Torque teno equus virus 1

Taxonomy: Viruses; Anelloviridae; Mutorquevirus; Torque teno equid virus 1

Average proteome isoelectric point is 7.7

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0H4AQ58|A0A0H4AQ58_9VIRU Capsid protein OS=Torque teno equus virus 1 OX=1673633 PE=3 SV=1
MM1 pKa = 7.61SYY3 pKa = 10.86DD4 pKa = 3.49IVSSMDD10 pKa = 3.22GGSSQSSAMVVLAQNGPHH28 pKa = 6.27LTCCLGSVYY37 pKa = 10.81SAFCTSAFGCVGLSPVSHH55 pKa = 6.44MPLVSSAVMTLATQQ69 pKa = 3.73

Molecular weight: 6.98 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0H4AQY9|A0A0H4AQY9_9VIRU Uncharacterized protein OS=Torque teno equus virus 1 OX=1673633 PE=4 SV=1
MM1 pKa = 7.81SDD3 pKa = 3.51PKK5 pKa = 11.2SFLDD9 pKa = 3.3LRR11 pKa = 11.84RR12 pKa = 11.84GHH14 pKa = 6.33RR15 pKa = 11.84FKK17 pKa = 11.33NLAHH21 pKa = 7.08PSGSGCPSCPLTPRR35 pKa = 11.84ASLRR39 pKa = 11.84SGTRR43 pKa = 11.84PAGDD47 pKa = 3.35IKK49 pKa = 10.85RR50 pKa = 11.84SACLRR55 pKa = 11.84LGFAPPTLGSVTALFLSLLCFYY77 pKa = 11.32

Molecular weight: 8.28 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

919

69

635

229.8

26.44

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.114 ± 0.786

1.741 ± 0.958

5.332 ± 0.512

4.57 ± 1.292

2.829 ± 0.587

7.291 ± 1.177

2.176 ± 0.385

3.7 ± 0.96

6.746 ± 1.274

6.638 ± 1.939

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.176 ± 0.803

3.7 ± 0.657

5.55 ± 0.804

4.461 ± 1.216

8.923 ± 1.936

8.379 ± 2.672

8.052 ± 0.963

4.897 ± 1.223

3.7 ± 1.175

4.026 ± 1.325
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski