Odonata-associated circular virus-3

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 7.35

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UI27|A0A0B4UI27_9VIRU ATP-dependent helicase Rep OS=Odonata-associated circular virus-3 OX=1592123 PE=3 SV=1
MM1 pKa = 7.7AEE3 pKa = 5.09LIRR6 pKa = 11.84TEE8 pKa = 4.1NPKK11 pKa = 10.36KK12 pKa = 10.06RR13 pKa = 11.84DD14 pKa = 3.72RR15 pKa = 11.84NWCFTINNWTPEE27 pKa = 4.1EE28 pKa = 3.84QDD30 pKa = 3.16QLRR33 pKa = 11.84TLVPADD39 pKa = 3.27AEE41 pKa = 4.55YY42 pKa = 10.41IVWGRR47 pKa = 11.84EE48 pKa = 3.65EE49 pKa = 4.73GDD51 pKa = 3.85AEE53 pKa = 4.42HH54 pKa = 6.72TPHH57 pKa = 6.64LQGFVKK63 pKa = 10.01TKK65 pKa = 10.94NEE67 pKa = 3.57VSMKK71 pKa = 10.14KK72 pKa = 10.14LKK74 pKa = 10.68KK75 pKa = 10.31LGFARR80 pKa = 11.84AHH82 pKa = 5.94LEE84 pKa = 4.0IMGGTHH90 pKa = 6.99AAAIAYY96 pKa = 7.5CKK98 pKa = 10.21KK99 pKa = 10.67DD100 pKa = 3.6GDD102 pKa = 3.65WEE104 pKa = 4.5EE105 pKa = 4.73YY106 pKa = 10.75GNQPLQGYY114 pKa = 7.62RR115 pKa = 11.84TDD117 pKa = 4.16LVAFKK122 pKa = 10.61HH123 pKa = 5.52QIEE126 pKa = 4.34LGKK129 pKa = 10.55RR130 pKa = 11.84PLEE133 pKa = 4.04VAEE136 pKa = 4.07QDD138 pKa = 3.79SHH140 pKa = 7.51FGAYY144 pKa = 8.69VKK146 pKa = 8.61YY147 pKa = 10.48HH148 pKa = 6.7RR149 pKa = 11.84GFDD152 pKa = 3.35NYY154 pKa = 9.78HH155 pKa = 5.67AHH157 pKa = 5.56IQEE160 pKa = 4.37SKK162 pKa = 10.62RR163 pKa = 11.84LRR165 pKa = 11.84TGFKK169 pKa = 9.92PPQVYY174 pKa = 10.27LRR176 pKa = 11.84VGDD179 pKa = 3.97PGVGKK184 pKa = 10.27SRR186 pKa = 11.84HH187 pKa = 5.6VYY189 pKa = 8.07DD190 pKa = 3.26THH192 pKa = 8.4GYY194 pKa = 7.39EE195 pKa = 5.77HH196 pKa = 7.16VYY198 pKa = 8.82TWEE201 pKa = 3.81SDD203 pKa = 2.98MGNFFDD209 pKa = 5.3GYY211 pKa = 9.06RR212 pKa = 11.84GQSVVHH218 pKa = 6.54FEE220 pKa = 4.26DD221 pKa = 3.64VQKK224 pKa = 11.34GQLPPLAKK232 pKa = 10.4FKK234 pKa = 10.81RR235 pKa = 11.84LLDD238 pKa = 3.5GHH240 pKa = 6.18PVRR243 pKa = 11.84VSVKK247 pKa = 9.63GSSQIWSPDD256 pKa = 3.34YY257 pKa = 10.72IYY259 pKa = 10.45ISSNHH264 pKa = 6.3KK265 pKa = 8.9PCTWYY270 pKa = 10.09DD271 pKa = 3.81YY272 pKa = 11.63KK273 pKa = 11.42DD274 pKa = 3.44GDD276 pKa = 3.94YY277 pKa = 10.49EE278 pKa = 6.36AIMSRR283 pKa = 11.84IKK285 pKa = 10.08EE286 pKa = 3.87ARR288 pKa = 11.84VVYY291 pKa = 10.15KK292 pKa = 10.55DD293 pKa = 3.55RR294 pKa = 11.84PDD296 pKa = 3.62EE297 pKa = 4.15VFHH300 pKa = 6.11TSSRR304 pKa = 11.84FDD306 pKa = 2.88AWFQAQEE313 pKa = 4.11DD314 pKa = 3.91QQ315 pKa = 4.4

Molecular weight: 36.72 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UI27|A0A0B4UI27_9VIRU ATP-dependent helicase Rep OS=Odonata-associated circular virus-3 OX=1592123 PE=3 SV=1
MM1 pKa = 7.9LFGQKK6 pKa = 8.2EE7 pKa = 3.89DD8 pKa = 3.76RR9 pKa = 11.84MNVTYY14 pKa = 10.14RR15 pKa = 11.84VVVLKK20 pKa = 9.67CTEE23 pKa = 4.04DD24 pKa = 3.48QQPSSTVDD32 pKa = 3.44DD33 pKa = 5.04LIEE36 pKa = 4.27NVTGNILLDD45 pKa = 3.35GTNRR49 pKa = 11.84DD50 pKa = 3.41RR51 pKa = 11.84GNIVYY56 pKa = 10.06QKK58 pKa = 10.06YY59 pKa = 9.42IKK61 pKa = 9.5KK62 pKa = 8.92TITPQLAPAGQEE74 pKa = 3.74RR75 pKa = 11.84EE76 pKa = 4.05LTFTHH81 pKa = 6.8KK82 pKa = 10.47FWIPYY87 pKa = 9.21KK88 pKa = 10.61KK89 pKa = 10.43LIKK92 pKa = 10.49FSGNNGQQFSGPKK105 pKa = 9.44LYY107 pKa = 10.73LYY109 pKa = 10.6VFAYY113 pKa = 10.12DD114 pKa = 3.75AYY116 pKa = 9.83GTAITDD122 pKa = 3.93NIAYY126 pKa = 9.03YY127 pKa = 9.78QMWHH131 pKa = 6.15KK132 pKa = 10.66LYY134 pKa = 11.01YY135 pKa = 9.79RR136 pKa = 11.84DD137 pKa = 3.68PP138 pKa = 4.83

Molecular weight: 16.14 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

453

138

315

226.5

26.43

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.519 ± 0.614

0.883 ± 0.083

7.064 ± 0.284

6.181 ± 1.342

4.415 ± 0.035

7.285 ± 0.4

3.974 ± 1.324

4.636 ± 0.989

7.726 ± 0.128

6.181 ± 0.939

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.766 ± 0.214

3.753 ± 1.072

4.636 ± 0.151

5.519 ± 0.526

5.74 ± 0.73

4.194 ± 0.68

5.298 ± 1.402

6.402 ± 0.317

2.208 ± 0.398

6.623 ± 1.087
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski