Cellulomonas sp. PSBB021

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Cellulomonadaceae; Cellulomonas; unclassified Cellulomonas

Average proteome isoelectric point is 6.18

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3224 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A222XBX1|A0A222XBX1_9CELL Peptidase_M23 domain-containing protein OS=Cellulomonas sp. PSBB021 OX=2003551 GN=CBP52_10650 PE=4 SV=1
MM1 pKa = 7.46LPSKK5 pKa = 9.78SLRR8 pKa = 11.84TAGLASGALAALLALSACSSSSSATDD34 pKa = 3.56DD35 pKa = 3.39ATTAAPAAGAYY46 pKa = 9.5QSLADD51 pKa = 4.08SSACVDD57 pKa = 4.0LRR59 pKa = 11.84EE60 pKa = 4.32TNPDD64 pKa = 3.12LVGTTKK70 pKa = 10.46TNALNPHH77 pKa = 5.19TPGYY81 pKa = 10.45EE82 pKa = 4.11VIDD85 pKa = 4.28PEE87 pKa = 5.76NPDD90 pKa = 3.17QYY92 pKa = 11.23IGFDD96 pKa = 3.3IDD98 pKa = 3.26LGEE101 pKa = 5.45AIGACLGFEE110 pKa = 4.0VDD112 pKa = 4.08YY113 pKa = 11.1IPVGFAEE120 pKa = 5.9LIPTVASGQADD131 pKa = 3.87WIVSNLYY138 pKa = 9.01ATEE141 pKa = 3.8EE142 pKa = 4.06RR143 pKa = 11.84AQGGVDD149 pKa = 4.49FISYY153 pKa = 10.73SKK155 pKa = 11.02VFDD158 pKa = 5.15GILVTTGNPKK168 pKa = 10.69GITGIDD174 pKa = 3.32TSVCGTTVALNKK186 pKa = 10.51GYY188 pKa = 11.09VEE190 pKa = 4.44VPLVEE195 pKa = 4.82AMGPEE200 pKa = 4.52CEE202 pKa = 4.5KK203 pKa = 11.07AGLPAPTVSLFDD215 pKa = 3.8SSADD219 pKa = 3.46CVQAILAGRR228 pKa = 11.84ADD230 pKa = 4.08AYY232 pKa = 10.87MNDD235 pKa = 2.91INTVKK240 pKa = 10.58GYY242 pKa = 9.95IAEE245 pKa = 4.74HH246 pKa = 6.8PDD248 pKa = 3.49EE249 pKa = 5.35LDD251 pKa = 3.39SAEE254 pKa = 4.23TVMLDD259 pKa = 3.25YY260 pKa = 11.0EE261 pKa = 4.21IGIGVLQGDD270 pKa = 3.91HH271 pKa = 7.04AFRR274 pKa = 11.84DD275 pKa = 4.01AVQAALLEE283 pKa = 4.33IQNSGLQAEE292 pKa = 5.33LATKK296 pKa = 9.69WKK298 pKa = 10.36LDD300 pKa = 3.73EE301 pKa = 4.38NAVAEE306 pKa = 4.16PSILSVGG313 pKa = 3.5

Molecular weight: 32.43 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A222XBS4|A0A222XBS4_9CELL TetR family transcriptional regulator OS=Cellulomonas sp. PSBB021 OX=2003551 GN=CBP52_12300 PE=4 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.87KK16 pKa = 9.7HH17 pKa = 5.84RR18 pKa = 11.84KK19 pKa = 8.56LLRR22 pKa = 11.84KK23 pKa = 7.78TRR25 pKa = 11.84HH26 pKa = 3.65QRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.78KK32 pKa = 9.85

Molecular weight: 4.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3224

0

3224

1072490

32

1984

332.7

35.33

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

14.477 ± 0.068

0.613 ± 0.01

6.584 ± 0.033

5.187 ± 0.041

2.447 ± 0.025

9.226 ± 0.041

2.162 ± 0.024

2.617 ± 0.034

1.478 ± 0.029

10.123 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.445 ± 0.018

1.458 ± 0.025

5.973 ± 0.036

2.693 ± 0.024

8.205 ± 0.061

4.996 ± 0.038

6.503 ± 0.051

10.39 ± 0.045

1.599 ± 0.019

1.824 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski