Eoetvoesia caeni

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Eoetvoesia

Average proteome isoelectric point is 6.76

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4508 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A366H7Z9|A0A366H7Z9_9BURK Thiosulfate dehydrogenase OS=Eoetvoesia caeni OX=645616 GN=DFR37_10787 PE=4 SV=1
MM1 pKa = 7.67SDD3 pKa = 2.86IPEE6 pKa = 4.4NFDD9 pKa = 3.11TDD11 pKa = 3.28IATLVAALSCGDD23 pKa = 3.86LDD25 pKa = 3.48EE26 pKa = 6.7HH27 pKa = 6.64EE28 pKa = 4.37IARR31 pKa = 11.84IVGICRR37 pKa = 11.84QALEE41 pKa = 4.22NPAAVLAEE49 pKa = 4.13NYY51 pKa = 8.05GTEE54 pKa = 4.11AAEE57 pKa = 4.18VAQYY61 pKa = 11.1DD62 pKa = 4.01PQGVIAFIVFIEE74 pKa = 4.29LEE76 pKa = 4.35DD77 pKa = 3.84YY78 pKa = 10.69FAVADD83 pKa = 4.2TVDD86 pKa = 3.83EE87 pKa = 4.12LHH89 pKa = 6.37EE90 pKa = 4.08QIIAAFEE97 pKa = 4.1APQLPDD103 pKa = 3.43YY104 pKa = 10.69PYY106 pKa = 11.05DD107 pKa = 4.37DD108 pKa = 4.65NDD110 pKa = 3.64FEE112 pKa = 4.68TVSDD116 pKa = 3.87YY117 pKa = 10.56FQWLDD122 pKa = 3.37AQLLEE127 pKa = 3.93HH128 pKa = 6.61HH129 pKa = 6.4AAYY132 pKa = 10.54RR133 pKa = 11.84LIHH136 pKa = 6.43FGQSYY141 pKa = 9.67TNDD144 pKa = 3.17FQTVLVHH151 pKa = 7.61RR152 pKa = 11.84EE153 pKa = 4.13GTDD156 pKa = 3.14SLLALCRR163 pKa = 11.84KK164 pKa = 9.66LKK166 pKa = 11.03LEE168 pKa = 4.62AEE170 pKa = 4.41YY171 pKa = 11.37CEE173 pKa = 4.23

Molecular weight: 19.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A366HHH1|A0A366HHH1_9BURK Xanthine dehydrogenase YagT iron-sulfur-binding subunit OS=Eoetvoesia caeni OX=645616 GN=DFR37_102393 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVTRR11 pKa = 11.84RR12 pKa = 11.84KK13 pKa = 8.43RR14 pKa = 11.84THH16 pKa = 5.88GFLVRR21 pKa = 11.84MKK23 pKa = 9.7TRR25 pKa = 11.84GGRR28 pKa = 11.84AVIKK32 pKa = 10.36ARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.79GRR39 pKa = 11.84KK40 pKa = 8.75RR41 pKa = 11.84LAVV44 pKa = 3.41

Molecular weight: 5.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4508

0

4508

1422334

27

3222

315.5

34.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.625 ± 0.043

0.943 ± 0.012

5.29 ± 0.033

5.335 ± 0.035

3.568 ± 0.023

8.012 ± 0.038

2.29 ± 0.017

5.116 ± 0.025

3.584 ± 0.029

10.607 ± 0.049

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.533 ± 0.019

3.0 ± 0.02

5.048 ± 0.022

4.227 ± 0.023

6.455 ± 0.04

5.842 ± 0.029

5.209 ± 0.038

7.328 ± 0.033

1.441 ± 0.014

2.546 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski