Paxillus involutus ATCC 200175

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Boletales; Paxilineae; Paxillaceae; Paxillus; Paxillus involutus

Average proteome isoelectric point is 6.55

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11689 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C9TB44|A0A0C9TB44_PAXIN Unplaced genomic scaffold PAXINscaffold_37 whole genome shotgun sequence OS=Paxillus involutus ATCC 200175 OX=664439 GN=PAXINDRAFT_156773 PE=4 SV=1
MM1 pKa = 7.43INVFTSLLDD10 pKa = 3.53VGPTAEE16 pKa = 4.51GEE18 pKa = 4.44IIAPMADD25 pKa = 3.08NLLAAGKK32 pKa = 7.26WLKK35 pKa = 10.55YY36 pKa = 10.4AGEE39 pKa = 4.34CVYY42 pKa = 10.45ATDD45 pKa = 3.29YY46 pKa = 10.46WYY48 pKa = 8.27QTSQDD53 pKa = 3.52PTGSFRR59 pKa = 11.84FLTTPQTFCIVAFNKK74 pKa = 7.34PTNGSVVVNAGGVVLPIQQGDD95 pKa = 4.38AIRR98 pKa = 11.84LLGPNSPGVFSDD110 pKa = 3.58DD111 pKa = 3.05TTAQTSGLEE120 pKa = 3.74WRR122 pKa = 11.84MDD124 pKa = 3.51EE125 pKa = 5.65DD126 pKa = 4.11GVLTIDD132 pKa = 3.83VPEE135 pKa = 4.58DD136 pKa = 3.19QVDD139 pKa = 3.72QVDD142 pKa = 4.18YY143 pKa = 10.82AWAFQVSYY151 pKa = 11.67ALFF154 pKa = 4.12

Molecular weight: 16.74 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C9SN70|A0A0C9SN70_PAXIN Unplaced genomic scaffold PAXINscaffold_580 whole genome shotgun sequence (Fragment) OS=Paxillus involutus ATCC 200175 OX=664439 GN=PAXINDRAFT_90432 PE=4 SV=1
MM1 pKa = 7.27AQHH4 pKa = 6.07FHH6 pKa = 6.16FALRR10 pKa = 11.84ALAYY14 pKa = 9.94VAISLCPCFRR24 pKa = 11.84QVIVTSPGVNGAVRR38 pKa = 11.84LLVNILGWNEE48 pKa = 4.03SLSLLSSRR56 pKa = 11.84FCNILEE62 pKa = 4.31AFHH65 pKa = 6.68SRR67 pKa = 11.84LHH69 pKa = 5.35IVARR73 pKa = 11.84QTQQNGVASVDD84 pKa = 3.38ASVDD88 pKa = 3.72SLHH91 pKa = 6.97LISLRR96 pKa = 11.84LILPRR101 pKa = 11.84YY102 pKa = 8.27LARR105 pKa = 11.84SPTQAHH111 pKa = 6.21RR112 pKa = 11.84AKK114 pKa = 10.72FSIPPFILVFGKK126 pKa = 8.83ATSTGVHH133 pKa = 5.97SPSCASYY140 pKa = 10.39HH141 pKa = 6.0RR142 pKa = 11.84HH143 pKa = 5.69TGPLKK148 pKa = 10.73DD149 pKa = 3.67VTLSASVLNTATYY162 pKa = 10.81CLARR166 pKa = 11.84PPKK169 pKa = 10.09QSPDD173 pKa = 3.01PSFGVFYY180 pKa = 10.6WEE182 pKa = 4.03TSLVHH187 pKa = 6.29LAGILIPGCRR197 pKa = 11.84SSSRR201 pKa = 11.84PPQHH205 pKa = 5.41WKK207 pKa = 9.03MLIVSQDD214 pKa = 3.24RR215 pKa = 11.84LIGGLTQTVSEE226 pKa = 4.71GARR229 pKa = 11.84TRR231 pKa = 11.84SPARR235 pKa = 11.84FMVDD239 pKa = 2.99AARR242 pKa = 11.84TEE244 pKa = 4.29TGATLPQYY252 pKa = 11.13KK253 pKa = 8.75STTEE257 pKa = 3.73AMSTSHH263 pKa = 6.56SPHH266 pKa = 7.5SMQTWHH272 pKa = 6.15SRR274 pKa = 11.84KK275 pKa = 10.2GSTSFPAISVPPTTVVAIMVHH296 pKa = 6.5PEE298 pKa = 4.0SLHH301 pKa = 6.53CLAQSRR307 pKa = 11.84FGYY310 pKa = 10.11LPPIRR315 pKa = 11.84IASRR319 pKa = 11.84RR320 pKa = 11.84ACPEE324 pKa = 3.74EE325 pKa = 4.03DD326 pKa = 3.5TGDD329 pKa = 3.71LTAVWAQEE337 pKa = 3.71WPAPSIGGRR346 pKa = 11.84PCRR349 pKa = 11.84NNGRR353 pKa = 11.84RR354 pKa = 11.84KK355 pKa = 9.37FLVVSRR361 pKa = 11.84RR362 pKa = 11.84MNLPLKK368 pKa = 10.11QAA370 pKa = 3.81

Molecular weight: 40.63 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11649

40

11689

3729177

49

3922

319.0

35.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.115 ± 0.023

1.523 ± 0.012

5.634 ± 0.019

5.898 ± 0.023

3.657 ± 0.016

6.471 ± 0.02

2.965 ± 0.013

4.856 ± 0.016

4.434 ± 0.019

9.165 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.14 ± 0.01

3.46 ± 0.013

6.439 ± 0.031

3.862 ± 0.014

6.13 ± 0.024

8.422 ± 0.03

6.18 ± 0.018

6.471 ± 0.016

1.604 ± 0.012

2.576 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski