Coconut foliar decay alphasatellite 7

Taxonomy: Viruses; Alphasatellitidae; Petromoalphasatellitinae; Coprasatellite

Average proteome isoelectric point is 5.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2R4N9C1|A0A2R4N9C1_9VIRU Uncharacterized protein OS=Coconut foliar decay alphasatellite 7 OX=2161880 PE=4 SV=1
MM1 pKa = 8.51DD2 pKa = 4.1YY3 pKa = 11.08LKK5 pKa = 10.3PNNSISSVSLSSCTFYY21 pKa = 11.5KK22 pKa = 10.8LLVLQYY28 pKa = 10.74EE29 pKa = 4.67VLQHH33 pKa = 6.84LLRR36 pKa = 11.84TFHH39 pKa = 7.1KK40 pKa = 10.79AFVSNQDD47 pKa = 2.85ASEE50 pKa = 3.93LHH52 pKa = 5.66VRR54 pKa = 11.84KK55 pKa = 9.19EE56 pKa = 4.02HH57 pKa = 6.24FLSNNKK63 pKa = 10.11SYY65 pKa = 10.44FADD68 pKa = 3.82QIPSPVLNAQYY79 pKa = 10.47YY80 pKa = 10.58SLMSSSNLQAYY91 pKa = 9.81GPFLQDD97 pKa = 3.19EE98 pKa = 5.02EE99 pKa = 4.41ILAGAFVQSS108 pKa = 3.67

Molecular weight: 12.31 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2R4N9C1|A0A2R4N9C1_9VIRU Uncharacterized protein OS=Coconut foliar decay alphasatellite 7 OX=2161880 PE=4 SV=1
MM1 pKa = 7.64ASQVRR6 pKa = 11.84RR7 pKa = 11.84WVLTFNYY14 pKa = 9.27SDD16 pKa = 3.87EE17 pKa = 4.44SAASDD22 pKa = 3.34LVRR25 pKa = 11.84RR26 pKa = 11.84IEE28 pKa = 4.11SLKK31 pKa = 10.62LIYY34 pKa = 10.16GIIGDD39 pKa = 4.99EE40 pKa = 4.06IAPTTGQRR48 pKa = 11.84HH49 pKa = 4.74LQGFLHH55 pKa = 6.47LAGRR59 pKa = 11.84GRR61 pKa = 11.84TLEE64 pKa = 4.04GLKK67 pKa = 8.93KK68 pKa = 8.74TLEE71 pKa = 4.22NNTVHH76 pKa = 7.11LEE78 pKa = 3.9PAKK81 pKa = 10.96GSDD84 pKa = 3.59QQNKK88 pKa = 9.47IYY90 pKa = 10.28CSKK93 pKa = 10.69EE94 pKa = 3.58NVLFEE99 pKa = 4.83HH100 pKa = 7.03GVPTRR105 pKa = 11.84PGSKK109 pKa = 8.68RR110 pKa = 11.84KK111 pKa = 9.79LYY113 pKa = 10.34EE114 pKa = 4.04RR115 pKa = 11.84YY116 pKa = 10.07EE117 pKa = 4.06EE118 pKa = 4.29DD119 pKa = 3.68AEE121 pKa = 4.09EE122 pKa = 4.54LRR124 pKa = 11.84IEE126 pKa = 4.18EE127 pKa = 4.13PGAYY131 pKa = 9.04RR132 pKa = 11.84RR133 pKa = 11.84CKK135 pKa = 10.05MIEE138 pKa = 3.95KK139 pKa = 9.13QKK141 pKa = 10.57KK142 pKa = 6.14WNYY145 pKa = 8.45WVLNNPFPYY154 pKa = 10.28DD155 pKa = 3.75LYY157 pKa = 10.68QWQEE161 pKa = 3.65EE162 pKa = 4.27LMEE165 pKa = 4.3VLQEE169 pKa = 4.09PADD172 pKa = 3.59NRR174 pKa = 11.84TILWICGRR182 pKa = 11.84DD183 pKa = 3.5GGDD186 pKa = 2.94GKK188 pKa = 9.12TEE190 pKa = 3.9FGKK193 pKa = 11.05YY194 pKa = 9.9LGLNEE199 pKa = 4.03KK200 pKa = 9.22WFYY203 pKa = 11.15SCGGKK208 pKa = 7.83TRR210 pKa = 11.84DD211 pKa = 3.3VLYY214 pKa = 10.55QYY216 pKa = 10.6IEE218 pKa = 3.91EE219 pKa = 4.4PEE221 pKa = 4.12RR222 pKa = 11.84NFILDD227 pKa = 3.44VPRR230 pKa = 11.84CNDD233 pKa = 2.51QYY235 pKa = 11.41MNYY238 pKa = 11.05ALIEE242 pKa = 4.52CIKK245 pKa = 10.66NRR247 pKa = 11.84AFSSDD252 pKa = 3.0KK253 pKa = 11.21YY254 pKa = 11.25EE255 pKa = 4.06PLQYY259 pKa = 11.02LGFDD263 pKa = 3.33KK264 pKa = 11.23VHH266 pKa = 6.87VIVLCNFLPDD276 pKa = 3.64YY277 pKa = 11.15LKK279 pKa = 10.63ISEE282 pKa = 4.88DD283 pKa = 4.93RR284 pKa = 11.84IKK286 pKa = 10.8LWNII290 pKa = 3.27

Molecular weight: 34.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

398

108

290

199.0

23.24

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.523 ± 0.968

2.01 ± 0.536

5.025 ± 0.653

8.291 ± 1.809

4.271 ± 1.092

5.528 ± 1.816

2.261 ± 0.713

5.276 ± 1.234

6.533 ± 0.94

11.307 ± 1.276

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.508 ± 0.17

5.779 ± 0.347

4.02 ± 0.156

5.025 ± 1.177

5.528 ± 1.816

7.035 ± 3.843

3.015 ± 0.575

5.025 ± 0.719

1.759 ± 0.869

6.281 ± 0.099
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski