Klebsiella phage vB_KpnM_KpS110

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Taipeivirus; Klebsiella virus KpS110

Average proteome isoelectric point is 6.14

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 201 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2K9VAH8|A0A2K9VAH8_9CAUD Uncharacterized protein OS=Klebsiella phage vB_KpnM_KpS110 OX=2079262 GN=kps110_093 PE=4 SV=1
MM1 pKa = 7.68KK2 pKa = 10.23LNKK5 pKa = 9.49ILLVCALAFSTTACSTLLDD24 pKa = 4.01VPDD27 pKa = 4.4LSGPDD32 pKa = 3.58FTQDD36 pKa = 3.04QAQTKK41 pKa = 8.7MDD43 pKa = 4.05DD44 pKa = 3.43MVKK47 pKa = 10.46AHH49 pKa = 7.14AALQGTTPGPIQTVCNYY66 pKa = 10.46DD67 pKa = 3.73DD68 pKa = 4.68SDD70 pKa = 3.91PTTEE74 pKa = 5.24LYY76 pKa = 10.56HH77 pKa = 6.97CSTFVKK83 pKa = 10.55DD84 pKa = 4.05SMVVLYY90 pKa = 10.14GDD92 pKa = 4.43CQADD96 pKa = 3.94GCKK99 pKa = 9.49ATGYY103 pKa = 11.13DD104 pKa = 4.02KK105 pKa = 11.61VEE107 pKa = 3.94EE108 pKa = 4.53DD109 pKa = 3.61KK110 pKa = 11.58

Molecular weight: 11.91 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2K9VAF4|A0A2K9VAF4_9CAUD Uncharacterized protein OS=Klebsiella phage vB_KpnM_KpS110 OX=2079262 GN=kps110_073 PE=4 SV=1
MM1 pKa = 7.79RR2 pKa = 11.84YY3 pKa = 9.1VDD5 pKa = 5.12RR6 pKa = 11.84MLGQNEE12 pKa = 4.03HH13 pKa = 6.68VIGFTRR19 pKa = 11.84PTWWSGFWVYY29 pKa = 9.63FWVAVFLVPTFGISLFFLIPTVIRR53 pKa = 11.84NLTTEE58 pKa = 4.07FAVTNKK64 pKa = 10.01RR65 pKa = 11.84VIFKK69 pKa = 9.78TGFIRR74 pKa = 11.84RR75 pKa = 11.84DD76 pKa = 3.26ADD78 pKa = 3.45EE79 pKa = 4.56LRR81 pKa = 11.84LGKK84 pKa = 10.36VEE86 pKa = 4.17TVKK89 pKa = 10.36VDD91 pKa = 3.01QSITGRR97 pKa = 11.84VLRR100 pKa = 11.84FSTISVIGTGGTRR113 pKa = 11.84LVAKK117 pKa = 10.44GCAKK121 pKa = 10.68GNDD124 pKa = 3.86FRR126 pKa = 11.84RR127 pKa = 11.84VIYY130 pKa = 10.25DD131 pKa = 3.17QLDD134 pKa = 3.3NN135 pKa = 4.17

Molecular weight: 15.53 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

201

0

201

48268

38

1612

240.1

27.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.644 ± 0.193

1.218 ± 0.07

6.487 ± 0.122

6.516 ± 0.192

4.303 ± 0.12

6.655 ± 0.163

1.821 ± 0.105

6.335 ± 0.12

6.491 ± 0.192

7.96 ± 0.14

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.867 ± 0.101

5.248 ± 0.114

3.829 ± 0.123

3.779 ± 0.113

4.887 ± 0.118

6.514 ± 0.188

5.95 ± 0.228

6.998 ± 0.16

1.49 ± 0.07

4.009 ± 0.107
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski