Elephant endotheliotropic herpesvirus 1A

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Proboscivirus; Elephantid betaherpesvirus 1

Average proteome isoelectric point is 6.85

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 120 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0S1NI02|A0A0S1NI02_ELHV1 Protein E22A OS=Elephant endotheliotropic herpesvirus 1A OX=759753 GN=E22A PE=4 SV=1
MM1 pKa = 7.61ARR3 pKa = 11.84TLYY6 pKa = 10.71LVLGLATLFCVTEE19 pKa = 4.39SYY21 pKa = 10.82PVTNEE26 pKa = 3.82DD27 pKa = 3.54TDD29 pKa = 4.4DD30 pKa = 4.91LEE32 pKa = 4.4TTYY35 pKa = 11.13TSVEE39 pKa = 4.3TNISSSSDD47 pKa = 2.89KK48 pKa = 10.75HH49 pKa = 6.22GKK51 pKa = 10.34LNVTCLAKK59 pKa = 10.61ALPPASNVTWIGLSNIDD76 pKa = 3.66NSTSITNNTDD86 pKa = 2.4GTLTVRR92 pKa = 11.84STLHH96 pKa = 5.92IADD99 pKa = 4.65EE100 pKa = 4.25KK101 pKa = 10.44RR102 pKa = 11.84QVNGSAYY109 pKa = 10.22CRR111 pKa = 11.84VSHH114 pKa = 5.46QVSVTYY120 pKa = 10.43LAAPWNSEE128 pKa = 3.5DD129 pKa = 4.57DD130 pKa = 3.45MGIFGLIMEE139 pKa = 5.14EE140 pKa = 4.35LDD142 pKa = 4.63LSDD145 pKa = 4.56SYY147 pKa = 12.0EE148 pKa = 4.06LVFNDD153 pKa = 4.35GDD155 pKa = 4.47DD156 pKa = 3.86GGEE159 pKa = 3.97DD160 pKa = 5.01DD161 pKa = 6.07EE162 pKa = 6.83YY163 pKa = 11.69DD164 pKa = 4.77DD165 pKa = 5.97DD166 pKa = 6.81DD167 pKa = 4.41EE168 pKa = 7.2GEE170 pKa = 4.63DD171 pKa = 4.02YY172 pKa = 11.5EE173 pKa = 4.61EE174 pKa = 5.15DD175 pKa = 3.53KK176 pKa = 11.58

Molecular weight: 19.36 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|M1RFX5|M1RFX5_ELHV1 ORF-C OS=Elephant endotheliotropic herpesvirus 1A OX=759753 GN=E34 PE=4 SV=1
MM1 pKa = 7.1YY2 pKa = 10.79LLVRR6 pKa = 11.84LFGAGAMIMVVPVSKK21 pKa = 10.7QDD23 pKa = 3.26VVDD26 pKa = 4.19PSRR29 pKa = 11.84RR30 pKa = 11.84SSDD33 pKa = 3.09TLLNRR38 pKa = 11.84LFSIPSVRR46 pKa = 11.84STSPKK51 pKa = 9.45PSHH54 pKa = 6.8ILQNLLFVSCKK65 pKa = 10.29SSLKK69 pKa = 10.23KK70 pKa = 10.01IYY72 pKa = 10.28KK73 pKa = 8.38ITSKK77 pKa = 10.82CEE79 pKa = 3.74RR80 pKa = 11.84KK81 pKa = 10.22KK82 pKa = 10.96LDD84 pKa = 3.65SDD86 pKa = 4.19HH87 pKa = 6.36STQHH91 pKa = 7.04LICTHH96 pKa = 5.97CTGQPRR102 pKa = 11.84CLMSSLKK109 pKa = 10.29RR110 pKa = 11.84YY111 pKa = 9.87VRR113 pKa = 11.84VKK115 pKa = 10.44CKK117 pKa = 10.24KK118 pKa = 9.82

Molecular weight: 13.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

120

0

120

49069

66

2237

408.9

46.29

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.03 ± 0.156

2.688 ± 0.147

5.376 ± 0.171

4.718 ± 0.133

4.742 ± 0.192

4.763 ± 0.221

2.761 ± 0.088

6.544 ± 0.227

4.905 ± 0.174

9.731 ± 0.291

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.519 ± 0.093

5.348 ± 0.174

4.675 ± 0.226

3.395 ± 0.234

5.054 ± 0.219

8.38 ± 0.31

7.373 ± 0.238

6.845 ± 0.151

0.927 ± 0.057

4.225 ± 0.194
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski