Fimbriiglobus ruber

Taxonomy: cellular organisms; Bacteria; PVC group; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae; Fimbriiglobus

Average proteome isoelectric point is 6.96

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10212 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A225E089|A0A225E089_9BACT Peptidase_M78 domain-containing protein OS=Fimbriiglobus ruber OX=1908690 GN=FRUB_00661 PE=4 SV=1
MM1 pKa = 7.54IRR3 pKa = 11.84NDD5 pKa = 3.57WRR7 pKa = 11.84RR8 pKa = 11.84MIQRR12 pKa = 11.84VGRR15 pKa = 11.84GQHH18 pKa = 5.11KK19 pKa = 9.16QNRR22 pKa = 11.84SPSMTVLQLEE32 pKa = 4.55DD33 pKa = 3.73RR34 pKa = 11.84SVPATFTAGSIQGQDD49 pKa = 2.62GWTGGTAAISTNVVQTVDD67 pKa = 3.3QSGANAFSGTGAWLVSNSTANGGYY91 pKa = 9.92NGNFVGWPFSPGLSVTAGDD110 pKa = 4.01PSSGAGADD118 pKa = 3.43TFTATLYY125 pKa = 10.54FKK127 pKa = 10.47SASSAADD134 pKa = 3.46GSNIEE139 pKa = 4.09VDD141 pKa = 3.75LGSAAGDD148 pKa = 3.45DD149 pKa = 3.66RR150 pKa = 11.84TNFLALTNEE159 pKa = 4.1DD160 pKa = 4.23DD161 pKa = 4.84ANGGLQIRR169 pKa = 11.84AAEE172 pKa = 4.12PMTDD176 pKa = 3.04GTTNFYY182 pKa = 8.51PTVSIATDD190 pKa = 3.18ITRR193 pKa = 11.84ATYY196 pKa = 10.22HH197 pKa = 6.61RR198 pKa = 11.84LDD200 pKa = 3.29VTANYY205 pKa = 11.0ADD207 pKa = 3.86GTDD210 pKa = 3.27NDD212 pKa = 4.53TFTVSLDD219 pKa = 3.45GKK221 pKa = 10.48VLTNPRR227 pKa = 11.84TGGTTFGTFEE237 pKa = 4.49AYY239 pKa = 8.47EE240 pKa = 4.22AAASPPASPPNYY252 pKa = 8.69EE253 pKa = 3.74QTSRR257 pKa = 11.84LLFRR261 pKa = 11.84SGTAPSGFDD270 pKa = 3.22ALTSPGEE277 pKa = 4.08FSDD280 pKa = 3.66TGAQGFYY287 pKa = 10.19FDD289 pKa = 3.62NVSYY293 pKa = 10.97RR294 pKa = 11.84DD295 pKa = 3.89YY296 pKa = 11.12NQSDD300 pKa = 3.76PSATLASYY308 pKa = 10.55AATFEE313 pKa = 4.25TQPAVTYY320 pKa = 10.52ANPAWSSLATGDD332 pKa = 5.02PITDD336 pKa = 4.28ADD338 pKa = 4.47PLTAGDD344 pKa = 3.76QPATYY349 pKa = 9.84GVNAFATITDD359 pKa = 3.53AVTAVAAGGTVIANAGTYY377 pKa = 10.26AEE379 pKa = 4.44NVTINKK385 pKa = 9.24PLTLEE390 pKa = 4.52GQSSTNTVIEE400 pKa = 4.46PGLTSSYY407 pKa = 9.75NTDD410 pKa = 2.93NVVTVLANNVTVEE423 pKa = 3.99GFTIQGSITGTPPVGQSSGFTLSSGTTVYY452 pKa = 10.84AAAGISNSADD462 pKa = 3.36VTSTATDD469 pKa = 3.1ISGLTVQNNVIKK481 pKa = 10.73DD482 pKa = 3.56FTQFGVDD489 pKa = 3.46GDD491 pKa = 4.2TSSGAVSTGNTIANNVIQDD510 pKa = 3.52IPEE513 pKa = 4.31NNPGSGFYY521 pKa = 10.62GQGVVVADD529 pKa = 3.6NFYY532 pKa = 11.3AAITGNTITNVRR544 pKa = 11.84TGIQTDD550 pKa = 3.37NNYY553 pKa = 9.63TSAGAFAPSISNNIVSATVKK573 pKa = 10.64GIYY576 pKa = 10.46LNLQYY581 pKa = 11.07SAASPFAITGNTITQADD598 pKa = 4.31GTVSPAYY605 pKa = 10.28NVGLLVQSIYY615 pKa = 11.42NGVTTNIQGNNVSGFLYY632 pKa = 10.2GVEE635 pKa = 4.11FAGNSATTPVEE646 pKa = 4.19VQGGTLSGNTYY657 pKa = 10.28GVWATNNDD665 pKa = 3.2YY666 pKa = 10.72FYY668 pKa = 10.24PANFNTTAALSGVAITDD685 pKa = 3.67SKK687 pKa = 9.86TAAIWVDD694 pKa = 3.41STSQSMAGTSDD705 pKa = 3.2TTDD708 pKa = 3.24TVSLAVGGGTTVTGGPTGLLIAGSLSNITGNALGTVSFAGVSGDD752 pKa = 5.36DD753 pKa = 3.12ITLAAGALVGQTLDD767 pKa = 3.57ATAATYY773 pKa = 10.82DD774 pKa = 3.97GVVGTAATPTQGYY787 pKa = 10.22AIADD791 pKa = 3.85KK792 pKa = 10.37VTDD795 pKa = 4.34YY796 pKa = 11.23IDD798 pKa = 3.73NPALGFVRR806 pKa = 11.84ITPATVYY813 pKa = 7.48VTPKK817 pKa = 10.35SEE819 pKa = 4.11STTAGAVQRR828 pKa = 11.84GVTAAANNDD837 pKa = 3.89TVDD840 pKa = 3.63VAAGTYY846 pKa = 10.33AEE848 pKa = 4.49NVTINKK854 pKa = 9.25PLTLEE859 pKa = 4.6GEE861 pKa = 4.41SSANTVIEE869 pKa = 4.41PGLTSSYY876 pKa = 9.75NTDD879 pKa = 2.93NVVTVLANDD888 pKa = 3.39VTVEE892 pKa = 3.95GFTIQGSITGTPPVGQSSGFTLSSGTTVYY921 pKa = 10.84AAAGISNSADD931 pKa = 3.36VTSTATDD938 pKa = 3.1ISGLTVQNNVIKK950 pKa = 10.73DD951 pKa = 3.56FTQFGVDD958 pKa = 3.46GDD960 pKa = 4.2TSSGAVSTGNTIANNVIQDD979 pKa = 3.52IPEE982 pKa = 4.31NNPGSGFYY990 pKa = 10.62GQGVVVADD998 pKa = 3.6NFYY1001 pKa = 11.3AAITGNTITNVRR1013 pKa = 11.84TGIQTDD1019 pKa = 3.37NNYY1022 pKa = 9.63TSAGAFAPSISNNIVSATVKK1042 pKa = 10.64GIYY1045 pKa = 10.46LNLQYY1050 pKa = 11.07SAASPFAITGNTITQADD1067 pKa = 4.31GTVSPAYY1074 pKa = 10.28NVGLLVQSIYY1084 pKa = 11.42NGVTTNIQGNNVSGFLYY1101 pKa = 10.2GVEE1104 pKa = 4.11FAGNSATTPVEE1115 pKa = 4.19VQGGTLSGNTYY1126 pKa = 10.28GVWATNNDD1134 pKa = 3.2YY1135 pKa = 10.72FYY1137 pKa = 10.24PANFNTTAALSGVAITDD1154 pKa = 3.67SKK1156 pKa = 9.86TAAIWVDD1163 pKa = 3.41STSQSMAGTSDD1174 pKa = 3.25TTDD1177 pKa = 3.14SVSLAVGGGTSVTGGPTGLLIAGGLSNITGNALGTVSFAGVTGDD1221 pKa = 5.59DD1222 pKa = 3.15ITLAAGALAGQTLDD1236 pKa = 3.42ATGVTFNGTTGSTATPAQDD1255 pKa = 3.29YY1256 pKa = 11.03AIADD1260 pKa = 4.37KK1261 pKa = 10.14ITDD1264 pKa = 4.81FIDD1267 pKa = 4.46DD1268 pKa = 3.79PTLGFVQITPATVYY1282 pKa = 7.54VTPKK1286 pKa = 10.46SEE1288 pKa = 3.9ATTAGAIPRR1297 pKa = 11.84AVTVASAGDD1306 pKa = 4.1TIDD1309 pKa = 3.61VAAGTYY1315 pKa = 8.49TGNIDD1320 pKa = 3.3LSKK1323 pKa = 10.45NVSVRR1328 pKa = 11.84IDD1330 pKa = 3.71GPSSLTGAISGTTGSITDD1348 pKa = 3.52TLGAVSLGDD1357 pKa = 3.57GSAAGVATSSTLDD1370 pKa = 3.37VNGQTVTLLDD1380 pKa = 3.75SDD1382 pKa = 4.58GADD1385 pKa = 3.69LDD1387 pKa = 4.53GEE1389 pKa = 4.41TDD1391 pKa = 3.66LVGGTLVSANGINVGGTLAGPGTVGAATIQAGGNVEE1427 pKa = 4.24PGGSGTGILNTGNIAFAAGATLTPTLKK1454 pKa = 9.9GTTAGTTYY1462 pKa = 10.91DD1463 pKa = 3.47QVNTTGTVDD1472 pKa = 4.3LGGATLNLNLAFTPAAGDD1490 pKa = 3.28TFTIVNNDD1498 pKa = 2.7GTDD1501 pKa = 3.64PVVGTFAGLPEE1512 pKa = 4.24GSVFKK1517 pKa = 11.01VGSQFFQISYY1527 pKa = 10.53KK1528 pKa = 10.89GGDD1531 pKa = 3.81GNDD1534 pKa = 3.38VTLKK1538 pKa = 10.55AVPSSVLISAPSAAFANDD1556 pKa = 3.26TSTITYY1562 pKa = 7.21TVTYY1566 pKa = 9.73ADD1568 pKa = 4.3PNFASSTLSSGDD1580 pKa = 3.15VTLNTTGTAAVGSVVVSGTGATRR1603 pKa = 11.84TVTLSNITGDD1613 pKa = 3.74GAVGISLPAGTGTDD1627 pKa = 3.22TSSNPEE1633 pKa = 4.01PGAGPSATFTADD1645 pKa = 2.85STAPTVAIGAPSAAFANGTSTVTYY1669 pKa = 9.06TITYY1673 pKa = 8.23TDD1675 pKa = 3.45TNFADD1680 pKa = 3.84STLTPGDD1687 pKa = 3.39VTLNATGDD1695 pKa = 3.65ANATISIDD1703 pKa = 3.43SGTGATRR1710 pKa = 11.84TVTLTHH1716 pKa = 5.09VTGTGTLGISLLADD1730 pKa = 3.48TAVDD1734 pKa = 3.55SAGNEE1739 pKa = 3.75APAAGPSGTFTADD1752 pKa = 2.97TTNPTVVIGAPSAATANAGSTITYY1776 pKa = 7.58TITYY1780 pKa = 9.67SDD1782 pKa = 3.81TNFDD1786 pKa = 3.74QSTLTAADD1794 pKa = 3.39VTLNTTGTASATVTVDD1810 pKa = 3.2GGAGATRR1817 pKa = 11.84TVTLTHH1823 pKa = 5.96ITGDD1827 pKa = 3.47GTLGISLAAGTAHH1840 pKa = 7.56DD1841 pKa = 4.43LAGNEE1846 pKa = 4.27APVAGPSGTFTVDD1859 pKa = 2.87TTAPTVAIGAPSAALANAASTVTFTVTYY1887 pKa = 10.89ADD1889 pKa = 3.74ANFAASTLTAADD1901 pKa = 3.43VTLNTTGTAAGTVSVSGSGTTWTVTVTGITGDD1933 pKa = 3.53GTLGISLAAGTASDD1947 pKa = 3.8TAGNLAPAAGPSATFTVDD1965 pKa = 2.97DD1966 pKa = 4.05TAPTVSISPPSVTVANGSSTVTYY1989 pKa = 9.33TVTYY1993 pKa = 10.78ADD1995 pKa = 4.39ANFADD2000 pKa = 4.28STLTAADD2007 pKa = 3.44VTLNATGTASATVSVDD2023 pKa = 3.01SGSGTTRR2030 pKa = 11.84TVTLTHH2036 pKa = 5.96ITGDD2040 pKa = 3.47GTLGISLAAGTAHH2053 pKa = 7.11DD2054 pKa = 4.52QLSDD2058 pKa = 3.73PAPAAGPSGTFAVDD2072 pKa = 3.45TTAPTVAIGNPSVAITNGSSTVTYY2096 pKa = 9.6TITYY2100 pKa = 10.04SDD2102 pKa = 4.03ANFAASTLTAADD2114 pKa = 3.43VTLNTTGTATATVSVDD2130 pKa = 2.9SGTGTTRR2137 pKa = 11.84TITLSNITGDD2147 pKa = 3.48GTLGISLVAGTASDD2161 pKa = 3.48AAEE2164 pKa = 4.33NLAPAAGPSGTFAVDD2179 pKa = 3.45TTAPTVTISSPAVTGAGAAEE2199 pKa = 4.23VVTYY2203 pKa = 9.3TITYY2207 pKa = 10.34ADD2209 pKa = 4.01ANFADD2214 pKa = 4.28STLTAADD2221 pKa = 3.44VTLNATGGTTASVAVSGTGTTRR2243 pKa = 11.84TVTLTHH2249 pKa = 6.03ITGSGTVGISLVSGTAVDD2267 pKa = 3.61TAGNLAPAAGPSATAAAVPVDD2288 pKa = 4.07ANAVGQFAASPDD2300 pKa = 3.59AGGSGIVTVYY2310 pKa = 10.75NADD2313 pKa = 3.16GSVAYY2318 pKa = 8.44TVNPFPGVGAQTGVRR2333 pKa = 11.84AVMAGVTGSATPDD2346 pKa = 3.43VIAGTGPGVRR2356 pKa = 11.84AQVVVVSGTTHH2367 pKa = 5.92AVVMTLNPFEE2377 pKa = 5.56DD2378 pKa = 4.21SFTGGVFVAAADD2390 pKa = 4.12LNGDD2394 pKa = 3.6GHH2396 pKa = 8.59ADD2398 pKa = 2.99IVVSPDD2404 pKa = 2.88VGGGGRR2410 pKa = 11.84ITVYY2414 pKa = 10.72DD2415 pKa = 3.89GATGQVIANFFGIDD2429 pKa = 3.37DD2430 pKa = 3.83PAFRR2434 pKa = 11.84GGARR2438 pKa = 11.84VSFGDD2443 pKa = 3.56VNGDD2447 pKa = 3.63GVPDD2451 pKa = 4.93LIVSAGTGGGPRR2463 pKa = 11.84VAIFDD2468 pKa = 3.69GRR2470 pKa = 11.84SIGLGKK2476 pKa = 8.74TPTKK2480 pKa = 10.53LVADD2484 pKa = 5.11FFAFEE2489 pKa = 3.85PSLRR2493 pKa = 11.84NGAYY2497 pKa = 9.55VAAGDD2502 pKa = 4.18FNGDD2506 pKa = 3.09GYY2508 pKa = 11.81ADD2510 pKa = 4.2LVAGGGPDD2518 pKa = 3.31GAPRR2522 pKa = 11.84VEE2524 pKa = 4.3VLDD2527 pKa = 4.25GASLLSSNGQAPTMVANFFAGDD2549 pKa = 3.42PSLRR2553 pKa = 11.84SGARR2557 pKa = 11.84VAVKK2561 pKa = 10.56NLDD2564 pKa = 3.58GDD2566 pKa = 4.11GSADD2570 pKa = 3.72LVVGLATGTGTQVATYY2586 pKa = 10.0LGKK2589 pKa = 10.33DD2590 pKa = 3.41LTASGTPTAAAEE2602 pKa = 4.1LDD2604 pKa = 3.93PFPGFTGGVFVGG2616 pKa = 4.17

Molecular weight: 257.72 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A225DK67|A0A225DK67_9BACT Zinc protease OS=Fimbriiglobus ruber OX=1908690 GN=FRUB_06709 PE=4 SV=1
MM1 pKa = 7.5SFPRR5 pKa = 11.84KK6 pKa = 8.37FTGNLSVRR14 pKa = 11.84PVRR17 pKa = 11.84RR18 pKa = 11.84PAPGPRR24 pKa = 11.84WRR26 pKa = 11.84HH27 pKa = 4.8CWVTSWLGTGADD39 pKa = 3.47SRR41 pKa = 11.84RR42 pKa = 11.84VRR44 pKa = 11.84TRR46 pKa = 11.84RR47 pKa = 11.84PRR49 pKa = 11.84GTKK52 pKa = 10.06SPTALRR58 pKa = 11.84GSARR62 pKa = 11.84GNRR65 pKa = 11.84RR66 pKa = 11.84TARR69 pKa = 11.84PRR71 pKa = 11.84ASPAARR77 pKa = 11.84FVRR80 pKa = 11.84GGWW83 pKa = 3.16

Molecular weight: 9.41 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10212

0

10212

3250331

37

8355

318.3

34.49

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.72 ± 0.04

0.981 ± 0.009

5.925 ± 0.02

5.172 ± 0.028

3.558 ± 0.017

8.793 ± 0.043

2.015 ± 0.015

3.848 ± 0.019

3.852 ± 0.032

9.365 ± 0.039

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.712 ± 0.013

2.801 ± 0.024

6.283 ± 0.025

3.08 ± 0.016

7.132 ± 0.046

5.17 ± 0.036

6.565 ± 0.062

8.092 ± 0.024

1.524 ± 0.012

2.412 ± 0.015
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski