Streptococcus phage Javan241

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 6.0

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 48 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4D6A649|A0A4D6A649_9CAUD Uncharacterized protein OS=Streptococcus phage Javan241 OX=2548065 GN=Javan241_0005 PE=4 SV=1
MM1 pKa = 6.43TTVNEE6 pKa = 4.18ALNDD10 pKa = 3.99LSALVYY16 pKa = 10.75SGTPVGNGEE25 pKa = 4.42CYY27 pKa = 10.82ALASYY32 pKa = 10.59YY33 pKa = 10.57EE34 pKa = 4.24SLINPDD40 pKa = 3.04GTVGLGAGVGYY51 pKa = 10.77VSGAIGDD58 pKa = 4.43TICAANIGTSYY69 pKa = 11.07DD70 pKa = 2.85WSANGWSVSSDD81 pKa = 4.1DD82 pKa = 4.21EE83 pKa = 4.31LQPGQILTIQANAYY97 pKa = 9.18NEE99 pKa = 4.18YY100 pKa = 8.53GHH102 pKa = 6.13VVVVEE107 pKa = 4.24AVDD110 pKa = 4.19GDD112 pKa = 3.85QLTVIEE118 pKa = 4.31QNYY121 pKa = 10.0AGARR125 pKa = 11.84YY126 pKa = 8.23PVRR129 pKa = 11.84NYY131 pKa = 10.66YY132 pKa = 10.02SASEE136 pKa = 4.1YY137 pKa = 9.63QQTVAHH143 pKa = 6.67YY144 pKa = 7.2ITPPGAEE151 pKa = 4.2TTEE154 pKa = 4.4SASDD158 pKa = 3.66TNTSTTSTEE167 pKa = 3.86PNSYY171 pKa = 10.62KK172 pKa = 10.47EE173 pKa = 4.45DD174 pKa = 3.17GTMTVTVDD182 pKa = 4.2AINVRR187 pKa = 11.84RR188 pKa = 11.84SPDD191 pKa = 3.0TSGEE195 pKa = 4.05VVAQYY200 pKa = 10.62TKK202 pKa = 10.75GQSFKK207 pKa = 10.33YY208 pKa = 8.72DD209 pKa = 3.48TVIIDD214 pKa = 3.42YY215 pKa = 11.16NGFVWVSYY223 pKa = 10.79VGASGNRR230 pKa = 11.84NYY232 pKa = 10.56VATGPTQNGKK242 pKa = 9.79RR243 pKa = 11.84FGDD246 pKa = 2.84AWGTFKK252 pKa = 11.14

Molecular weight: 26.9 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4D6A7I5|A0A4D6A7I5_9CAUD Uncharacterized protein OS=Streptococcus phage Javan241 OX=2548065 GN=Javan241_0046 PE=4 SV=1
MM1 pKa = 7.66ADD3 pKa = 3.04VRR5 pKa = 11.84VVVDD9 pKa = 3.89LGGVDD14 pKa = 3.77RR15 pKa = 11.84KK16 pKa = 10.56LSPEE20 pKa = 3.65AEE22 pKa = 4.22KK23 pKa = 10.68RR24 pKa = 11.84GKK26 pKa = 10.21LAMASQGMMIMEE38 pKa = 4.53SYY40 pKa = 10.53IPLRR44 pKa = 11.84GGPLRR49 pKa = 11.84ASGRR53 pKa = 11.84IEE55 pKa = 3.98ANGDD59 pKa = 2.59ISYY62 pKa = 8.34NTVYY66 pKa = 10.91ARR68 pKa = 11.84AHH70 pKa = 6.28FYY72 pKa = 9.96GANGIVVFRR81 pKa = 11.84RR82 pKa = 11.84YY83 pKa = 7.67RR84 pKa = 11.84TPGTGKK90 pKa = 10.07RR91 pKa = 11.84WDD93 pKa = 3.71RR94 pKa = 11.84ALKK97 pKa = 10.94ANVEE101 pKa = 4.14KK102 pKa = 10.75LKK104 pKa = 10.68QVAVRR109 pKa = 11.84AMGLRR114 pKa = 3.59

Molecular weight: 12.61 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

48

0

48

10945

48

1290

228.0

25.57

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.775 ± 1.018

0.457 ± 0.079

6.725 ± 0.449

6.971 ± 0.638

4.111 ± 0.224

6.633 ± 0.579

1.151 ± 0.155

6.88 ± 0.285

7.784 ± 0.433

8.287 ± 0.362

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.503 ± 0.243

5.793 ± 0.388

2.805 ± 0.231

4.358 ± 0.211

4.157 ± 0.376

6.578 ± 0.306

5.747 ± 0.28

6.423 ± 0.355

0.978 ± 0.126

3.883 ± 0.341
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski