Gyrovirus 4

Taxonomy: Viruses; Anelloviridae; Gyrovirus; Gyrovirus homsa3

Average proteome isoelectric point is 7.52

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|I7DCG0|I7DCG0_9VIRU CA1 OS=Gyrovirus 4 OX=1214955 GN=VP1 PE=3 SV=1
MM1 pKa = 7.76GSPDD5 pKa = 3.32HH6 pKa = 6.91RR7 pKa = 11.84FSAVPIDD14 pKa = 5.03LLDD17 pKa = 3.95SVCPQWKK24 pKa = 8.77QVCFNYY30 pKa = 10.66GIACWLTEE38 pKa = 3.75CRR40 pKa = 11.84VSHH43 pKa = 6.65SRR45 pKa = 11.84VCRR48 pKa = 11.84CTSFRR53 pKa = 11.84NHH55 pKa = 5.54WFQLEE60 pKa = 4.2GKK62 pKa = 8.42PVSTVEE68 pKa = 4.31VGVQTDD74 pKa = 3.88PGDD77 pKa = 3.91LEE79 pKa = 4.39PPRR82 pKa = 11.84SGTSTAEE89 pKa = 3.2IGPRR93 pKa = 11.84VDD95 pKa = 2.8AARR98 pKa = 11.84RR99 pKa = 11.84LLSSISFKK107 pKa = 10.72RR108 pKa = 11.84DD109 pKa = 2.47ACRR112 pKa = 11.84ALEE115 pKa = 4.21GAPKK119 pKa = 9.63PKK121 pKa = 9.68KK122 pKa = 9.8RR123 pKa = 11.84KK124 pKa = 9.85RR125 pKa = 11.84GDD127 pKa = 3.02ARR129 pKa = 11.84KK130 pKa = 9.49EE131 pKa = 3.36FLRR134 pKa = 11.84RR135 pKa = 11.84FRR137 pKa = 11.84EE138 pKa = 4.52GEE140 pKa = 3.98EE141 pKa = 4.29TEE143 pKa = 5.94SDD145 pKa = 3.98AEE147 pKa = 3.88WDD149 pKa = 4.37SFVEE153 pKa = 4.34WSDD156 pKa = 3.42SDD158 pKa = 3.66GDD160 pKa = 3.94PGVDD164 pKa = 3.57YY165 pKa = 10.32MRR167 pKa = 11.84GGAGGGILRR176 pKa = 11.84EE177 pKa = 4.07DD178 pKa = 3.47RR179 pKa = 11.84MGGGIEE185 pKa = 4.06VEE187 pKa = 4.38STGGGTGGTEE197 pKa = 3.65GTPFLKK203 pKa = 10.65LLSGNFTSSTPARR216 pKa = 11.84MM217 pKa = 3.49

Molecular weight: 23.77 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|I7DCG0|I7DCG0_9VIRU CA1 OS=Gyrovirus 4 OX=1214955 GN=VP1 PE=3 SV=1
MM1 pKa = 6.8VRR3 pKa = 11.84FRR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84PWGRR11 pKa = 11.84LYY13 pKa = 10.84AWRR16 pKa = 11.84RR17 pKa = 11.84GGWHH21 pKa = 6.77FKK23 pKa = 9.76RR24 pKa = 11.84RR25 pKa = 11.84PYY27 pKa = 9.81GRR29 pKa = 11.84WYY31 pKa = 10.62RR32 pKa = 11.84SGKK35 pKa = 7.56YY36 pKa = 8.05RR37 pKa = 11.84RR38 pKa = 11.84GYY40 pKa = 9.25RR41 pKa = 11.84RR42 pKa = 11.84HH43 pKa = 5.78RR44 pKa = 11.84RR45 pKa = 11.84YY46 pKa = 10.62AFSKK50 pKa = 8.59AFKK53 pKa = 9.67RR54 pKa = 11.84KK55 pKa = 9.52FYY57 pKa = 9.72IQHH60 pKa = 6.33PGSYY64 pKa = 9.24VVRR67 pKa = 11.84KK68 pKa = 6.55TRR70 pKa = 11.84PYY72 pKa = 10.54NSMKK76 pKa = 10.38VFFQGVIFVNNAVFQSGQAEE96 pKa = 3.95TSAFRR101 pKa = 11.84VYY103 pKa = 10.55SIEE106 pKa = 3.98LSLRR110 pKa = 11.84NLLLAYY116 pKa = 9.15YY117 pKa = 8.72VQYY120 pKa = 11.36VSGGPGWTGTSAAKK134 pKa = 10.78VNISPLDD141 pKa = 3.29WWRR144 pKa = 11.84WAYY147 pKa = 10.1IRR149 pKa = 11.84MHH151 pKa = 7.26PSPDD155 pKa = 2.98QRR157 pKa = 11.84VFANATRR164 pKa = 11.84PTDD167 pKa = 3.56TQLFNYY173 pKa = 8.88FSQWQLFRR181 pKa = 11.84HH182 pKa = 6.16IKK184 pKa = 9.02TDD186 pKa = 3.9FRR188 pKa = 11.84VLNTDD193 pKa = 3.19VTNTPDD199 pKa = 3.39VRR201 pKa = 11.84ILASLLTQDD210 pKa = 5.54SYY212 pKa = 11.63WQVQNKK218 pKa = 8.12TSADD222 pKa = 3.36LSQLKK227 pKa = 9.99FPSFAEE233 pKa = 3.99LTAWGAQWAFLPGQKK248 pKa = 9.72SVSGRR253 pKa = 11.84SFNHH257 pKa = 5.86HH258 pKa = 5.96SMRR261 pKa = 11.84GTNDD265 pKa = 3.26PKK267 pKa = 11.06GEE269 pKa = 3.98PWKK272 pKa = 9.49TLTPLQHH279 pKa = 6.18QVVSDD284 pKa = 3.7INWVFGTLFLAEE296 pKa = 4.46FSNFTVLNEE305 pKa = 3.95YY306 pKa = 8.8NTEE309 pKa = 3.75NRR311 pKa = 11.84ALAATGLSEE320 pKa = 3.7TWSIVKK326 pKa = 9.48VRR328 pKa = 11.84SLFEE332 pKa = 4.18FGNQQYY338 pKa = 11.3LLADD342 pKa = 3.65SVRR345 pKa = 11.84FTSHH349 pKa = 7.21LPTT352 pKa = 4.46

Molecular weight: 41.39 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

569

217

352

284.5

32.58

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.151 ± 0.39

1.23 ± 1.252

4.569 ± 1.469

4.569 ± 2.047

6.327 ± 1.078

8.436 ± 2.513

2.109 ± 0.456

2.636 ± 0.081

4.218 ± 0.044

7.206 ± 0.762

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.406 ± 0.274

3.691 ± 1.448

5.097 ± 0.561

4.042 ± 1.379

9.666 ± 0.007

8.612 ± 0.379

6.503 ± 0.321

6.503 ± 0.321

3.515 ± 0.759

3.515 ± 1.626
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski