Taenia asiatica (Asian tapeworm)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Spiralia; Lophotrochozoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Taenia

Average proteome isoelectric point is 6.72

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10244 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0R3VYN1|A0A0R3VYN1_TAEAS Uncharacterized protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS2526 PE=4 SV=1
MM1 pKa = 7.16GRR3 pKa = 11.84SHH5 pKa = 6.88TALEE9 pKa = 4.49DD10 pKa = 3.37GRR12 pKa = 11.84AGGGKK17 pKa = 9.48EE18 pKa = 3.98CDD20 pKa = 3.17ATSILGISPGYY31 pKa = 10.29DD32 pKa = 3.32YY33 pKa = 11.51RR34 pKa = 11.84LLWYY38 pKa = 9.57PSDD41 pKa = 3.69AATAAATAEE50 pKa = 3.84IAVLNEE56 pKa = 3.72AVGTVDD62 pKa = 6.48LIDD65 pKa = 5.82DD66 pKa = 4.37EE67 pKa = 7.63DD68 pKa = 6.01DD69 pKa = 4.32DD70 pKa = 4.43FVPAGGEE77 pKa = 3.9LLADD81 pKa = 4.38DD82 pKa = 4.22EE83 pKa = 4.91TVAIYY88 pKa = 10.21HH89 pKa = 6.82HH90 pKa = 7.36DD91 pKa = 3.44PSAFGNVVDD100 pKa = 4.38EE101 pKa = 4.65GEE103 pKa = 4.41EE104 pKa = 4.06EE105 pKa = 4.59GEE107 pKa = 4.39LYY109 pKa = 10.88

Molecular weight: 11.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0R3W0A2|A0A0R3W0A2_TAEAS Uncharacterized protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS3097 PE=4 SV=1
MM1 pKa = 6.87IRR3 pKa = 11.84KK4 pKa = 9.25RR5 pKa = 11.84KK6 pKa = 9.64VGSTTAKK13 pKa = 9.49GLHH16 pKa = 6.16RR17 pKa = 11.84RR18 pKa = 11.84IQGRR22 pKa = 11.84KK23 pKa = 7.22VKK25 pKa = 10.4AKK27 pKa = 10.02SSQRR31 pKa = 11.84HH32 pKa = 4.41PRR34 pKa = 11.84VV35 pKa = 3.06

Molecular weight: 4.05 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10244

0

10244

4944211

29

6932

482.6

53.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.606 ± 0.021

2.113 ± 0.017

5.051 ± 0.018

6.286 ± 0.03

3.96 ± 0.018

5.88 ± 0.035

2.469 ± 0.01

4.823 ± 0.017

4.693 ± 0.022

9.824 ± 0.03

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.136 ± 0.01

3.932 ± 0.012

5.829 ± 0.028

3.989 ± 0.02

6.262 ± 0.018

9.097 ± 0.031

5.871 ± 0.017

6.484 ± 0.016

1.085 ± 0.007

2.607 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski