Burkholderia pseudomallei (strain K96243)
Average proteome isoelectric point is 7.03
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 5717 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|Q63UX9|Q63UX9_BURPS Family C40 unassigned peptidase OS=Burkholderia pseudomallei (strain K96243) OX=272560 GN=BPSL1465 PE=3 SV=1
MM1 pKa = 6.34 NTKK4 pKa = 9.21 MLLIRR9 pKa = 11.84 AGKK12 pKa = 7.59 VTPTTLKK19 pKa = 8.23 TLAVAGVDD27 pKa = 3.41 SGDD30 pKa = 3.76 EE31 pKa = 4.14 IVFSSLPANSEE42 pKa = 4.07 LKK44 pKa = 10.29 RR45 pKa = 11.84 DD46 pKa = 3.71 GADD49 pKa = 3.06 LVVRR53 pKa = 11.84 TPDD56 pKa = 3.06 EE57 pKa = 4.25 TFVLKK62 pKa = 10.79 DD63 pKa = 3.45 AAAKK67 pKa = 10.2 LADD70 pKa = 3.66 EE71 pKa = 4.52 SVVVRR76 pKa = 11.84 LGEE79 pKa = 3.9 QPLVVTQAPNEE90 pKa = 4.2 NTHH93 pKa = 6.56 LPAGVQLAGLAAPGQNSAFGLQSFVSAAGEE123 pKa = 3.71 QSLQSDD129 pKa = 4.28 TVSPVAMGAVTTSGIKK145 pKa = 10.2 DD146 pKa = 3.21 AGLSDD151 pKa = 4.02 GGLMGNLRR159 pKa = 11.84 TDD161 pKa = 3.03 VRR163 pKa = 11.84 PTDD166 pKa = 4.68 EE167 pKa = 4.1 IPMYY171 pKa = 8.44 QQKK174 pKa = 8.22 LTQLPLDD181 pKa = 3.8 PRR183 pKa = 11.84 IDD185 pKa = 3.66 VPSRR189 pKa = 11.84 TDD191 pKa = 3.52 FGVNAARR198 pKa = 11.84 YY199 pKa = 7.94 EE200 pKa = 4.06 PAPAAVTAPNFVMSPGDD217 pKa = 3.73 KK218 pKa = 10.91 DD219 pKa = 3.25 PGAGVLQNVTNPQLDD234 pKa = 3.59 GSGPANAVVTAYY246 pKa = 9.72 EE247 pKa = 4.3 VASDD251 pKa = 3.38 GHH253 pKa = 6.88 LISLGTATSDD263 pKa = 3.22 GTGNFAITPNTPLADD278 pKa = 3.78 GTHH281 pKa = 7.21 DD282 pKa = 4.83 IVFQAQKK289 pKa = 11.24 GDD291 pKa = 3.55 LTSPFSAPTSVVIDD305 pKa = 3.65 TKK307 pKa = 11.11 INTPTIGLPASSDD320 pKa = 3.43 SFGAGTVGTNHH331 pKa = 7.59 DD332 pKa = 5.36 DD333 pKa = 3.26 ITNVTNPTLTGTAEE347 pKa = 4.12 AGATVYY353 pKa = 10.9 VSDD356 pKa = 4.45 GSGHH360 pKa = 5.05 TVSTIADD367 pKa = 3.56 SNGNYY372 pKa = 9.61 SVQAPGTLAEE382 pKa = 4.52 GNNVFTVQAVDD393 pKa = 3.27 KK394 pKa = 10.8 AGNTSGTAQQNVTLDD409 pKa = 3.64 TVAATLPAPQLDD421 pKa = 3.86 HH422 pKa = 7.09 GSDD425 pKa = 3.44 TGASNSDD432 pKa = 3.6 GITRR436 pKa = 11.84 ATQPVLTGGGAEE448 pKa = 4.09 PNALVTVYY456 pKa = 11.17 ADD458 pKa = 3.47 GVSIGQATADD468 pKa = 3.73 SLGHH472 pKa = 4.58 YY473 pKa = 7.01 TIHH476 pKa = 7.06 SGVLADD482 pKa = 3.9 GTHH485 pKa = 6.39 QITARR490 pKa = 11.84 QIDD493 pKa = 3.59 IAGNTSALSGAALVTIDD510 pKa = 3.78 TSEE513 pKa = 4.1 PAPANLKK520 pKa = 10.56 LVDD523 pKa = 4.05 DD524 pKa = 4.35 TFGLHH529 pKa = 5.58 TAGTPSDD536 pKa = 4.12 GLTKK540 pKa = 10.51 DD541 pKa = 3.23 SRR543 pKa = 11.84 VTISGTASAGDD554 pKa = 3.95 VVTLMDD560 pKa = 4.32 GATSVGQVTADD571 pKa = 3.47 ASGNWTIQTASLADD585 pKa = 3.82 GTHH588 pKa = 6.45 SLTASAVDD596 pKa = 3.63 LAGNTSPASSTLPVTVDD613 pKa = 4.03 TINPPPALTLSPLSDD628 pKa = 3.32 TFGSGTSGTNHH639 pKa = 7.13 DD640 pKa = 5.17 NITSATLPTFNGTAAAGSYY659 pKa = 8.54 VQLYY663 pKa = 10.14 DD664 pKa = 3.4 VTGGTTVSVGSAVADD679 pKa = 3.71 SSGGWTTTLTSPLSGSASGVSHH701 pKa = 6.44 TLVAVGVDD709 pKa = 3.39 PAGNTSTVSGPDD721 pKa = 3.02 VVVIDD726 pKa = 3.79 NAAAVLPGPTMASASDD742 pKa = 3.63 TGASSSDD749 pKa = 3.44 GITSNTAPVFTGTGAEE765 pKa = 3.97 AGALVTIYY773 pKa = 11.32 ANGTSVGHH781 pKa = 5.99 ATADD785 pKa = 3.05 ASGNYY790 pKa = 8.32 TIQSNALGADD800 pKa = 3.01 GRR802 pKa = 11.84 YY803 pKa = 9.6 QITAQQVDD811 pKa = 3.36 IAGNTSPSSSVTAMTLDD828 pKa = 3.46 TSEE831 pKa = 4.27 PAPVNLHH838 pKa = 6.37 LVDD841 pKa = 3.81 DD842 pKa = 4.44 TFGQGTAGTSSDD854 pKa = 3.88 NLTKK858 pKa = 10.61 DD859 pKa = 3.06 SRR861 pKa = 11.84 VTISGTASAGDD872 pKa = 3.95 VVTLMDD878 pKa = 4.32 GATSVGQVTADD889 pKa = 3.47 ASGNWTIQTASLADD903 pKa = 3.82 GTHH906 pKa = 6.45 SLTASAVDD914 pKa = 3.63 LAGNTSPASSTLPVTVDD931 pKa = 4.03 TINPPPALTLSPLSDD946 pKa = 3.32 TFGSGTSGTNHH957 pKa = 7.13 DD958 pKa = 5.17 NITSATLPTFNGTAAAGSYY977 pKa = 8.54 VQLYY981 pKa = 10.14 DD982 pKa = 3.4 VTGGTTVSMGSAVADD997 pKa = 3.77 SSGGWTTTLTSPLSGSASGVSHH1019 pKa = 6.44 TLVAVGVDD1027 pKa = 3.39 PAGNTSTVSGPDD1039 pKa = 3.02 VVVIDD1044 pKa = 4.07 NAAAALPGPTMASASDD1060 pKa = 3.63 TGASSSDD1067 pKa = 3.44 GITSNTAPVFTGTGAEE1083 pKa = 3.97 AGALVTIYY1091 pKa = 11.32 ANGTSVGHH1099 pKa = 5.99 ATADD1103 pKa = 3.05 ASGNYY1108 pKa = 8.32 TIQSNALGADD1118 pKa = 3.01 GRR1120 pKa = 11.84 YY1121 pKa = 9.6 QITAQQVDD1129 pKa = 3.36 IAGNTSPSSSVTAMTLDD1146 pKa = 3.46 TSEE1149 pKa = 4.27 PAPVNLHH1156 pKa = 6.37 LVDD1159 pKa = 3.81 DD1160 pKa = 4.44 TFGQGTAGTSSDD1172 pKa = 3.88 NLTKK1176 pKa = 10.61 DD1177 pKa = 3.06 SRR1179 pKa = 11.84 VTISGTASAGDD1190 pKa = 3.95 VVTLMDD1196 pKa = 4.32 GATSVGQVTADD1207 pKa = 3.47 ASGNWTIQTASLADD1221 pKa = 3.82 GTHH1224 pKa = 6.45 SLTASAVDD1232 pKa = 3.63 LAGNTSPASSTLPVRR1247 pKa = 11.84 VDD1249 pKa = 3.27 TTTTLPSLTLSSSSDD1264 pKa = 3.17 TFGAGTSGTNHH1275 pKa = 7.09 DD1276 pKa = 5.24 NITSATQPTINGTAEE1291 pKa = 3.94 AGSYY1295 pKa = 8.25 VQLYY1299 pKa = 10.14 DD1300 pKa = 3.4 VTGGTTVSVGEE1311 pKa = 4.31 AVAGSNGTWTTQLVSPLSGSASGVSHH1337 pKa = 6.44 TLVAVGVDD1345 pKa = 3.39 PAGNTSAVSGPDD1357 pKa = 3.07 VLVIDD1362 pKa = 4.82 TSTPSPSTPALTPADD1377 pKa = 3.73 QFNGNPSTTLNARR1390 pKa = 11.84 PTLTGTAEE1398 pKa = 4.08 AGASVSLTDD1407 pKa = 3.15 SGVVVGVGVADD1418 pKa = 3.91 STGHH1422 pKa = 4.46 WTIQTSALFAGGHH1435 pKa = 6.36 TITATAVDD1443 pKa = 3.29 IAGNSNVSGSSTIAVAANVPTPPAPVLITPDD1474 pKa = 3.53 DD1475 pKa = 3.83 TSPIDD1480 pKa = 3.48 STNNDD1485 pKa = 3.47 DD1486 pKa = 3.93 LTRR1489 pKa = 11.84 VTMPHH1494 pKa = 5.41 FTGTTNQGYY1503 pKa = 9.07 LVTLFVDD1510 pKa = 5.33 GVSVGQGVAGGNGSWTIQDD1529 pKa = 3.69 GTSLADD1535 pKa = 3.61 GAHH1538 pKa = 4.95 QVTVRR1543 pKa = 11.84 VSDD1546 pKa = 4.17 PLTGATSAMGPGTTVTIDD1564 pKa = 3.56 TTPPAAPVVQLASYY1578 pKa = 10.39 SDD1580 pKa = 3.77 SFGGGTTGTNSDD1592 pKa = 3.58 HH1593 pKa = 6.31 LTNVTQPVLTGTADD1607 pKa = 3.66 PNTVEE1612 pKa = 4.94 LLLEE1616 pKa = 4.33 GTVTLGTATTNASGAWSFTIQNPLADD1642 pKa = 4.11 GTHH1645 pKa = 6.21 TFAVTSYY1652 pKa = 10.79 DD1653 pKa = 3.25 QANNHH1658 pKa = 5.64 SAATNLVVTVDD1669 pKa = 3.77 TVAPAGTTPTLDD1681 pKa = 3.43 PTSDD1685 pKa = 3.29 SFSPINGIGNNHH1697 pKa = 7.01 DD1698 pKa = 4.44 NITNNLSPVFTGVNQVAGGEE1718 pKa = 4.16 VLLYY1722 pKa = 11.03 DD1723 pKa = 3.95 NGQLIGSATSLGAVGTTWTVSPGNLYY1749 pKa = 10.3 PGTHH1753 pKa = 7.67 FIQSRR1758 pKa = 11.84 YY1759 pKa = 9.23 IDD1761 pKa = 3.62 PAGNTGALSSGVSVTIDD1778 pKa = 3.24 NSEE1781 pKa = 4.0 PAPTNLNLPASADD1794 pKa = 3.62 SGQSNTDD1801 pKa = 3.28 HH1802 pKa = 6.35 ITNVTMPPITGNANYY1817 pKa = 10.07 QDD1819 pKa = 4.3 VVVLTAVNGTTTTTVGTATVGASGSWSIVPGSLADD1854 pKa = 3.56 GTYY1857 pKa = 9.52 TFSAVAVDD1865 pKa = 3.74 VAGNTSNPGVPVQVVVDD1882 pKa = 4.47 THH1884 pKa = 6.45 AAAPSITLGTPYY1896 pKa = 9.91 DD1897 pKa = 3.75 TFGTGTSGTNSDD1909 pKa = 3.62 EE1910 pKa = 4.28 LTRR1913 pKa = 11.84 NTIPYY1918 pKa = 8.52 MYY1920 pKa = 10.57 GVAEE1924 pKa = 4.35 PGARR1928 pKa = 11.84 VTVVEE1933 pKa = 4.27 NGNTIGTVNADD1944 pKa = 3.45 SSTGSYY1950 pKa = 10.18 SIQIPPATVDD1960 pKa = 3.12 GTYY1963 pKa = 9.91 TFQAMQVDD1971 pKa = 4.34 VAGNTSAYY1979 pKa = 9.99 SAPNYY1984 pKa = 8.58 VTIDD1988 pKa = 3.53 TVAATPTLTALTPASDD2004 pKa = 3.56 TFGVGTAGNNHH2015 pKa = 7.14 DD2016 pKa = 4.48 NLTNASTIGIMGTAAEE2032 pKa = 4.67 AGAALDD2038 pKa = 4.72 LYY2040 pKa = 10.68 QITVSGSITTSTSVAHH2056 pKa = 5.22 TTAGAGGSYY2065 pKa = 9.38 TFASFTAPGADD2076 pKa = 2.55 GVYY2079 pKa = 9.54 TYY2081 pKa = 6.99 EE2082 pKa = 4.09 TRR2084 pKa = 11.84 EE2085 pKa = 3.69 IDD2087 pKa = 3.47 PAGNTSPMSPAFNVTIDD2104 pKa = 3.6 RR2105 pKa = 11.84 TVVAPVLTLQNDD2117 pKa = 4.0 TQYY2120 pKa = 11.26 SGSPNWSTGTNSGGAGSANFGTTTDD2145 pKa = 3.99 GLTKK2149 pKa = 9.54 ATQPIVSGTVEE2160 pKa = 4.0 NGSLVVVYY2168 pKa = 10.27 RR2169 pKa = 11.84 DD2170 pKa = 3.61 GVSIGQTTANSAGAWSFTDD2189 pKa = 3.98 PVSQADD2195 pKa = 3.8 GTHH2198 pKa = 7.03 AYY2200 pKa = 9.79 AAYY2203 pKa = 10.04 QVDD2206 pKa = 3.81 RR2207 pKa = 11.84 AGNTSGLGANLAVTVDD2223 pKa = 3.81 TQIEE2227 pKa = 4.14 TARR2230 pKa = 11.84 YY2231 pKa = 8.99 LPAPTPAGASPNYY2244 pKa = 8.63 YY2245 pKa = 10.28 AQIGIPALANGLNAQEE2261 pKa = 4.72 IYY2263 pKa = 10.88 NVDD2266 pKa = 3.49 AAGHH2270 pKa = 5.76 TGVPVYY2276 pKa = 9.53 FQIDD2280 pKa = 3.59 PATAAKK2286 pKa = 10.0 GKK2288 pKa = 10.43 AGDD2291 pKa = 3.57 IVVVDD2296 pKa = 4.74 FTFTYY2301 pKa = 11.22 ANGTGTATVTTEE2313 pKa = 3.53 ASYY2316 pKa = 9.8 TIQAQDD2322 pKa = 3.58 LVVTAGNTPTLTTWVTPNTFFAGNNWLSNYY2352 pKa = 9.39 TGVNQMTVQLQVRR2365 pKa = 11.84 DD2366 pKa = 3.37 QAGNVGFTNTPNVDD2380 pKa = 4.16 TINGAMNASHH2390 pKa = 6.84 VNIDD2394 pKa = 3.46 LWTLATNTGTNTWLGNGVQVYY2415 pKa = 9.83 RR2416 pKa = 11.84 EE2417 pKa = 4.28 LGRR2420 pKa = 11.84 PADD2423 pKa = 3.53 QLGWQVIVGDD2433 pKa = 4.71 DD2434 pKa = 3.64 FNNDD2438 pKa = 3.98 GIHH2441 pKa = 6.99 DD2442 pKa = 4.87 LFMYY2446 pKa = 10.62 APTGGAANNNGRR2458 pKa = 11.84 MYY2460 pKa = 10.85 LVAGQADD2467 pKa = 4.09 TVANGTGFVDD2477 pKa = 4.36 LQNVGTTSDD2486 pKa = 2.66 WSEE2489 pKa = 3.73 NHH2491 pKa = 5.93 GQGAATGGYY2500 pKa = 8.53 VWTGVGNQSYY2510 pKa = 8.69 TNWTSVADD2518 pKa = 3.44 ITGDD2522 pKa = 3.4 GRR2524 pKa = 11.84 GEE2526 pKa = 3.91 LAFDD2530 pKa = 3.35 QTVGPFSQGNPEE2542 pKa = 3.6 IVANILYY2549 pKa = 10.05 SDD2551 pKa = 3.67 AVGPGGFQQALTGLTRR2567 pKa = 11.84 PEE2569 pKa = 3.64 MTQFYY2574 pKa = 10.32 VPVHH2578 pKa = 6.46 GDD2580 pKa = 2.72 SAYY2583 pKa = 9.1 TSRR2586 pKa = 11.84 GVSSNFAAEE2595 pKa = 4.71 FGALATHH2602 pKa = 6.69 YY2603 pKa = 10.53 DD2604 pKa = 3.58 FNGDD2608 pKa = 3.55 GRR2610 pKa = 11.84 GDD2612 pKa = 4.17 LLWADD2617 pKa = 3.93 GGTGNMGNSTTVYY2630 pKa = 10.28 GSVLVGFTPSSAVGLYY2646 pKa = 10.17 DD2647 pKa = 3.84 LRR2649 pKa = 11.84 LPGSSMNQTASKK2661 pKa = 10.66 GFDD2664 pKa = 3.37 VYY2666 pKa = 10.95 STDD2669 pKa = 3.4 PLHH2672 pKa = 6.96 PVGANSALTQAPNNVWAQPIGDD2694 pKa = 3.92 LTGDD2698 pKa = 3.95 GLNDD2702 pKa = 4.16 IIVGQPNGTFNNLATNGRR2720 pKa = 11.84 VAVIFGRR2727 pKa = 11.84 NDD2729 pKa = 3.35 GQGVDD2734 pKa = 4.17 INNLSAGQGFYY2745 pKa = 9.37 ITWNSAVNAGDD2756 pKa = 4.23 VFGQQIKK2763 pKa = 10.84 VMDD2766 pKa = 4.75 LNSDD2770 pKa = 3.56 GYY2772 pKa = 11.32 DD2773 pKa = 3.3 DD2774 pKa = 3.71 VAISIRR2780 pKa = 11.84 CSAAPNTSSNDD2791 pKa = 3.15 SFDD2794 pKa = 3.87 FVIDD2798 pKa = 4.16 GKK2800 pKa = 9.79 WLANYY2805 pKa = 9.03 VHH2807 pKa = 6.98 TNLAAGGAVPTLSIDD2822 pKa = 4.1 AIYY2825 pKa = 10.95 NAMVNHH2831 pKa = 7.14 TATPMGWIDD2840 pKa = 4.54 GDD2842 pKa = 3.72 PTNTNFAGNTSYY2854 pKa = 10.74 PLNVGTPVLKK2864 pKa = 10.01 TDD2866 pKa = 4.34 LNGDD2870 pKa = 4.32 GYY2872 pKa = 11.24 QDD2874 pKa = 3.29 TVIRR2878 pKa = 11.84 NGTQYY2883 pKa = 10.93 YY2884 pKa = 8.29 VLWGSPDD2891 pKa = 3.39 YY2892 pKa = 11.06 HH2893 pKa = 8.11 AGTDD2897 pKa = 3.63 TNYY2900 pKa = 8.58 GTTFFNQPNHH2910 pKa = 7.04 LSLLNNNVGGAPVQFADD2927 pKa = 4.59 INGDD2931 pKa = 3.89 GLWDD2935 pKa = 3.66 MMISQPGNATDD2946 pKa = 3.81 GTNGGLVEE2954 pKa = 4.13 VVYY2957 pKa = 10.36 GVNSQSGSAPGSPLPFASSYY2977 pKa = 8.55 TNSWTAGADD2986 pKa = 3.42 TVTGSSGRR2994 pKa = 11.84 DD2995 pKa = 3.41 MLNGGAGNDD3004 pKa = 3.82 TIVGNGGVDD3013 pKa = 3.44 VLEE3016 pKa = 4.84 GGGGNDD3022 pKa = 3.12 MLVVNGDD3029 pKa = 3.97 NIAHH3033 pKa = 6.31 FTTPGSYY3040 pKa = 8.74 WDD3042 pKa = 3.91 GGIMMGGEE3050 pKa = 4.11 INTLQFDD3057 pKa = 4.55 ANNTANATLDD3067 pKa = 3.6 LTQVSVGNNLSAHH3080 pKa = 5.9 LHH3082 pKa = 5.29 NIEE3085 pKa = 5.01 RR3086 pKa = 11.84 FDD3088 pKa = 4.81 LNGNGNMLKK3097 pKa = 10.19 FDD3099 pKa = 4.35 LRR3101 pKa = 11.84 SVLDD3105 pKa = 3.77 TSAMGVFLDD3114 pKa = 4.64 GGSSGEE3120 pKa = 4.23 TWSGSTWDD3128 pKa = 3.55 PGYY3131 pKa = 9.6 TGSHH3135 pKa = 6.4 GNRR3138 pKa = 11.84 TTPLGPNVPMKK3149 pKa = 10.51 QWVIDD3154 pKa = 3.96 GNATNTLDD3162 pKa = 4.65 FEE3164 pKa = 5.45 PFTQMAQTGASTGLTGNWALVGHH3187 pKa = 5.6 VTHH3190 pKa = 7.01 NDD3192 pKa = 3.01 VHH3194 pKa = 6.53 GVSQNYY3200 pKa = 9.95 DD3201 pKa = 2.68 IYY3203 pKa = 11.2 EE3204 pKa = 3.95 FSGQNAQIIVNHH3216 pKa = 6.64 NIHH3219 pKa = 6.23 LTHH3222 pKa = 6.95 AGSGTTLL3229 pKa = 3.21
Molecular weight: 325.44 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.692
IPC2_protein 3.821
IPC_protein 3.91
Toseland 3.656
ProMoST 4.088
Dawson 3.923
Bjellqvist 4.062
Wikipedia 3.884
Rodwell 3.719
Grimsley 3.567
Solomon 3.91
Lehninger 3.872
Nozaki 4.024
DTASelect 4.355
Thurlkill 3.719
EMBOSS 3.884
Sillero 4.037
Patrickios 1.189
IPC_peptide 3.91
IPC2_peptide 4.012
IPC2.peptide.svr19 3.893
Protein with the highest isoelectric point:
>tr|Q63YI6|Q63YI6_BURPS Histidine kinase OS=Burkholderia pseudomallei (strain K96243) OX=272560 GN=BPSL0201 PE=4 SV=1
MM1 pKa = 7.98 PFRR4 pKa = 11.84 LTSRR8 pKa = 11.84 LHH10 pKa = 5.6 RR11 pKa = 11.84 TPKK14 pKa = 9.79 SAPSAPHH21 pKa = 6.32 RR22 pKa = 11.84 IVRR25 pKa = 11.84 ALRR28 pKa = 11.84 HH29 pKa = 5.13 HH30 pKa = 5.98 SARR33 pKa = 11.84 SSVLAEE39 pKa = 4.28 RR40 pKa = 11.84 ARR42 pKa = 11.84 QHH44 pKa = 5.68 QPRR47 pKa = 11.84 LDD49 pKa = 3.5 GLRR52 pKa = 11.84 AWLHH56 pKa = 6.01 AFLSLMSAHH65 pKa = 6.47 AAARR69 pKa = 11.84 RR70 pKa = 11.84 TALRR74 pKa = 11.84 SLLQKK79 pKa = 10.06 PALRR83 pKa = 11.84 LRR85 pKa = 11.84 APSLHH90 pKa = 6.42 RR91 pKa = 11.84 ASVAPRR97 pKa = 11.84 RR98 pKa = 11.84 INRR101 pKa = 11.84 PRR103 pKa = 11.84 RR104 pKa = 11.84 LATSTGWFVFAARR117 pKa = 4.25
Molecular weight: 13.32 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.479
IPC2_protein 11.052
IPC_protein 12.661
Toseland 12.822
ProMoST 13.32
Dawson 12.822
Bjellqvist 12.822
Wikipedia 13.305
Rodwell 12.369
Grimsley 12.866
Solomon 13.32
Lehninger 13.217
Nozaki 12.822
DTASelect 12.822
Thurlkill 12.822
EMBOSS 13.32
Sillero 12.822
Patrickios 12.091
IPC_peptide 13.334
IPC2_peptide 12.31
IPC2.peptide.svr19 9.152
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
5717
0
5717
1988316
30
6274
347.8
37.54
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
14.511 ± 0.056
0.965 ± 0.01
5.696 ± 0.029
4.79 ± 0.029
3.576 ± 0.022
8.327 ± 0.035
2.334 ± 0.017
4.309 ± 0.022
2.72 ± 0.028
10.085 ± 0.037
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.138 ± 0.015
2.551 ± 0.024
5.33 ± 0.026
3.206 ± 0.021
7.769 ± 0.042
5.305 ± 0.046
5.085 ± 0.034
7.493 ± 0.027
1.37 ± 0.012
2.44 ± 0.016
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here