Janthinobacterium sp. HH01

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium; unclassified Janthinobacterium

Average proteome isoelectric point is 6.72

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5974 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|L9PM13|L9PM13_9BURK Thiazole synthase OS=Janthinobacterium sp. HH01 OX=1198452 GN=thiG PE=3 SV=1
MM1 pKa = 6.34YY2 pKa = 7.89TALFTPAANVSGLASVTVTGGSYY25 pKa = 10.71TDD27 pKa = 3.95LLGNQGGAAVTPVIAVDD44 pKa = 3.57TRR46 pKa = 11.84PPTLAITSDD55 pKa = 3.66LAAVHH60 pKa = 6.59IGDD63 pKa = 3.82TATVSFTFSEE73 pKa = 4.68LPVGFAAGDD82 pKa = 3.33ITTTGGALSGFGVTANPLVYY102 pKa = 9.54TAIFTPAAGVASGAASISVAGGSYY126 pKa = 10.62FDD128 pKa = 4.4LAGNSGAAGATPSIAIDD145 pKa = 3.46TLAPTVTVGGVAFSADD161 pKa = 3.41TGASASDD168 pKa = 3.52LVTRR172 pKa = 11.84SAAQTVSGTLSAALLAGEE190 pKa = 4.49VVQVSLDD197 pKa = 4.04HH198 pKa = 5.91GQSWQNASGGAGSASWSLAGVTLAGSDD225 pKa = 3.61TLQVRR230 pKa = 11.84VNDD233 pKa = 3.63AAGNHH238 pKa = 5.71GAAFSAAYY246 pKa = 10.36VLDD249 pKa = 3.63ATAPTVLVASDD260 pKa = 4.6LGALNAGQQAHH271 pKa = 5.45LTFTFSEE278 pKa = 4.7APSGLTLASLSATGGAVSALAATANPLVYY307 pKa = 9.44TALFTPAAGQAGVSASVAVNAGGYY331 pKa = 8.27TDD333 pKa = 4.46LAGNGGQSGASLPIVINSALPSVLITSSAAALKK366 pKa = 10.66SGEE369 pKa = 4.11TALISFTFSTPPTGFTAADD388 pKa = 3.36IAVSAGTGALSGFAATANPLVYY410 pKa = 9.44TALFTPAAGQAAASAAVSVAGGSYY434 pKa = 10.67TDD436 pKa = 3.28VFGNNGGGGSSPSIAIDD453 pKa = 3.31TLAPTVSISSSVAGVKK469 pKa = 9.79IGEE472 pKa = 4.34TAVITFTFSEE482 pKa = 4.47QPLGFTAGDD491 pKa = 3.71VVTTGGALSNLAVSADD507 pKa = 3.66PLVYY511 pKa = 9.43TALFTPTAGLQSTAASVSIGAGAFVDD537 pKa = 4.29LAGNGATAGASPSLAVDD554 pKa = 3.75TLAPSAVANTVLFSADD570 pKa = 3.44SGVSATDD577 pKa = 3.36LVTRR581 pKa = 11.84TAAQTISGTLATALGAGEE599 pKa = 4.18VVEE602 pKa = 4.71VSLNNGASWSAATAGAGNSWTLAGQTLAGSNTLQVRR638 pKa = 11.84VSDD641 pKa = 3.54AAGNHH646 pKa = 5.46GAAFSTAYY654 pKa = 10.83VLDD657 pKa = 3.76NTAPTAAISSSAAALKK673 pKa = 10.67AGEE676 pKa = 4.26TATLTFTFSEE686 pKa = 4.68APSGLGAGSVTVSGGVLGAFTATANPLVYY715 pKa = 9.36TALFTPTAGVDD726 pKa = 3.3GGSAGIALNAGGYY739 pKa = 10.0SDD741 pKa = 3.7TAGNSGGGYY750 pKa = 6.57TLPAIAVDD758 pKa = 3.9TQAPSIAGASVALSADD774 pKa = 3.51SGVAADD780 pKa = 5.73LITNIAAQTLSGTLNGNLSAGDD802 pKa = 3.8TVEE805 pKa = 4.28VSLDD809 pKa = 3.49NGASWSAAAGAVGTAAWTLAGQTLTAGAGHH839 pKa = 5.41QVQVRR844 pKa = 11.84VSDD847 pKa = 3.39AAGNHH852 pKa = 5.76GAVASSAYY860 pKa = 10.69VLDD863 pKa = 3.93QSAPTLQISSSKK875 pKa = 9.55TVLNSAEE882 pKa = 4.28TATLTFTFSEE892 pKa = 4.73APQGFTAGAIAATGGAVSGFAATGGAVSGFAATANPLVYY931 pKa = 9.46TAVFTPTAGQAAGVGAVSVAAGAYY955 pKa = 8.26TDD957 pKa = 3.74AAGNSGLAGAGPAISYY973 pKa = 7.82ATVAPGVAISSDD985 pKa = 3.55VSALHH990 pKa = 6.86AGQTAIISFKK1000 pKa = 10.78FSVPPLGFTASDD1012 pKa = 3.33VSTSNGTLGALTATADD1028 pKa = 3.82PLLYY1032 pKa = 9.95TAVFTPAANLAGGGGGVSIGAGLFVDD1058 pKa = 4.76GLGNAGSAAAMAPISIDD1075 pKa = 3.18TLAPTLAITSGAAALNSGATSLITFTFSEE1104 pKa = 4.65APPAFSLGDD1113 pKa = 3.18ITVANGTLANLVQSANPLVYY1133 pKa = 9.48TAVFTPGANIAAGAATIAVIGGAYY1157 pKa = 8.73TDD1159 pKa = 3.86LAGNGGGAAPTPSISIDD1176 pKa = 3.27TLAPTIAGASLLFSADD1192 pKa = 3.35TGSSNTDD1199 pKa = 4.19LITRR1203 pKa = 11.84TAAQTIAGTVNGLLAAGDD1221 pKa = 3.9VVEE1224 pKa = 4.67VSFDD1228 pKa = 3.63SGASWVGASAAAGGSSWVLAGQTLGGSGTLQVRR1261 pKa = 11.84VSDD1264 pKa = 3.86ANGNHH1269 pKa = 5.87GAVYY1273 pKa = 10.46ARR1275 pKa = 11.84AYY1277 pKa = 10.79VLDD1280 pKa = 3.87TTAPTVAISSDD1291 pKa = 3.2TATLRR1296 pKa = 11.84NGQAATISFTFSEE1309 pKa = 4.83APAGFTLGDD1318 pKa = 4.54LIATGGTLSGFAATANPLVYY1338 pKa = 9.71TVLLTPTPGLAGAAGVTLGNGLYY1361 pKa = 10.54ADD1363 pKa = 3.98AAGNSGSGAGSPAISVDD1380 pKa = 3.99TIAPTLAIAASSAALKK1396 pKa = 10.93AGDD1399 pKa = 3.58TAVITFTFSDD1409 pKa = 3.83APAAFTLADD1418 pKa = 3.48VSASHH1423 pKa = 6.21GTLSALAAGPDD1434 pKa = 3.58PRR1436 pKa = 11.84VYY1438 pKa = 10.06TAVFTPDD1445 pKa = 3.25AGTAAASAVVSVAGSVYY1462 pKa = 11.04ADD1464 pKa = 3.18AAGNTGSSVSSGAIAIDD1481 pKa = 3.44TLAPTTSGATVVFSADD1497 pKa = 3.4YY1498 pKa = 9.98GASGSDD1504 pKa = 3.19LVTNAVGQVISGTLDD1519 pKa = 3.07APLAAGEE1526 pKa = 4.07QVQVSLDD1533 pKa = 3.73NGASWLNAVAAAGLSSWALAPQLLNGSGTLQVRR1566 pKa = 11.84VADD1569 pKa = 3.67AAGNHH1574 pKa = 5.87GPAFSAGYY1582 pKa = 10.32VLDD1585 pKa = 4.33LVAPAMTVTSSAAALKK1601 pKa = 10.71AGDD1604 pKa = 4.03SATLTFTFSEE1614 pKa = 4.7APTGFTQADD1623 pKa = 3.93LVALNGTLSGFTPTANPLVYY1643 pKa = 9.83TVVLTPAAGLGGVSAGVTLAAGLYY1667 pKa = 9.4TDD1669 pKa = 3.91VAGNPGAAAASPLVAIDD1686 pKa = 3.7TQPPTVAITTSATQLKK1702 pKa = 9.63IGEE1705 pKa = 4.52LATITFTFNEE1715 pKa = 4.26APLGFTAGDD1724 pKa = 3.64VAVTGGSLSGFGLTANPLVYY1744 pKa = 8.02TTLFTPTPGVAGGTASIAIGAGDD1767 pKa = 4.0YY1768 pKa = 11.12LDD1770 pKa = 4.93AAGNPGLAAAAPAIQFSTLAPATGGASVSFSADD1803 pKa = 2.37TGVFNNDD1810 pKa = 3.31LVTSSALQTINGTLDD1825 pKa = 3.0ANLAVGEE1832 pKa = 4.1AVEE1835 pKa = 4.3VSLDD1839 pKa = 3.66NGASWSTALAATGSPAWSLGPLVLGGSGVLQVRR1872 pKa = 11.84VTDD1875 pKa = 3.55AAGNHH1880 pKa = 5.75GAASASAYY1888 pKa = 10.75VLDD1891 pKa = 4.05TGAPGVAISADD1902 pKa = 3.44AAALKK1907 pKa = 10.76AGDD1910 pKa = 3.99SATLSFTFTEE1920 pKa = 4.8APHH1923 pKa = 6.7GFTTADD1929 pKa = 3.28VVAVGGIKK1937 pKa = 10.41GALTATANPLVYY1949 pKa = 10.09TMSYY1953 pKa = 9.3TPTAGFSGVGGVTLTAASYY1972 pKa = 10.77TDD1974 pKa = 3.92LAGNPGAGAAGPALSVDD1991 pKa = 3.78AQPPTLSITSSSTALKK2007 pKa = 10.68AGDD2010 pKa = 3.87SATLTFTFSEE2020 pKa = 4.63APLGFAAGDD2029 pKa = 3.51ITVSGGTIGGFSATANPLVYY2049 pKa = 9.46TAVFTPTPGTAAGSAVIAVASGVYY2073 pKa = 10.18SDD2075 pKa = 4.12AAGNGGASGSAPAIVIDD2092 pKa = 3.96TLAPLAAVGGAIAFSTDD2109 pKa = 2.86TGISNNDD2116 pKa = 4.09LITSVAAQTVSGTLSAPLAAGEE2138 pKa = 4.26TVQVSFDD2145 pKa = 4.38NGASWQAAAVSGTGWSAGVTLTGSGVMRR2173 pKa = 11.84LYY2175 pKa = 11.23VSDD2178 pKa = 3.56AAGNHH2183 pKa = 5.49SPEE2186 pKa = 3.85IVQAYY2191 pKa = 9.73QYY2193 pKa = 10.87DD2194 pKa = 3.91ATPPTVAITASAAVANGMAPTTITFSFSEE2223 pKa = 4.42APQGFTAADD2232 pKa = 3.71LTVSGGTLGAVTATANPLVYY2252 pKa = 9.61TVQFTPTPGQASGIATITLTGGGYY2276 pKa = 10.14VDD2278 pKa = 3.89AAGNNGAGNALPALSFDD2295 pKa = 3.97TMPPAAAAAGAQFSSDD2311 pKa = 3.19SGTPGDD2317 pKa = 4.65MITNNPSQTLTGTLSAPLAAGDD2339 pKa = 3.99VVQVSLDD2346 pKa = 4.13DD2347 pKa = 4.06GVNWNIATVSGTTWTLAGRR2366 pKa = 11.84TLQGSSRR2373 pKa = 11.84MVVRR2377 pKa = 11.84VSDD2380 pKa = 3.49AAGNVSTPMVMPYY2393 pKa = 10.69VLDD2396 pKa = 3.79TQAPTVTITSSVTQLGEE2413 pKa = 4.14GGSAQITLTLSDD2425 pKa = 4.4PGVLTLADD2433 pKa = 3.41IGVSGGTLSNLSGGGTVYY2451 pKa = 10.62TVMLTPPPFSVTPITVSVAGHH2472 pKa = 5.74VFSDD2476 pKa = 3.48AAGNASAAAAPLQLGVNTFPTPISGTPSTVDD2507 pKa = 3.06GVQIMTQTGIDD2518 pKa = 3.48ARR2520 pKa = 11.84TGVATRR2526 pKa = 11.84TVTVPIISDD2535 pKa = 3.51TRR2537 pKa = 11.84SEE2539 pKa = 4.18DD2540 pKa = 2.99HH2541 pKa = 6.3STPHH2545 pKa = 6.88ANLADD2550 pKa = 3.68IPLGLAAAGATPGTSLVVSLPVGVGLEE2577 pKa = 3.94AAGPSVLLGGATALTDD2593 pKa = 4.62LIGRR2597 pKa = 11.84IDD2599 pKa = 3.78DD2600 pKa = 3.84HH2601 pKa = 6.14TLQGQATRR2609 pKa = 11.84AAMEE2613 pKa = 4.35AQASAYY2619 pKa = 9.67LASLAPGVQLQQGTLTLGAASAVADD2644 pKa = 4.08GAEE2647 pKa = 4.0IMITGAGATAGGAPHH2662 pKa = 6.96GALYY2666 pKa = 8.43DD2667 pKa = 3.77TATGGTAVALVIDD2680 pKa = 4.9ARR2682 pKa = 11.84ALPQGIGLEE2691 pKa = 3.96MAGIDD2696 pKa = 3.41FAAFIGAATVRR2707 pKa = 11.84GGAGQNFFIGDD2718 pKa = 3.74AAAQRR2723 pKa = 11.84IVLTDD2728 pKa = 3.23GGGNDD2733 pKa = 3.45TLYY2736 pKa = 11.32GNGGNDD2742 pKa = 3.42VLGTAGGRR2750 pKa = 11.84DD2751 pKa = 4.02YY2752 pKa = 11.73LDD2754 pKa = 3.91GGAGNDD2760 pKa = 3.48ILFGGAGNDD2769 pKa = 3.74VLNGGADD2776 pKa = 3.57NDD2778 pKa = 4.29TLQGGRR2784 pKa = 11.84SDD2786 pKa = 3.36TGQWQFYY2793 pKa = 9.25LNPAGAVVGRR2803 pKa = 11.84HH2804 pKa = 5.04EE2805 pKa = 4.39MALTDD2810 pKa = 3.76AAATEE2815 pKa = 4.61TVTAAQLNQDD2825 pKa = 3.41VALLGFAGPKK2835 pKa = 9.37AANLQDD2841 pKa = 3.3WSLMYY2846 pKa = 10.23HH2847 pKa = 6.69AAYY2850 pKa = 9.91HH2851 pKa = 6.37RR2852 pKa = 11.84APDD2855 pKa = 4.34LGGLSYY2861 pKa = 10.53WSTSGGTPQQHH2872 pKa = 6.26AAGFLQSPEE2881 pKa = 3.88GLNGIMALNNHH2892 pKa = 6.54DD2893 pKa = 4.61FVVQLLQNSVGRR2905 pKa = 11.84AGTAAEE2911 pKa = 4.26LSRR2914 pKa = 11.84WIGMLDD2920 pKa = 3.59AAPGDD2925 pKa = 3.84MQVRR2929 pKa = 11.84GAVFTDD2935 pKa = 3.26IALSAEE2941 pKa = 3.88HH2942 pKa = 6.56RR2943 pKa = 11.84AGYY2946 pKa = 7.96ITADD2950 pKa = 3.64GVPLGGEE2957 pKa = 4.06LLADD2961 pKa = 3.56EE2962 pKa = 5.47RR2963 pKa = 11.84GWIAGSGDD2971 pKa = 3.65DD2972 pKa = 4.14RR2973 pKa = 11.84LQGGGGNDD2981 pKa = 3.83LLVGGDD2987 pKa = 3.71GVDD2990 pKa = 3.28TVVYY2994 pKa = 10.28GDD2996 pKa = 3.89AASSHH3001 pKa = 5.49SVVLGRR3007 pKa = 11.84TGEE3010 pKa = 4.14VMIAAPDD3017 pKa = 3.66GGRR3020 pKa = 11.84DD3021 pKa = 3.33TLRR3024 pKa = 11.84QIEE3027 pKa = 4.11RR3028 pKa = 11.84GEE3030 pKa = 4.1FKK3032 pKa = 10.87GGEE3035 pKa = 4.24TVDD3038 pKa = 4.69LGFTQASAKK3047 pKa = 10.19ALQEE3051 pKa = 3.95LGMMYY3056 pKa = 10.53HH3057 pKa = 6.34LTLNRR3062 pKa = 11.84AADD3065 pKa = 3.72LGGFQFWLASGLEE3078 pKa = 4.38GSALAHH3084 pKa = 6.55GFTDD3088 pKa = 3.56STEE3091 pKa = 3.69MAQRR3095 pKa = 11.84FGQLDD3100 pKa = 3.37DD3101 pKa = 4.29AGFVKK3106 pKa = 10.77LLYY3109 pKa = 10.44QNTVRR3114 pKa = 11.84HH3115 pKa = 6.41DD3116 pKa = 3.49PDD3118 pKa = 3.6AATLARR3124 pKa = 11.84WDD3126 pKa = 3.82SFLDD3130 pKa = 3.36SHH3132 pKa = 6.94HH3133 pKa = 6.77RR3134 pKa = 11.84ADD3136 pKa = 5.46LVALLASDD3144 pKa = 3.55VTLIGSQYY3152 pKa = 9.46GTDD3155 pKa = 3.32GMNLIGGLL3163 pKa = 3.73

Molecular weight: 305.42 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|L9PC82|L9PC82_9BURK Flagellar hook-length control protein OS=Janthinobacterium sp. HH01 OX=1198452 GN=Jab_2c12740 PE=4 SV=1
MM1 pKa = 7.91PKK3 pKa = 9.63MKK5 pKa = 9.83TKK7 pKa = 10.72SSAKK11 pKa = 9.15KK12 pKa = 9.67RR13 pKa = 11.84FRR15 pKa = 11.84VRR17 pKa = 11.84PGGTVKK23 pKa = 10.54SGMAFKK29 pKa = 10.69RR30 pKa = 11.84HH31 pKa = 5.84ILTKK35 pKa = 9.78KK36 pKa = 3.98TTKK39 pKa = 10.23NKK41 pKa = 9.21RR42 pKa = 11.84QLRR45 pKa = 11.84GTRR48 pKa = 11.84NINASDD54 pKa = 3.65VTSVMRR60 pKa = 11.84MMPTAA65 pKa = 4.09

Molecular weight: 7.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5974

0

5974

2157853

29

9114

361.2

39.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.79 ± 0.054

0.835 ± 0.01

5.393 ± 0.02

5.012 ± 0.029

3.489 ± 0.021

8.073 ± 0.031

2.166 ± 0.015

4.659 ± 0.022

3.665 ± 0.031

10.684 ± 0.047

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.561 ± 0.019

3.123 ± 0.023

4.891 ± 0.025

4.227 ± 0.028

6.158 ± 0.029

5.784 ± 0.025

5.307 ± 0.037

7.207 ± 0.028

1.346 ± 0.012

2.631 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski