Bhendi yellow vein India virus [India:Dharwad OYDWR2:2006]

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Repensiviricetes; Geplafuvirales; Geminiviridae; Begomovirus; Bhendi yellow vein India virus

Average proteome isoelectric point is 7.92

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E7BNX0|E7BNX0_9GEMI AC4 protein OS=Bhendi yellow vein India virus [India:Dharwad OYDWR2:2006] OX=908028 GN=AC4 PE=3 SV=1
MM1 pKa = 7.43PSKK4 pKa = 10.64RR5 pKa = 11.84FQIYY9 pKa = 9.59SKK11 pKa = 10.96NYY13 pKa = 7.65FLTYY17 pKa = 9.19PKK19 pKa = 10.53CSLTKK24 pKa = 10.67EE25 pKa = 4.01EE26 pKa = 5.06ALSQFLNLQTPVNKK40 pKa = 10.12KK41 pKa = 10.01FIRR44 pKa = 11.84ICRR47 pKa = 11.84EE48 pKa = 3.39LHH50 pKa = 6.43EE51 pKa = 5.97DD52 pKa = 3.8GNPHH56 pKa = 6.62LRR58 pKa = 11.84VLIQFEE64 pKa = 5.0GKK66 pKa = 9.1FQCRR70 pKa = 11.84NNRR73 pKa = 11.84FFDD76 pKa = 3.57LTSPTRR82 pKa = 11.84SAHH85 pKa = 4.94FHH87 pKa = 6.55PNIQGAKK94 pKa = 9.54SSSDD98 pKa = 3.06VQTYY102 pKa = 7.37MEE104 pKa = 5.12KK105 pKa = 10.84DD106 pKa = 3.41GDD108 pKa = 4.1ILDD111 pKa = 4.24HH112 pKa = 7.29GVFQVDD118 pKa = 3.28GRR120 pKa = 11.84SATGGCQTANDD131 pKa = 4.46AYY133 pKa = 10.87AEE135 pKa = 4.61AINAGSKK142 pKa = 10.06AQALNILKK150 pKa = 10.06EE151 pKa = 3.83KK152 pKa = 10.54APRR155 pKa = 11.84DD156 pKa = 3.59FLLQFHH162 pKa = 6.73NLNSNLDD169 pKa = 3.64RR170 pKa = 11.84YY171 pKa = 9.28FQEE174 pKa = 4.41PPAPYY179 pKa = 9.91VSPFSSSSFDD189 pKa = 3.41QVPEE193 pKa = 3.95EE194 pKa = 4.12LEE196 pKa = 3.7EE197 pKa = 4.13WACEE201 pKa = 4.06NVVDD205 pKa = 5.15AAARR209 pKa = 11.84PLRR212 pKa = 11.84PQSIVIEE219 pKa = 4.21EE220 pKa = 4.12DD221 pKa = 3.13SRR223 pKa = 11.84TGKK226 pKa = 8.55TMWARR231 pKa = 11.84SLSPHH236 pKa = 6.8NYY238 pKa = 9.85LCGNLDD244 pKa = 4.48LSPKK248 pKa = 10.02VYY250 pKa = 11.07SNDD253 pKa = 2.25AWYY256 pKa = 10.92NVIDD260 pKa = 4.79DD261 pKa = 4.33VDD263 pKa = 3.73PHH265 pKa = 6.08FLKK268 pKa = 10.67HH269 pKa = 5.9FKK271 pKa = 10.69EE272 pKa = 4.43FMGAQRR278 pKa = 11.84DD279 pKa = 3.81WQSNTKK285 pKa = 9.6YY286 pKa = 10.57GKK288 pKa = 9.12PVQIKK293 pKa = 10.41GGIPTIFLCNPGPNASYY310 pKa = 11.2KK311 pKa = 10.7EE312 pKa = 3.97FLDD315 pKa = 3.54EE316 pKa = 5.43DD317 pKa = 4.1KK318 pKa = 11.59NSALKK323 pKa = 10.43SWALKK328 pKa = 10.14NATFVSLTQPLYY340 pKa = 11.11SGTNQSSTQGSEE352 pKa = 3.85EE353 pKa = 4.21SAHH356 pKa = 6.46EE357 pKa = 4.26EE358 pKa = 3.94TSGPP362 pKa = 3.67

Molecular weight: 40.88 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E7BNX3|E7BNX3_9GEMI AC5 protein OS=Bhendi yellow vein India virus [India:Dharwad OYDWR2:2006] OX=908028 GN=AC5 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 10.21RR4 pKa = 11.84AADD7 pKa = 3.55IVISTPASKK16 pKa = 10.29VRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84LNFGSPYY27 pKa = 8.67TSRR30 pKa = 11.84AAAPIVRR37 pKa = 11.84VTKK40 pKa = 9.91QQAWTNRR47 pKa = 11.84PMNRR51 pKa = 11.84KK52 pKa = 7.8PRR54 pKa = 11.84MYY56 pKa = 10.68RR57 pKa = 11.84MYY59 pKa = 10.44RR60 pKa = 11.84SPDD63 pKa = 3.21VPRR66 pKa = 11.84GCEE69 pKa = 4.34GPCKK73 pKa = 10.01VQSFEE78 pKa = 4.02SRR80 pKa = 11.84HH81 pKa = 5.54DD82 pKa = 3.51VVHH85 pKa = 6.75IGKK88 pKa = 9.41VMCISDD94 pKa = 3.53VTRR97 pKa = 11.84GVGLTHH103 pKa = 7.8RR104 pKa = 11.84IGKK107 pKa = 8.54RR108 pKa = 11.84FCVKK112 pKa = 9.96SVYY115 pKa = 10.52VLGKK119 pKa = 9.41IWMDD123 pKa = 3.35EE124 pKa = 4.04NIKK127 pKa = 9.32TKK129 pKa = 10.6NHH131 pKa = 6.07TNSVMPFLVRR141 pKa = 11.84DD142 pKa = 3.81RR143 pKa = 11.84RR144 pKa = 11.84PTDD147 pKa = 3.06KK148 pKa = 10.78PQDD151 pKa = 3.59FGEE154 pKa = 4.33VFNMFDD160 pKa = 4.08NQPDD164 pKa = 3.5MATVKK169 pKa = 10.5NMHH172 pKa = 6.97RR173 pKa = 11.84DD174 pKa = 3.31RR175 pKa = 11.84YY176 pKa = 8.78QVLRR180 pKa = 11.84KK181 pKa = 8.43WHH183 pKa = 5.58ATVTGGQYY191 pKa = 10.85ASKK194 pKa = 10.24EE195 pKa = 3.73QALVKK200 pKa = 10.65KK201 pKa = 9.58FIRR204 pKa = 11.84VNNYY208 pKa = 7.74VVYY211 pKa = 9.96NQQEE215 pKa = 3.8AGKK218 pKa = 10.1YY219 pKa = 8.23EE220 pKa = 4.02NHH222 pKa = 6.47TEE224 pKa = 3.99NALMLYY230 pKa = 7.52MACTHH235 pKa = 7.06ASNPVYY241 pKa = 9.86ATLKK245 pKa = 9.47IRR247 pKa = 11.84IYY249 pKa = 10.64FYY251 pKa = 11.34DD252 pKa = 3.32SVTNN256 pKa = 3.98

Molecular weight: 29.68 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1238

97

362

176.9

20.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.523 ± 0.912

2.585 ± 0.559

4.443 ± 0.642

4.362 ± 0.793

4.362 ± 0.534

4.766 ± 0.227

4.12 ± 0.721

5.331 ± 0.887

5.977 ± 0.537

8.158 ± 1.095

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.827 ± 0.706

5.897 ± 0.755

5.977 ± 0.545

5.331 ± 0.685

6.058 ± 0.885

8.481 ± 1.627

5.735 ± 0.714

6.139 ± 1.273

1.212 ± 0.082

3.716 ± 0.668
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski