Bovine adenovirus 6

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Atadenovirus; Bovine atadenovirus E

Average proteome isoelectric point is 7.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 30 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K9MPD6|K9MPD6_9ADEN ORF2 OS=Bovine adenovirus 6 OX=111167 PE=4 SV=1
MM1 pKa = 6.99NQLTRR6 pKa = 11.84TFMGAAEE13 pKa = 4.19LVSYY17 pKa = 7.89FTDD20 pKa = 3.14INTNQYY26 pKa = 11.17AIYY29 pKa = 10.24CIATSKK35 pKa = 10.69SFNYY39 pKa = 7.98WAKK42 pKa = 10.71GPFRR46 pKa = 11.84MALRR50 pKa = 11.84FIGDD54 pKa = 3.32TTVYY58 pKa = 10.94VLAQKK63 pKa = 10.81DD64 pKa = 3.93LFPEE68 pKa = 4.39FDD70 pKa = 4.16ALDD73 pKa = 3.72FLKK76 pKa = 10.23WANFSNMAIGFFPVEE91 pKa = 4.01WEE93 pKa = 3.94LLINSLVDD101 pKa = 3.67RR102 pKa = 11.84PMLTAEE108 pKa = 4.31VVLIPGDD115 pKa = 3.55VRR117 pKa = 11.84HH118 pKa = 6.12EE119 pKa = 3.82SWEE122 pKa = 3.84FFKK125 pKa = 11.09YY126 pKa = 9.72YY127 pKa = 8.86WEE129 pKa = 4.33NYY131 pKa = 8.8FPYY134 pKa = 10.4FPIAPDD140 pKa = 3.33WEE142 pKa = 4.3

Molecular weight: 16.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|K9MPD6|K9MPD6_9ADEN ORF2 OS=Bovine adenovirus 6 OX=111167 PE=4 SV=1
MM1 pKa = 7.17KK2 pKa = 7.71TTSGKK7 pKa = 10.75AKK9 pKa = 10.33VKK11 pKa = 10.24LAMSRR16 pKa = 11.84LVRR19 pKa = 11.84YY20 pKa = 9.57KK21 pKa = 10.56KK22 pKa = 10.26ILIQISSGSNDD33 pKa = 2.66TRR35 pKa = 11.84VPPEE39 pKa = 3.77SYY41 pKa = 8.75KK42 pKa = 10.35TIKK45 pKa = 10.14KK46 pKa = 9.97SRR48 pKa = 11.84STTAQKK54 pKa = 10.57KK55 pKa = 7.26QANKK59 pKa = 10.25EE60 pKa = 4.16KK61 pKa = 10.65IFF63 pKa = 3.84

Molecular weight: 7.13 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

30

0

30

8859

54

1073

295.3

33.8

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.407 ± 0.378

2.37 ± 0.51

4.651 ± 0.213

5.655 ± 0.454

5.294 ± 0.26

4.933 ± 0.377

2.246 ± 0.25

5.915 ± 0.27

6.581 ± 0.754

10.08 ± 0.53

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.133 ± 0.188

6.344 ± 0.422

5.317 ± 0.311

4.459 ± 0.27

4.707 ± 0.451

7.157 ± 0.296

6.05 ± 0.409

4.967 ± 0.346

1.456 ± 0.146

4.278 ± 0.345
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski