Petrochirus diogenes giant hermit crab associated circular virus

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 8.58

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0K1RLL5|A0A0K1RLL5_9CIRC Putative replication initiation protein OS=Petrochirus diogenes giant hermit crab associated circular virus OX=1692261 PE=4 SV=1
MM1 pKa = 6.99EE2 pKa = 5.46GKK4 pKa = 9.64RR5 pKa = 11.84VRR7 pKa = 11.84YY8 pKa = 9.22RR9 pKa = 11.84RR10 pKa = 11.84YY11 pKa = 10.17CITINNEE18 pKa = 3.7SDD20 pKa = 2.96NKK22 pKa = 10.59RR23 pKa = 11.84ILGLFLEE30 pKa = 5.08DD31 pKa = 4.48GIKK34 pKa = 10.34KK35 pKa = 10.25GVIGVEE41 pKa = 4.11TAPTTGTKK49 pKa = 9.96HH50 pKa = 4.62LQGYY54 pKa = 9.09IEE56 pKa = 5.03YY57 pKa = 7.41PTQRR61 pKa = 11.84DD62 pKa = 2.95WSSIKK67 pKa = 10.17KK68 pKa = 9.0VCPNAHH74 pKa = 6.13IEE76 pKa = 4.11AAKK79 pKa = 8.95GTSRR83 pKa = 11.84QNYY86 pKa = 7.03EE87 pKa = 3.86YY88 pKa = 9.51CTKK91 pKa = 10.18EE92 pKa = 3.83GNFVVHH98 pKa = 6.21GHH100 pKa = 6.2FEE102 pKa = 3.81TGKK105 pKa = 10.04RR106 pKa = 11.84KK107 pKa = 9.87RR108 pKa = 11.84RR109 pKa = 11.84DD110 pKa = 3.47YY111 pKa = 11.46SLSEE115 pKa = 3.92YY116 pKa = 10.21VKK118 pKa = 10.61QVLQDD123 pKa = 3.71EE124 pKa = 5.02LPNDD128 pKa = 3.42STFIRR133 pKa = 11.84NYY135 pKa = 10.61EE136 pKa = 4.27KK137 pKa = 10.55IQTHH141 pKa = 6.17AKK143 pKa = 9.62LVSSRR148 pKa = 11.84QEE150 pKa = 3.65KK151 pKa = 10.03VRR153 pKa = 11.84LFGEE157 pKa = 4.54LSCCKK162 pKa = 8.76VTSWQRR168 pKa = 11.84KK169 pKa = 8.0AIEE172 pKa = 4.13SLFLQGKK179 pKa = 9.51RR180 pKa = 11.84EE181 pKa = 3.96VLWIYY186 pKa = 10.62EE187 pKa = 4.34SVGGKK192 pKa = 10.19GKK194 pKa = 8.24TFLATILEE202 pKa = 4.4VVYY205 pKa = 10.56GFTRR209 pKa = 11.84FDD211 pKa = 4.77GITKK215 pKa = 10.36SRR217 pKa = 11.84DD218 pKa = 2.98IALLIPPIPKK228 pKa = 10.15GFVFDD233 pKa = 3.61VTRR236 pKa = 11.84DD237 pKa = 3.52DD238 pKa = 4.83ASNFSYY244 pKa = 9.44NTLEE248 pKa = 4.04QVKK251 pKa = 9.94NGYY254 pKa = 9.36VMSGKK259 pKa = 10.55YY260 pKa = 10.08GGSQHH265 pKa = 7.06LFRR268 pKa = 11.84PVPVIVLSNFEE279 pKa = 4.93PIRR282 pKa = 11.84SSLSEE287 pKa = 4.27DD288 pKa = 2.76RR289 pKa = 11.84WKK291 pKa = 10.79VWNIEE296 pKa = 3.93NASNEE301 pKa = 4.15KK302 pKa = 10.68KK303 pKa = 10.33EE304 pKa = 4.11DD305 pKa = 3.57LPEE308 pKa = 4.21EE309 pKa = 4.37GKK311 pKa = 10.25IPPKK315 pKa = 10.4AVLFEE320 pKa = 4.16EE321 pKa = 4.81EE322 pKa = 4.41EE323 pKa = 4.24NKK325 pKa = 10.37EE326 pKa = 4.03NQPNAEE332 pKa = 4.4ASNSQQSNKK341 pKa = 10.13DD342 pKa = 3.58VEE344 pKa = 4.31QHH346 pKa = 6.07RR347 pKa = 11.84EE348 pKa = 3.66KK349 pKa = 11.16

Molecular weight: 40.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0K1RLL5|A0A0K1RLL5_9CIRC Putative replication initiation protein OS=Petrochirus diogenes giant hermit crab associated circular virus OX=1692261 PE=4 SV=1
MM1 pKa = 7.42PRR3 pKa = 11.84MRR5 pKa = 11.84RR6 pKa = 11.84KK7 pKa = 8.73KK8 pKa = 8.33TFRR11 pKa = 11.84KK12 pKa = 9.26KK13 pKa = 10.75GKK15 pKa = 6.67FHH17 pKa = 7.05RR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84YY21 pKa = 8.13YY22 pKa = 9.25SKK24 pKa = 10.38KK25 pKa = 9.59RR26 pKa = 11.84RR27 pKa = 11.84TRR29 pKa = 11.84RR30 pKa = 11.84INLMQKK36 pKa = 9.12QVIHH40 pKa = 6.38NKK42 pKa = 6.64VTRR45 pKa = 11.84TLNNIVKK52 pKa = 9.97SEE54 pKa = 3.98WNTPTEE60 pKa = 3.99LRR62 pKa = 11.84LSIMDD67 pKa = 5.15LLTTTEE73 pKa = 3.95QEE75 pKa = 3.88VFKK78 pKa = 10.97AFKK81 pKa = 9.29YY82 pKa = 9.59YY83 pKa = 10.56KK84 pKa = 9.38IRR86 pKa = 11.84GVKK89 pKa = 9.97VEE91 pKa = 5.21FKK93 pKa = 9.78CTPPVAAIAPQAVLTSDD110 pKa = 2.84IVHH113 pKa = 6.84IPNVLPIMYY122 pKa = 9.59CWEE125 pKa = 4.1RR126 pKa = 11.84NNDD129 pKa = 2.76VDD131 pKa = 4.03YY132 pKa = 10.28TISRR136 pKa = 11.84MKK138 pKa = 10.37EE139 pKa = 3.61NPNRR143 pKa = 11.84KK144 pKa = 8.87QFDD147 pKa = 3.87PYY149 pKa = 10.96KK150 pKa = 9.91GYY152 pKa = 10.81CKK154 pKa = 9.85TYY156 pKa = 10.43RR157 pKa = 11.84GLLPEE162 pKa = 4.62FQDD165 pKa = 3.84KK166 pKa = 11.07SGNNLFLNKK175 pKa = 9.97KK176 pKa = 8.74SWISSADD183 pKa = 3.16TTYY186 pKa = 11.21LYY188 pKa = 11.27GRR190 pKa = 11.84FIFMPNIISTDD201 pKa = 3.44ALIVNYY207 pKa = 10.42NFDD210 pKa = 3.77IDD212 pKa = 3.78LTIYY216 pKa = 10.84YY217 pKa = 9.81SLKK220 pKa = 8.54TLQYY224 pKa = 10.05TII226 pKa = 4.6

Molecular weight: 27.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

575

226

349

287.5

33.58

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.478 ± 0.211

1.391 ± 0.035

4.174 ± 0.139

7.304 ± 2.081

4.522 ± 0.191

5.217 ± 1.417

1.739 ± 0.228

6.783 ± 0.653

9.565 ± 0.338

6.957 ± 0.313

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.565 ± 0.847

6.261 ± 0.453

4.348 ± 0.287

3.826 ± 0.403

7.13 ± 0.706

6.435 ± 0.867

6.435 ± 1.09

6.435 ± 0.622

1.391 ± 0.035

5.043 ± 0.881
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski