 4.177 ± 0.0
1.607AspCys: 1.607 ± 0.0
2.571AspAsp: 2.571 ± 0.0
3.535AspGlu: 3.535 ± 0.0
2.249AspPhe: 2.249 ± 0.0
3.213AspGly: 3.213 ± 0.0
1.607AspHis: 1.607 ± 0.0
3.535AspIle: 3.535 ± 0.0
3.856AspLys: 3.856 ± 0.0
4.82AspLeu: 4.82 ± 0.0
2.249AspMet: 2.249 ± 0.0
2.249AspAsn: 2.249 ± 0.0
2.249AspPro: 2.249 ± 0.0
1.928AspGln: 1.928 ± 0.0
1.928AspArg: 1.928 ± 0.0
1.928AspSer: 1.928 ± 0.0
4.177AspThr: 4.177 ± 0.0
6.105AspVal: 6.105 ± 0.0
0.643AspTrp: 0.643 ± 0.0
4.499AspTyr: 4.499 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
5.141GluAla: 5.141 ± 0.0
1.928GluCys: 1.928 ± 0.0
4.177GluAsp: 4.177 ± 0.0
5.784GluGlu: 5.784 ± 0.0
2.571GluPhe: 2.571 ± 0.0
3.856GluGly: 3.856 ± 0.0
0.321GluHis: 0.321 ± 0.0
2.249GluIle: 2.249 ± 0.0
5.784GluLys: 5.784 ± 0.0
3.213GluLeu: 3.213 ± 0.0
2.571GluMet: 2.571 ± 0.0
1.928GluAsn: 1.928 ± 0.0
1.607GluPro: 1.607 ± 0.0
1.928GluGln: 1.928 ± 0.0
2.571GluArg: 2.571 ± 0.0
4.499GluSer: 4.499 ± 0.0
4.82GluThr: 4.82 ± 0.0
4.82GluVal: 4.82 ± 0.0
0.964GluTrp: 0.964 ± 0.0
1.607GluTyr: 1.607 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.571PheAla: 2.571 ± 0.0
0.964PheCys: 0.964 ± 0.0
3.213PheAsp: 3.213 ± 0.0
2.892PheGlu: 2.892 ± 0.0
1.607PhePhe: 1.607 ± 0.0
2.892PheGly: 2.892 ± 0.0
1.285PheHis: 1.285 ± 0.0
2.892PheIle: 2.892 ± 0.0
3.856PheLys: 3.856 ± 0.0
2.249PheLeu: 2.249 ± 0.0
0.0PheMet: 0.0 ± 0.0
1.928PheAsn: 1.928 ± 0.0
0.643PhePro: 0.643 ± 0.0
1.607PheGln: 1.607 ± 0.0
2.249PheArg: 2.249 ± 0.0
4.177PheSer: 4.177 ± 0.0
4.82PheThr: 4.82 ± 0.0
2.571PheVal: 2.571 ± 0.0
1.607PheTrp: 1.607 ± 0.0
1.928PheTyr: 1.928 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.213GlyAla: 3.213 ± 0.0
1.928GlyCys: 1.928 ± 0.0
4.499GlyAsp: 4.499 ± 0.0
5.463GlyGlu: 5.463 ± 0.0
2.249GlyPhe: 2.249 ± 0.0
3.535GlyGly: 3.535 ± 0.0
1.285GlyHis: 1.285 ± 0.0
3.213GlyIle: 3.213 ± 0.0
4.177GlyLys: 4.177 ± 0.0
4.82GlyLeu: 4.82 ± 0.0
0.964GlyMet: 0.964 ± 0.0
2.571GlyAsn: 2.571 ± 0.0
1.285GlyPro: 1.285 ± 0.0
2.892GlyGln: 2.892 ± 0.0
3.856GlyArg: 3.856 ± 0.0
5.141GlySer: 5.141 ± 0.0
5.463GlyThr: 5.463 ± 0.0
4.82GlyVal: 4.82 ± 0.0
0.0GlyTrp: 0.0 ± 0.0
1.928GlyTyr: 1.928 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.607HisAla: 1.607 ± 0.0
0.643HisCys: 0.643 ± 0.0
1.607HisAsp: 1.607 ± 0.0
0.964HisGlu: 0.964 ± 0.0
3.535HisPhe: 3.535 ± 0.0
1.285HisGly: 1.285 ± 0.0
0.321HisHis: 0.321 ± 0.0
0.321HisIle: 0.321 ± 0.0
0.643HisLys: 0.643 ± 0.0
1.285HisLeu: 1.285 ± 0.0
0.0HisMet: 0.0 ± 0.0
0.643HisAsn: 0.643 ± 0.0
1.607HisPro: 1.607 ± 0.0
0.321HisGln: 0.321 ± 0.0
0.964HisArg: 0.964 ± 0.0
0.964HisSer: 0.964 ± 0.0
1.607HisThr: 1.607 ± 0.0
1.607HisVal: 1.607 ± 0.0
0.0HisTrp: 0.0 ± 0.0
0.643HisTyr: 0.643 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
4.82IleAla: 4.82 ± 0.0
0.643IleCys: 0.643 ± 0.0
3.213IleAsp: 3.213 ± 0.0
1.285IleGlu: 1.285 ± 0.0
0.643IlePhe: 0.643 ± 0.0
3.535IleGly: 3.535 ± 0.0
0.964IleHis: 0.964 ± 0.0
3.213IleIle: 3.213 ± 0.0
4.82IleLys: 4.82 ± 0.0
3.856IleLeu: 3.856 ± 0.0
2.571IleMet: 2.571 ± 0.0
3.213IleAsn: 3.213 ± 0.0
2.892IlePro: 2.892 ± 0.0
1.928IleGln: 1.928 ± 0.0
2.249IleArg: 2.249 ± 0.0
6.427IleSer: 6.427 ± 0.0
3.535IleThr: 3.535 ± 0.0
4.499IleVal: 4.499 ± 0.0
0.643IleTrp: 0.643 ± 0.0
1.928IleTyr: 1.928 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
4.177LysAla: 4.177 ± 0.0
1.928LysCys: 1.928 ± 0.0
4.82LysAsp: 4.82 ± 0.0
3.856LysGlu: 3.856 ± 0.0
1.285LysPhe: 1.285 ± 0.0
3.213LysGly: 3.213 ± 0.0
1.928LysHis: 1.928 ± 0.0
4.177LysIle: 4.177 ± 0.0
5.784LysLys: 5.784 ± 0.0
5.784LysLeu: 5.784 ± 0.0
1.607LysMet: 1.607 ± 0.0
4.177LysAsn: 4.177 ± 0.0
2.249LysPro: 2.249 ± 0.0
2.249LysGln: 2.249 ± 0.0
3.213LysArg: 3.213 ± 0.0
4.499LysSer: 4.499 ± 0.0
4.499LysThr: 4.499 ± 0.0
5.141LysVal: 5.141 ± 0.0
1.285LysTrp: 1.285 ± 0.0
1.607LysTyr: 1.607 ± 0.0
0.321LysXaa: 0.321 ± 0.0
Leu
6.105LeuAla: 6.105 ± 0.0
1.285LeuCys: 1.285 ± 0.0
4.499LeuAsp: 4.499 ± 0.0
6.427LeuGlu: 6.427 ± 0.0
4.177LeuPhe: 4.177 ± 0.0
5.463LeuGly: 5.463 ± 0.0
2.892LeuHis: 2.892 ± 0.0
3.213LeuIle: 3.213 ± 0.0
4.82LeuLys: 4.82 ± 0.0
7.712LeuLeu: 7.712 ± 0.0
1.928LeuMet: 1.928 ± 0.0
3.535LeuAsn: 3.535 ± 0.0
4.177LeuPro: 4.177 ± 0.0
1.928LeuGln: 1.928 ± 0.0
4.177LeuArg: 4.177 ± 0.0
3.213LeuSer: 3.213 ± 0.0
3.535LeuThr: 3.535 ± 0.0
4.177LeuVal: 4.177 ± 0.0
0.964LeuTrp: 0.964 ± 0.0
2.571LeuTyr: 2.571 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.607MetAla: 1.607 ± 0.0
0.0MetCys: 0.0 ± 0.0
1.607MetAsp: 1.607 ± 0.0
2.249MetGlu: 2.249 ± 0.0
1.285MetPhe: 1.285 ± 0.0
1.928MetGly: 1.928 ± 0.0
0.321MetHis: 0.321 ± 0.0
1.607MetIle: 1.607 ± 0.0
1.607MetLys: 1.607 ± 0.0
2.571MetLeu: 2.571 ± 0.0
1.285MetMet: 1.285 ± 0.0
1.607MetAsn: 1.607 ± 0.0
2.249MetPro: 2.249 ± 0.0
1.928MetGln: 1.928 ± 0.0
1.285MetArg: 1.285 ± 0.0
2.571MetSer: 2.571 ± 0.0
0.643MetThr: 0.643 ± 0.0
3.213MetVal: 3.213 ± 0.0
0.321MetTrp: 0.321 ± 0.0
0.964MetTyr: 0.964 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
5.141AsnAla: 5.141 ± 0.0
0.964AsnCys: 0.964 ± 0.0
1.607AsnAsp: 1.607 ± 0.0
1.285AsnGlu: 1.285 ± 0.0
2.571AsnPhe: 2.571 ± 0.0
3.535AsnGly: 3.535 ± 0.0
0.321AsnHis: 0.321 ± 0.0
2.892AsnIle: 2.892 ± 0.0
5.141AsnLys: 5.141 ± 0.0
3.856AsnLeu: 3.856 ± 0.0
1.285AsnMet: 1.285 ± 0.0
0.964AsnAsn: 0.964 ± 0.0
2.249AsnPro: 2.249 ± 0.0
1.607AsnGln: 1.607 ± 0.0
2.571AsnArg: 2.571 ± 0.0
2.892AsnSer: 2.892 ± 0.0
2.892AsnThr: 2.892 ± 0.0
6.427AsnVal: 6.427 ± 0.0
0.643AsnTrp: 0.643 ± 0.0
1.285AsnTyr: 1.285 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.285ProAla: 1.285 ± 0.0
0.643ProCys: 0.643 ± 0.0
1.928ProAsp: 1.928 ± 0.0
2.249ProGlu: 2.249 ± 0.0
1.928ProPhe: 1.928 ± 0.0
2.249ProGly: 2.249 ± 0.0
0.964ProHis: 0.964 ± 0.0
3.535ProIle: 3.535 ± 0.0
2.249ProLys: 2.249 ± 0.0
3.856ProLeu: 3.856 ± 0.0
0.321ProMet: 0.321 ± 0.0
2.249ProAsn: 2.249 ± 0.0
1.607ProPro: 1.607 ± 0.0
1.285ProGln: 1.285 ± 0.0
1.285ProArg: 1.285 ± 0.0
1.928ProSer: 1.928 ± 0.0
2.571ProThr: 2.571 ± 0.0
4.499ProVal: 4.499 ± 0.0
1.285ProTrp: 1.285 ± 0.0
0.643ProTyr: 0.643 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.856GlnAla: 3.856 ± 0.0
0.964GlnCys: 0.964 ± 0.0
1.928GlnAsp: 1.928 ± 0.0
2.249GlnGlu: 2.249 ± 0.0
0.964GlnPhe: 0.964 ± 0.0
1.928GlnGly: 1.928 ± 0.0
0.964GlnHis: 0.964 ± 0.0
0.964GlnIle: 0.964 ± 0.0
1.285GlnLys: 1.285 ± 0.0
3.213GlnLeu: 3.213 ± 0.0
2.249GlnMet: 2.249 ± 0.0
1.285GlnAsn: 1.285 ± 0.0
0.964GlnPro: 0.964 ± 0.0
0.321GlnGln: 0.321 ± 0.0
1.607GlnArg: 1.607 ± 0.0
2.892GlnSer: 2.892 ± 0.0
0.643GlnThr: 0.643 ± 0.0
1.607GlnVal: 1.607 ± 0.0
0.643GlnTrp: 0.643 ± 0.0
0.0GlnTyr: 0.0 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
1.607ArgAla: 1.607 ± 0.0
0.964ArgCys: 0.964 ± 0.0
3.213ArgAsp: 3.213 ± 0.0
3.213ArgGlu: 3.213 ± 0.0
3.213ArgPhe: 3.213 ± 0.0
2.571ArgGly: 2.571 ± 0.0
0.964ArgHis: 0.964 ± 0.0
2.571ArgIle: 2.571 ± 0.0
1.928ArgLys: 1.928 ± 0.0
3.535ArgLeu: 3.535 ± 0.0
1.607ArgMet: 1.607 ± 0.0
2.571ArgAsn: 2.571 ± 0.0
1.285ArgPro: 1.285 ± 0.0
1.285ArgGln: 1.285 ± 0.0
1.928ArgArg: 1.928 ± 0.0
3.535ArgSer: 3.535 ± 0.0
1.928ArgThr: 1.928 ± 0.0
3.856ArgVal: 3.856 ± 0.0
1.285ArgTrp: 1.285 ± 0.0
1.928ArgTyr: 1.928 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
3.535SerAla: 3.535 ± 0.0
1.285SerCys: 1.285 ± 0.0
4.177SerAsp: 4.177 ± 0.0
5.463SerGlu: 5.463 ± 0.0
3.535SerPhe: 3.535 ± 0.0
5.141SerGly: 5.141 ± 0.0
0.964SerHis: 0.964 ± 0.0
4.177SerIle: 4.177 ± 0.0
4.499SerLys: 4.499 ± 0.0
6.748SerLeu: 6.748 ± 0.0
2.571SerMet: 2.571 ± 0.0
3.213SerAsn: 3.213 ± 0.0
1.607SerPro: 1.607 ± 0.0
1.607SerGln: 1.607 ± 0.0
1.607SerArg: 1.607 ± 0.0
4.499SerSer: 4.499 ± 0.0
3.213SerThr: 3.213 ± 0.0
6.105SerVal: 6.105 ± 0.0
0.964SerTrp: 0.964 ± 0.0
0.643SerTyr: 0.643 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
3.856ThrAla: 3.856 ± 0.0
2.249ThrCys: 2.249 ± 0.0
3.856ThrAsp: 3.856 ± 0.0
2.892ThrGlu: 2.892 ± 0.0
3.535ThrPhe: 3.535 ± 0.0
4.499ThrGly: 4.499 ± 0.0
1.285ThrHis: 1.285 ± 0.0
5.784ThrIle: 5.784 ± 0.0
3.535ThrLys: 3.535 ± 0.0
5.463ThrLeu: 5.463 ± 0.0
1.928ThrMet: 1.928 ± 0.0
4.499ThrAsn: 4.499 ± 0.0
2.249ThrPro: 2.249 ± 0.0
1.285ThrGln: 1.285 ± 0.0
2.249ThrArg: 2.249 ± 0.0
4.82ThrSer: 4.82 ± 0.0
4.499ThrThr: 4.499 ± 0.0
4.499ThrVal: 4.499 ± 0.0
0.321ThrTrp: 0.321 ± 0.0
2.249ThrTyr: 2.249 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
5.141ValAla: 5.141 ± 0.0
1.607ValCys: 1.607 ± 0.0
5.463ValAsp: 5.463 ± 0.0
3.856ValGlu: 3.856 ± 0.0
3.535ValPhe: 3.535 ± 0.0
4.82ValGly: 4.82 ± 0.0
2.571ValHis: 2.571 ± 0.0
5.784ValIle: 5.784 ± 0.0
5.141ValLys: 5.141 ± 0.0
4.499ValLeu: 4.499 ± 0.0
1.607ValMet: 1.607 ± 0.0
6.427ValAsn: 6.427 ± 0.0
4.82ValPro: 4.82 ± 0.0
3.535ValGln: 3.535 ± 0.0
3.856ValArg: 3.856 ± 0.0
5.463ValSer: 5.463 ± 0.0
5.141ValThr: 5.141 ± 0.0
6.427ValVal: 6.427 ± 0.0
2.249ValTrp: 2.249 ± 0.0
2.892ValTyr: 2.892 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.321TrpAla: 0.321 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.964TrpAsp: 0.964 ± 0.0
0.643TrpGlu: 0.643 ± 0.0
0.643TrpPhe: 0.643 ± 0.0
0.964TrpGly: 0.964 ± 0.0
0.964TrpHis: 0.964 ± 0.0
0.0TrpIle: 0.0 ± 0.0
1.285TrpLys: 1.285 ± 0.0
2.249TrpLeu: 2.249 ± 0.0
0.643TrpMet: 0.643 ± 0.0
0.643TrpAsn: 0.643 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.321TrpGln: 0.321 ± 0.0
1.285TrpArg: 1.285 ± 0.0
1.285TrpSer: 1.285 ± 0.0
1.285TrpThr: 1.285 ± 0.0
1.285TrpVal: 1.285 ± 0.0
0.643TrpTrp: 0.643 ± 0.0
0.643TrpTyr: 0.643 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.571TyrAla: 2.571 ± 0.0
0.321TyrCys: 0.321 ± 0.0
0.964TyrAsp: 0.964 ± 0.0
2.892TyrGlu: 2.892 ± 0.0
0.643TyrPhe: 0.643 ± 0.0
2.571TyrGly: 2.571 ± 0.0
0.321TyrHis: 0.321 ± 0.0
0.643TyrIle: 0.643 ± 0.0
2.571TyrLys: 2.571 ± 0.0
2.571TyrLeu: 2.571 ± 0.0
1.607TyrMet: 1.607 ± 0.0
1.607TyrAsn: 1.607 ± 0.0
1.285TyrPro: 1.285 ± 0.0
0.321TyrGln: 0.321 ± 0.0
2.571TyrArg: 2.571 ± 0.0
1.928TyrSer: 1.928 ± 0.0
3.213TyrThr: 3.213 ± 0.0
3.213TyrVal: 3.213 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
0.643TyrTyr: 0.643 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.321XaaPhe: 0.321 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (3113 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski