Aureibacillus halotolerans
Average proteome isoelectric point is 6.17
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 4165 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A4R6TTI9|A0A4R6TTI9_9BACI ArsR family transcriptional regulator OS=Aureibacillus halotolerans OX=1508390 GN=EV213_11775 PE=4 SV=1
MM1 pKa = 7.26 KK2 pKa = 10.13 QRR4 pKa = 11.84 GWIMVIVLAIVVVGFIAIVVLNNQSNGSNANGGSGMYY41 pKa = 9.09 TGQGDD46 pKa = 3.93 PEE48 pKa = 4.46 AFAEE52 pKa = 4.93 LYY54 pKa = 10.62 SEE56 pKa = 4.26 QPVLGDD62 pKa = 3.28 EE63 pKa = 4.26 NAPVQIVQFGDD74 pKa = 3.91 YY75 pKa = 10.31 KK76 pKa = 11.25 CPACKK81 pKa = 10.21 NFEE84 pKa = 4.15 EE85 pKa = 4.27 QLVPIIKK92 pKa = 9.77 QEE94 pKa = 3.95 YY95 pKa = 8.36 VDD97 pKa = 3.39 TGKK100 pKa = 10.68 AQFYY104 pKa = 9.59 FMNYY108 pKa = 9.19 PFLGDD113 pKa = 3.77 DD114 pKa = 3.65 AAILASYY121 pKa = 10.75 AEE123 pKa = 4.32 AVYY126 pKa = 8.67 ATLGNDD132 pKa = 4.12 AFWTYY137 pKa = 11.16 NSAVYY142 pKa = 9.61 EE143 pKa = 4.18 RR144 pKa = 11.84 QGDD147 pKa = 3.68 EE148 pKa = 3.73 RR149 pKa = 11.84 LAWGNDD155 pKa = 3.1 EE156 pKa = 5.02 FNQTLIQEE164 pKa = 4.63 LFSEE168 pKa = 4.78 EE169 pKa = 4.24 EE170 pKa = 3.83 ATQVLEE176 pKa = 4.6 AYY178 pKa = 9.66 EE179 pKa = 4.59 SGDD182 pKa = 3.37 FADD185 pKa = 4.47 IVADD189 pKa = 4.18 EE190 pKa = 4.35 KK191 pKa = 11.6 AFAEE195 pKa = 4.43 SQGVTGTPSLFINGKK210 pKa = 9.02 KK211 pKa = 10.01 VEE213 pKa = 4.21 MDD215 pKa = 3.31 NLEE218 pKa = 4.12 QVADD222 pKa = 4.04 LNKK225 pKa = 10.3 LVEE228 pKa = 4.3 EE229 pKa = 4.55 AATNGG234 pKa = 3.44
Molecular weight: 25.7 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.772
IPC2_protein 3.91
IPC_protein 3.872
Toseland 3.681
ProMoST 3.999
Dawson 3.821
Bjellqvist 3.986
Wikipedia 3.706
Rodwell 3.694
Grimsley 3.592
Solomon 3.821
Lehninger 3.77
Nozaki 3.935
DTASelect 4.088
Thurlkill 3.706
EMBOSS 3.719
Sillero 3.973
Patrickios 1.863
IPC_peptide 3.821
IPC2_peptide 3.961
IPC2.peptide.svr19 3.884
Protein with the highest isoelectric point:
>tr|A0A4R6U5G4|A0A4R6U5G4_9BACI L-rhamnose isomerase/sugar isomerase OS=Aureibacillus halotolerans OX=1508390 GN=EV213_11012 PE=4 SV=1
MM1 pKa = 7.45 KK2 pKa = 10.14 RR3 pKa = 11.84 RR4 pKa = 11.84 AEE6 pKa = 4.07 HH7 pKa = 6.01 PQTGKK12 pKa = 9.8 WFFHH16 pKa = 6.33 FSRR19 pKa = 11.84 LEE21 pKa = 3.49 ISVPQFQRR29 pKa = 11.84 AAAGQRR35 pKa = 11.84 KK36 pKa = 9.27 AEE38 pKa = 4.11 RR39 pKa = 11.84 RR40 pKa = 11.84 CTEE43 pKa = 3.64 AQVRR47 pKa = 11.84 TSSGRR52 pKa = 11.84 EE53 pKa = 3.73 MVLHH57 pKa = 6.67 ISLARR62 pKa = 11.84 GFLRR66 pKa = 11.84 RR67 pKa = 11.84 SFYY70 pKa = 10.8 GAQLAKK76 pKa = 10.62 KK77 pKa = 9.86 SGAPCASIRR86 pKa = 11.84 IIPKK90 pKa = 9.04 PRR92 pKa = 11.84 NGSPISRR99 pKa = 11.84 FGDD102 pKa = 3.3 VFCIKK107 pKa = 9.69 EE108 pKa = 4.15 PCHH111 pKa = 6.31 IPCSLDD117 pKa = 3.25 NASPQPYY124 pKa = 9.85 LHH126 pKa = 7.2 LILNHH131 pKa = 5.73 FRR133 pKa = 11.84 TFEE136 pKa = 3.96 WSSATQEE143 pKa = 4.24 SQALMTLYY151 pKa = 10.81 SKK153 pKa = 10.93 VEE155 pKa = 3.77 PEE157 pKa = 3.68 RR158 pKa = 11.84 RR159 pKa = 11.84 PFF161 pKa = 3.67
Molecular weight: 18.46 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.347
IPC2_protein 9.516
IPC_protein 10.101
Toseland 10.584
ProMoST 10.233
Dawson 10.687
Bjellqvist 10.379
Wikipedia 10.862
Rodwell 10.921
Grimsley 10.716
Solomon 10.789
Lehninger 10.76
Nozaki 10.613
DTASelect 10.365
Thurlkill 10.584
EMBOSS 10.979
Sillero 10.613
Patrickios 10.657
IPC_peptide 10.789
IPC2_peptide 9.589
IPC2.peptide.svr19 8.541
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
4165
0
4165
1211138
25
2337
290.8
32.5
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.956 ± 0.038
0.754 ± 0.011
5.342 ± 0.036
7.244 ± 0.047
4.401 ± 0.027
6.829 ± 0.032
2.387 ± 0.022
6.53 ± 0.035
5.48 ± 0.029
9.969 ± 0.044
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.824 ± 0.019
3.746 ± 0.025
3.938 ± 0.04
4.207 ± 0.027
4.483 ± 0.028
6.254 ± 0.029
5.865 ± 0.032
7.292 ± 0.047
1.233 ± 0.017
3.265 ± 0.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here